RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 INSL4Q14641 139 aa18.7■□□□□ 0.58
SHMT1-203ENST00000354098 ARMCX4Q5H9R4 360 aa18.7■□□□□ 0.58
SHMT1-203ENST00000354098 ZNF826PQ6ZT77 177 aa18.7■□□□□ 0.58
SHMT1-203ENST00000354098 C11orf53Q8IXP5 236 aa18.7■□□□□ 0.58
SHMT1-203ENST00000354098 OR1M1Q8NGA1 313 aa18.7■□□□□ 0.58
SHMT1-203ENST00000354098 OR5A2Q8NGI9 324 aa18.7■□□□□ 0.58
SHMT1-203ENST00000354098 C10orf105Q8TEF2 133 aa18.7■□□□□ 0.58
SHMT1-203ENST00000354098 PP6455Q8WZ26 134 aa18.7■□□□□ 0.58
SHMT1-203ENST00000354098 TMEM106AQ96A25 262 aa18.7■□□□□ 0.58
SHMT1-203ENST00000354098 CHODLQ9H9P2 273 aa18.7■□□□□ 0.58
SHMT1-203ENST00000354098 DLL4Q9NR61 685 aa18.7■□□□□ 0.58
SHMT1-203ENST00000354098 IGKV1-9A0A0C4DH69 117 aa18.69■□□□□ 0.58
SHMT1-203ENST00000354098 INMTO95050 263 aa18.69■□□□□ 0.58
SHMT1-203ENST00000354098 SERPINA3P01011 423 aa18.69■□□□□ 0.58
SHMT1-203ENST00000354098 CPEP16870 476 aa18.69■□□□□ 0.58
SHMT1-203ENST00000354098 MZT1Q08AG7 82 aa18.69■□□□□ 0.58
SHMT1-203ENST00000354098 GPR50Q13585 617 aa18.69■□□□□ 0.58
SHMT1-203ENST00000354098 RIN1Q13671 783 aa18.69■□□□□ 0.58
SHMT1-203ENST00000354098 ASPHD2Q6ICH7 369 aa18.69■□□□□ 0.58
SHMT1-203ENST00000354098 PARP16Q8N5Y8 322 aa18.69■□□□□ 0.58
SHMT1-203ENST00000354098 TRMT10AQ8TBZ6 339 aaKnown RBP18.69■□□□□ 0.58
SHMT1-203ENST00000354098 TMEM203Q969S6 136 aa18.69■□□□□ 0.58
SHMT1-203ENST00000354098 OR14A2Q96R54 314 aa18.69■□□□□ 0.58
SHMT1-203ENST00000354098 TMEM106BQ9NUM4 274 aa18.69■□□□□ 0.58
SHMT1-203ENST00000354098 HOXA4Q00056 320 aaPredicted RBP18.69■□□□□ 0.58
SHMT1-203ENST00000354098 Q499Y3 187 aa18.69■□□□□ 0.58
SHMT1-203ENST00000354098 FAM76BQ5HYJ3 339 aa18.69■□□□□ 0.58
SHMT1-203ENST00000354098 UTS2BQ765I0 119 aa18.69■□□□□ 0.58
SHMT1-203ENST00000354098 SERPINA12Q8IW75 414 aa18.69■□□□□ 0.58
SHMT1-203ENST00000354098 PHC2Q8IXK0 858 aa18.69■□□□□ 0.58
SHMT1-203ENST00000354098 OR13C9Q8NGT0 318 aa18.69■□□□□ 0.58
SHMT1-203ENST00000354098 RPL3LQ92901 407 aaKnown RBP18.69■□□□□ 0.58
SHMT1-203ENST00000354098 NR1H4Q96RI1 486 aaPredicted RBP18.69■□□□□ 0.58
SHMT1-203ENST00000354098 A0A1W2PPK0 400 aa18.68■□□□□ 0.58
SHMT1-203ENST00000354098 TRIM64BA6NI03 449 aa18.68■□□□□ 0.58
SHMT1-203ENST00000354098 A6NLC8 198 aa18.68■□□□□ 0.58
SHMT1-203ENST00000354098 GATBO75879 557 aaKnown RBP18.68■□□□□ 0.58
SHMT1-203ENST00000354098 CYB5R3P00387 301 aaPredicted RBP18.68■□□□□ 0.58
SHMT1-203ENST00000354098 DSCR9P59020 149 aa18.68■□□□□ 0.58
SHMT1-203ENST00000354098 RPS25P62851 125 aaKnown RBP18.68■□□□□ 0.58
SHMT1-203ENST00000354098 GNG3P63215 75 aa18.68■□□□□ 0.58
SHMT1-203ENST00000354098 NEDD8Q15843 81 aa18.68■□□□□ 0.58
SHMT1-203ENST00000354098 SSX1Q16384 188 aa18.68■□□□□ 0.58
SHMT1-203ENST00000354098 ZCCHC4Q9H5U6 513 aa18.68■□□□□ 0.58
SHMT1-203ENST00000354098 C1orf123Q9NWV4 160 aa18.68■□□□□ 0.58
SHMT1-203ENST00000354098 DYSFO75923 2080 aa18.68■□□□□ 0.58
SHMT1-203ENST00000354098 A0A087WXM4 84 aa18.67■□□□□ 0.58
SHMT1-203ENST00000354098 FAM230AA0A1W2PPH8 454 aa18.67■□□□□ 0.58
SHMT1-203ENST00000354098 PQLC2LA1A4F0 135 aa18.67■□□□□ 0.58
SHMT1-203ENST00000354098 CDIPTO14735 213 aa18.67■□□□□ 0.58
SHMT1-203ENST00000354098 CD2P06729 351 aa18.67■□□□□ 0.58
SHMT1-203ENST00000354098 CSF3P09919 207 aa18.67■□□□□ 0.58
SHMT1-203ENST00000354098 ATF1P18846 271 aa18.67■□□□□ 0.58
SHMT1-203ENST00000354098 GIFP27352 417 aa18.67■□□□□ 0.58
SHMT1-203ENST00000354098 PSMB9P28065 219 aa18.67■□□□□ 0.58
SHMT1-203ENST00000354098 MS4A15Q8N5U1 240 aa18.67■□□□□ 0.58
SHMT1-203ENST00000354098 OR5D14Q8NGL3 314 aa18.67■□□□□ 0.58
SHMT1-203ENST00000354098 FCGR1BQ92637 280 aa18.67■□□□□ 0.58
SHMT1-203ENST00000354098 ERGIC1Q969X5 290 aa18.67■□□□□ 0.58
SHMT1-203ENST00000354098 BPESC1Q9GZL8 116 aa18.67■□□□□ 0.58
SHMT1-203ENST00000354098 OR51I2Q9H344 312 aa18.67■□□□□ 0.58
SHMT1-203ENST00000354098 FN3KRPQ9HA64 309 aa18.67■□□□□ 0.58
SHMT1-203ENST00000354098 TAS2R4Q9NYW5 299 aa18.67■□□□□ 0.58
SHMT1-203ENST00000354098 SF3B6Q9Y3B4 125 aaKnown RBP18.67■□□□□ 0.58
SHMT1-203ENST00000354098 IGKV1-27A0A075B6S5 117 aa18.66■□□□□ 0.58
SHMT1-203ENST00000354098 OR5B21A6NL26 309 aa18.66■□□□□ 0.58
SHMT1-203ENST00000354098 TMEM210A6NLX4 147 aa18.66■□□□□ 0.58
SHMT1-203ENST00000354098 ZNF879B4DU55 563 aa18.66■□□□□ 0.58
SHMT1-203ENST00000354098 PPIHO43447 177 aaKnown RBP18.66■□□□□ 0.58
SHMT1-203ENST00000354098 TMEM33P57088 247 aa18.66■□□□□ 0.58
SHMT1-203ENST00000354098 SCCPDHQ8NBX0 429 aa18.66■□□□□ 0.58
SHMT1-203ENST00000354098 Q8TCH9 128 aa18.66■□□□□ 0.58
SHMT1-203ENST00000354098 TLNRD1Q9H1K6 362 aa18.66■□□□□ 0.58
SHMT1-203ENST00000354098 METTL17Q9H7H0 456 aaPredicted RBP18.66■□□□□ 0.58
SHMT1-203ENST00000354098 SLC7A11Q9UPY5 501 aa18.66■□□□□ 0.58
SHMT1-203ENST00000354098 TANC2Q9HCD6 1990 aa18.66■□□□□ 0.58
SHMT1-203ENST00000354098 VWC2LB2RUY7 222 aa18.66■□□□□ 0.58
SHMT1-203ENST00000354098 TMEM178BH3BS89 294 aa18.66■□□□□ 0.58
SHMT1-203ENST00000354098 NDUFS8O00217 210 aa18.66■□□□□ 0.58
SHMT1-203ENST00000354098 PIN1P1O15428 100 aa18.66■□□□□ 0.58
SHMT1-203ENST00000354098 ZNF205O95201 554 aa18.66■□□□□ 0.58
SHMT1-203ENST00000354098 CNN3Q15417 329 aaKnown RBP18.66■□□□□ 0.58
SHMT1-203ENST00000354098 ACSM3Q53FZ2 586 aa18.66■□□□□ 0.58
SHMT1-203ENST00000354098 FAM201AQ5SY85 155 aa18.66■□□□□ 0.58
SHMT1-203ENST00000354098 AVPI1Q5T686 147 aa18.66■□□□□ 0.58
SHMT1-203ENST00000354098 RNF144BQ7Z419 303 aa18.66■□□□□ 0.58
SHMT1-203ENST00000354098 OR51A2Q8NGJ7 313 aa18.66■□□□□ 0.58
SHMT1-203ENST00000354098 DERL3Q96Q80 235 aa18.66■□□□□ 0.58
SHMT1-203ENST00000354098 PIMREGQ9BSJ6 248 aa18.66■□□□□ 0.58
SHMT1-203ENST00000354098 TRBV5-7A0A0A0MS05 114 aa18.65■□□□□ 0.58
SHMT1-203ENST00000354098 C3orf80F5H4A9 247 aa18.65■□□□□ 0.58
SHMT1-203ENST00000354098 AZGP1P25311 298 aaKnown RBP18.65■□□□□ 0.58
SHMT1-203ENST00000354098 HAAOP46952 286 aa18.65■□□□□ 0.58
SHMT1-203ENST00000354098 FUT6P51993 359 aa18.65■□□□□ 0.58
SHMT1-203ENST00000354098 ZNF529Q6P280 563 aa18.65■□□□□ 0.58
SHMT1-203ENST00000354098 WDR82Q6UXN9 313 aa18.65■□□□□ 0.58
SHMT1-203ENST00000354098 ANGPTL5Q86XS5 388 aa18.65■□□□□ 0.58
SHMT1-203ENST00000354098 TECTBQ96PL2 329 aa18.65■□□□□ 0.58
SHMT1-203ENST00000354098 hCG_1807616A0A1W2PRN6 198 aa18.64■□□□□ 0.57
SHMT1-203ENST00000354098 LRP5LA4QPB2 252 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms