RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 ST3GAL6Q9Y274 331 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 RBP4P02753 201 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 OR1J1Q8NGS3 322 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 SHISA4Q96DD7 197 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 FGF22Q9HCT0 170 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 HIVEP3Q5T1R4 2406 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 TRAV38-1A0A0B4J264 116 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 PPIHO43447 177 aaKnown RBP8.72□□□□□ -1.01
CUX1-203ENST00000360264 ADPRHL1Q8NDY3 354 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 ANGPTL6Q8NI99 470 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 ADTRPQ96IZ2 230 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 ASH2LQ9UBL3 628 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 CLEC2DQ9UHP7 191 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 MUC4Q99102 2169 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 METTL12A8MUP2 240 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 GJB3O75712 270 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 SLC19A1P41440 591 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 CLDN20P56880 219 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 OR11G2Q8NGC1 345 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 OR2A5Q96R48 311 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 NIPSNAP1Q9BPW8 284 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 ADAT1Q9BUB4 502 aaKnown RBP8.72□□□□□ -1.01
CUX1-203ENST00000360264 MUC6Q6W4X9 2439 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 IZUMO4Q1ZYL8 232 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 RPUSD4Q96CM3 377 aaKnown RBP8.72□□□□□ -1.01
CUX1-203ENST00000360264 TEX101Q9BY14 249 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 TRNP1Q6NT89 227 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 WDR73Q6P4I2 378 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 ZNF788Q6ZQV5 615 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 UBE3DQ7Z6J8 389 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 TMEM231Q9H6L2 316 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 IL36GQ9NZH8 169 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 PPP6CO00743 305 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 TNFSF14O43557 240 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 Q6ZPB1 254 aaPredicted RBP8.72□□□□□ -1.01
CUX1-203ENST00000360264 HINT3Q9NQE9 182 aaKnown RBP8.72□□□□□ -1.01
CUX1-203ENST00000360264 OR1A1Q9P1Q5 309 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 HOXC4P09017 264 aaPredicted RBP8.72□□□□□ -1.01
CUX1-203ENST00000360264 GABRA1P14867 456 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 ACVR1Q04771 509 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 RNF151Q2KHN1 245 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 TEX37Q96LM6 180 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 EMC6Q9BV81 110 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 SCAND1P57086 179 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 TMEM267Q0VDI3 215 aaPredicted RBP8.72□□□□□ -1.01
CUX1-203ENST00000360264 ATP6V1FQ16864 119 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 SFTPA2Q8IWL1 248 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 SFTPA1Q8IWL2 248 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 ADGRG7Q96K78 797 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 PDCD11Q14690 1871 aaKnown RBP8.72□□□□□ -1.01
CUX1-203ENST00000360264 LCN15Q6UWW0 184 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 OSR2Q8N2R0 312 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 C11orf42Q8N5U0 333 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 SLC24A4Q8NFF2 622 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 OR52N4Q8NGI2 321 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 A4GNTQ9UNA3 340 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 PAPPA2Q9BXP8 1791 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 DCTN6O00399 190 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 CDX4O14627 284 aaPredicted RBP8.72□□□□□ -1.01
CUX1-203ENST00000360264 GCAP28676 217 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 OR2Z1Q8NG97 314 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 OTOSQ8NHW6 89 aa8.72□□□□□ -1.01
CUX1-203ENST00000360264 PDGFAP04085 211 aa8.71□□□□□ -1.01
CUX1-203ENST00000360264 STAC2Q6ZMT1 411 aa8.71□□□□□ -1.01
CUX1-203ENST00000360264 ADIPOR1Q96A54 375 aa8.71□□□□□ -1.01
CUX1-203ENST00000360264 C7orf72A4D263 438 aa8.71□□□□□ -1.01
CUX1-203ENST00000360264 SIX6O95475 246 aa8.71□□□□□ -1.01
CUX1-203ENST00000360264 TUSC1Q2TAM9 212 aa8.71□□□□□ -1.01
CUX1-203ENST00000360264 TMEM240Q5SV17 173 aa8.71□□□□□ -1.01
CUX1-203ENST00000360264 ACSM5Q6NUN0 579 aa8.71□□□□□ -1.01
CUX1-203ENST00000360264 C8orf44Q96CB5 159 aa8.71□□□□□ -1.01
CUX1-203ENST00000360264 WNT16Q9UBV4 365 aa8.71□□□□□ -1.01
CUX1-203ENST00000360264 KMT2EQ8IZD2 1858 aa8.71□□□□□ -1.01
CUX1-203ENST00000360264 GREB1Q4ZG55 1949 aa8.71□□□□□ -1.01
CUX1-203ENST00000360264 OR5B21A6NL26 309 aa8.71□□□□□ -1.01
CUX1-203ENST00000360264 NME2P1O60361 137 aa8.71□□□□□ -1.01
CUX1-203ENST00000360264 CBR1P16152 277 aa8.71□□□□□ -1.01
CUX1-203ENST00000360264 ZNF26P17031 533 aaPredicted RBP8.71□□□□□ -1.01
CUX1-203ENST00000360264 HNF1AP20823 631 aa8.71□□□□□ -1.01
CUX1-203ENST00000360264 PDZK1IP1Q13113 114 aa8.71□□□□□ -1.01
CUX1-203ENST00000360264 STXBP6Q8NFX7 210 aa8.71□□□□□ -1.01
CUX1-203ENST00000360264 OR4D9Q8NGE8 314 aa8.71□□□□□ -1.01
CUX1-203ENST00000360264 OR6S1Q8NH40 331 aa8.71□□□□□ -1.01
CUX1-203ENST00000360264 NKX6-2Q9C056 277 aaPredicted RBP8.71□□□□□ -1.01
CUX1-203ENST00000360264 MYO9AB2RTY4 2548 aa8.71□□□□□ -1.01
CUX1-203ENST00000360264 OR52L2PQ8NGH6 319 aa8.71□□□□□ -1.01
CUX1-203ENST00000360264 NUPL2O15504 423 aaKnown RBP8.71□□□□□ -1.02
CUX1-203ENST00000360264 C1orf174Q8IYL3 243 aa8.71□□□□□ -1.02
CUX1-203ENST00000360264 TMED6Q8WW62 240 aa8.71□□□□□ -1.02
CUX1-203ENST00000360264 RHOFQ9HBH0 211 aa8.71□□□□□ -1.02
CUX1-203ENST00000360264 FOCADQ5VW36 1801 aa8.71□□□□□ -1.02
CUX1-203ENST00000360264 PRRT4C9JH25 899 aa8.71□□□□□ -1.02
CUX1-203ENST00000360264 GP1BAP07359 652 aa8.71□□□□□ -1.02
CUX1-203ENST00000360264 PCBP4P57723 403 aaKnown RBP8.71□□□□□ -1.02
CUX1-203ENST00000360264 DLEU7Q6UYE1 221 aa8.71□□□□□ -1.02
CUX1-203ENST00000360264 BAP18Q8IXM2 172 aa8.71□□□□□ -1.02
CUX1-203ENST00000360264 DPF1Q92782 380 aa8.71□□□□□ -1.02
CUX1-203ENST00000360264 TRMT61AQ96FX7 289 aaKnown RBP8.71□□□□□ -1.02
CUX1-203ENST00000360264 SEC11CQ9BY50 192 aa8.71□□□□□ -1.02
CUX1-203ENST00000360264 ATAD5Q96QE3 1844 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms