RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 OR51E2Q9H255 320 aa12.6□□□□□ -0.39
CCNE1-202ENST00000357943 ZCCHC4Q9H5U6 513 aa12.6□□□□□ -0.39
CCNE1-202ENST00000357943 SAP30LQ9HAJ7 183 aa12.6□□□□□ -0.39
CCNE1-202ENST00000357943 ZNF701Q9NV72 531 aaPredicted RBP12.6□□□□□ -0.39
CCNE1-202ENST00000357943 TRAV8-7A0A075B6U6 113 aa12.59□□□□□ -0.39
CCNE1-202ENST00000357943 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.59□□□□□ -0.39
CCNE1-202ENST00000357943 MAPK3P27361 379 aaPredicted RBP12.59□□□□□ -0.39
CCNE1-202ENST00000357943 CD200P41217 278 aa12.59□□□□□ -0.39
CCNE1-202ENST00000357943 MPPED2Q15777 294 aa12.59□□□□□ -0.39
CCNE1-202ENST00000357943 PRAMEF6Q5VXH4 476 aa12.59□□□□□ -0.39
CCNE1-202ENST00000357943 ZNF529Q6P280 563 aa12.59□□□□□ -0.39
CCNE1-202ENST00000357943 SPERTQ8NA61 448 aa12.59□□□□□ -0.39
CCNE1-202ENST00000357943 OR5A2Q8NGI9 324 aa12.59□□□□□ -0.39
CCNE1-202ENST00000357943 TRMT10AQ8TBZ6 339 aaKnown RBP12.59□□□□□ -0.39
CCNE1-202ENST00000357943 ISOC1Q96CN7 298 aa12.59□□□□□ -0.39
CCNE1-202ENST00000357943 PERPQ96FX8 193 aa12.59□□□□□ -0.39
CCNE1-202ENST00000357943 RNF170Q96K19 258 aa12.59□□□□□ -0.39
CCNE1-202ENST00000357943 MICU1Q9BPX6 476 aa12.59□□□□□ -0.39
CCNE1-202ENST00000357943 FUNDC2Q9BWH2 189 aa12.59□□□□□ -0.39
CCNE1-202ENST00000357943 NAA50Q9GZZ1 169 aaKnown RBP12.59□□□□□ -0.39
CCNE1-202ENST00000357943 CXXC4Q9H2H0 198 aa12.59□□□□□ -0.39
CCNE1-202ENST00000357943 ABCB9Q9NP78 766 aa12.59□□□□□ -0.39
CCNE1-202ENST00000357943 EDARQ9UNE0 448 aa12.59□□□□□ -0.39
CCNE1-202ENST00000357943 NAV2Q8IVL1 2488 aa12.59□□□□□ -0.39
CCNE1-202ENST00000357943 ZNF732B4DXR9 585 aa12.59□□□□□ -0.39
CCNE1-202ENST00000357943 SULT1B1O43704 296 aa12.59□□□□□ -0.39
CCNE1-202ENST00000357943 GPX5O75715 221 aa12.59□□□□□ -0.39
CCNE1-202ENST00000357943 IGHV4-39P01824 125 aa12.59□□□□□ -0.39
CCNE1-202ENST00000357943 GRPP07492 148 aa12.59□□□□□ -0.39
CCNE1-202ENST00000357943 ERCC1P07992 297 aaPredicted RBP12.59□□□□□ -0.39
CCNE1-202ENST00000357943 IGFBP3P17936 291 aaPredicted RBP12.59□□□□□ -0.39
CCNE1-202ENST00000357943 ATF1P18846 271 aa12.59□□□□□ -0.39
CCNE1-202ENST00000357943 GADD45AP24522 165 aa12.59□□□□□ -0.39
CCNE1-202ENST00000357943 TMBIM6P55061 237 aa12.59□□□□□ -0.39
CCNE1-202ENST00000357943 ZNF154Q13106 437 aa12.59□□□□□ -0.39
CCNE1-202ENST00000357943 DEFB113Q30KQ7 82 aa12.59□□□□□ -0.39
CCNE1-202ENST00000357943 ANKRD13BQ86YJ7 626 aa12.59□□□□□ -0.39
CCNE1-202ENST00000357943 TGIF2LYQ8IUE0 185 aa12.59□□□□□ -0.39
CCNE1-202ENST00000357943 NEU4Q8WWR8 484 aaPredicted RBP12.59□□□□□ -0.39
CCNE1-202ENST00000357943 NINJ1Q92982 152 aa12.59□□□□□ -0.39
CCNE1-202ENST00000357943 TSC22D3Q99576 134 aa12.59□□□□□ -0.39
CCNE1-202ENST00000357943 RTL8AQ9BWD3 113 aa12.59□□□□□ -0.39
CCNE1-202ENST00000357943 TREM2Q9NZC2 230 aa12.59□□□□□ -0.39
CCNE1-202ENST00000357943 STUB1Q9UNE7 303 aa12.59□□□□□ -0.39
CCNE1-202ENST00000357943 CACNG2Q9Y698 323 aa12.59□□□□□ -0.39
CCNE1-202ENST00000357943 ZNF469Q96JG9 3925 aaPredicted RBP12.58□□□□□ -0.4
CCNE1-202ENST00000357943 TRDV1A0A1B0GX56 115 aa12.58□□□□□ -0.4
CCNE1-202ENST00000357943 FAM230AA0A1W2PPH8 454 aa12.58□□□□□ -0.4
CCNE1-202ENST00000357943 LYNX1G3V0Z9 82 aa12.58□□□□□ -0.4
CCNE1-202ENST00000357943 CDC14BO60729 498 aa12.58□□□□□ -0.4
CCNE1-202ENST00000357943 F12P00748 615 aaPredicted RBP12.58□□□□□ -0.4
CCNE1-202ENST00000357943 UCHL1P09936 223 aa12.58□□□□□ -0.4
CCNE1-202ENST00000357943 LYNX1P0DP58 116 aa12.58□□□□□ -0.4
CCNE1-202ENST00000357943 PAX1P15863 534 aa12.58□□□□□ -0.4
CCNE1-202ENST00000357943 FSTP19883 344 aa12.58□□□□□ -0.4
CCNE1-202ENST00000357943 RAB3AP20336 220 aa12.58□□□□□ -0.4
CCNE1-202ENST00000357943 AZGP1P25311 298 aaKnown RBP12.58□□□□□ -0.4
CCNE1-202ENST00000357943 PTH2RP49190 550 aa12.58□□□□□ -0.4
CCNE1-202ENST00000357943 SRP9P49458 86 aaKnown RBP12.58□□□□□ -0.4
CCNE1-202ENST00000357943 EFNA4P52798 201 aa12.58□□□□□ -0.4
CCNE1-202ENST00000357943 ATP5J2P56134 94 aa12.58□□□□□ -0.4
CCNE1-202ENST00000357943 GNG3P63215 75 aa12.58□□□□□ -0.4
CCNE1-202ENST00000357943 CNN3Q15417 329 aaKnown RBP12.58□□□□□ -0.4
CCNE1-202ENST00000357943 TESK1Q15569 626 aa12.58□□□□□ -0.4
CCNE1-202ENST00000357943 HSD17B12Q53GQ0 312 aa12.58□□□□□ -0.4
CCNE1-202ENST00000357943 FAM76BQ5HYJ3 339 aa12.58□□□□□ -0.4
CCNE1-202ENST00000357943 RNF144BQ7Z419 303 aa12.58□□□□□ -0.4
CCNE1-202ENST00000357943 CDH24Q86UP0 819 aa12.58□□□□□ -0.4
CCNE1-202ENST00000357943 CELF2-AS1Q8N7Q2 184 aa12.58□□□□□ -0.4
CCNE1-202ENST00000357943 OR1M1Q8NGA1 313 aa12.58□□□□□ -0.4
CCNE1-202ENST00000357943 THRSPQ92748 146 aa12.58□□□□□ -0.4
CCNE1-202ENST00000357943 RPL3LQ92901 407 aaKnown RBP12.58□□□□□ -0.4
CCNE1-202ENST00000357943 TECTBQ96PL2 329 aa12.58□□□□□ -0.4
CCNE1-202ENST00000357943 SPACA5Q96QH8 159 aa12.58□□□□□ -0.4
CCNE1-202ENST00000357943 GSX2Q9BZM3 304 aa12.58□□□□□ -0.4
CCNE1-202ENST00000357943 EGLN1Q9GZT9 426 aa12.58□□□□□ -0.4
CCNE1-202ENST00000357943 GCM1Q9NP62 436 aa12.58□□□□□ -0.4
CCNE1-202ENST00000357943 EXOSC4Q9NPD3 245 aaKnown RBP12.58□□□□□ -0.4
CCNE1-202ENST00000357943 UFSP2Q9NUQ7 469 aa12.58□□□□□ -0.4
CCNE1-202ENST00000357943 C14orf119Q9NWQ9 140 aa12.58□□□□□ -0.4
CCNE1-202ENST00000357943 SLC7A11Q9UPY5 501 aa12.58□□□□□ -0.4
CCNE1-202ENST00000357943 IGKV1-27A0A075B6S5 117 aa12.57□□□□□ -0.4
CCNE1-202ENST00000357943 PQLC2LA1A4F0 135 aa12.57□□□□□ -0.4
CCNE1-202ENST00000357943 OR5B21A6NL26 309 aa12.57□□□□□ -0.4
CCNE1-202ENST00000357943 ALX3O95076 343 aa12.57□□□□□ -0.4
CCNE1-202ENST00000357943 PTBP3O95758 552 aaKnown RBP12.57□□□□□ -0.4
CCNE1-202ENST00000357943 OCMP0CE72 109 aaPredicted RBP12.57□□□□□ -0.4
CCNE1-202ENST00000357943 TNFRSF1AP19438 455 aa12.57□□□□□ -0.4
CCNE1-202ENST00000357943 COL8A2P25067 703 aa12.57□□□□□ -0.4
CCNE1-202ENST00000357943 FUT6P51993 359 aa12.57□□□□□ -0.4
CCNE1-202ENST00000357943 C22orf42Q6IC83 251 aa12.57□□□□□ -0.4
CCNE1-202ENST00000357943 SLC16A12Q6ZSM3 486 aa12.57□□□□□ -0.4
CCNE1-202ENST00000357943 SPSB1Q96BD6 273 aa12.57□□□□□ -0.4
CCNE1-202ENST00000357943 C12orf43Q96C57 262 aaKnown RBP12.57□□□□□ -0.4
CCNE1-202ENST00000357943 MBD6Q96DN6 1003 aa12.57□□□□□ -0.4
CCNE1-202ENST00000357943 BORCS8Q96FH0 119 aa12.57□□□□□ -0.4
CCNE1-202ENST00000357943 CHCHD6Q9BRQ6 235 aa12.57□□□□□ -0.4
CCNE1-202ENST00000357943 BEX4Q9NWD9 120 aaPredicted RBP12.57□□□□□ -0.4
CCNE1-202ENST00000357943 TXNL4BQ9NX01 149 aaKnown RBP12.57□□□□□ -0.4
CCNE1-202ENST00000357943 CKLFQ9UBR5 152 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms