RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 IGF2RP11717 2491 aa7.55□□□□□ -1.2
TRIM55-204ENST00000353317 C5orf51A6NDU8 294 aa7.55□□□□□ -1.2
TRIM55-204ENST00000353317 F8VVB4 439 aa7.55□□□□□ -1.2
TRIM55-204ENST00000353317 F8VWA3 439 aa7.55□□□□□ -1.2
TRIM55-204ENST00000353317 H7C2Y5 167 aa7.55□□□□□ -1.2
TRIM55-204ENST00000353317 SSX5O60225 188 aa7.55□□□□□ -1.2
TRIM55-204ENST00000353317 WISP2O76076 250 aa7.55□□□□□ -1.2
TRIM55-204ENST00000353317 PMP2P02689 132 aa7.55□□□□□ -1.2
TRIM55-204ENST00000353317 CELA3AP09093 270 aa7.55□□□□□ -1.2
TRIM55-204ENST00000353317 SERPINF1P36955 418 aa7.55□□□□□ -1.2
TRIM55-204ENST00000353317 GNALP38405 381 aa7.55□□□□□ -1.2
TRIM55-204ENST00000353317 CLN3Q13286 438 aa7.55□□□□□ -1.2
TRIM55-204ENST00000353317 PCK2Q16822 640 aa7.55□□□□□ -1.2
TRIM55-204ENST00000353317 TMEM176BQ3YBM2 270 aaPredicted RBP7.55□□□□□ -1.2
TRIM55-204ENST00000353317 TMEM244Q5VVB8 128 aa7.55□□□□□ -1.2
TRIM55-204ENST00000353317 RNF144BQ7Z419 303 aa7.55□□□□□ -1.2
TRIM55-204ENST00000353317 YRDCQ86U90 279 aaKnown RBP7.55□□□□□ -1.2
TRIM55-204ENST00000353317 CBLN2Q8IUK8 224 aa7.55□□□□□ -1.2
TRIM55-204ENST00000353317 STOML3Q8TAV4 291 aa7.55□□□□□ -1.2
TRIM55-204ENST00000353317 MARCH1Q8TCQ1 289 aa7.55□□□□□ -1.2
TRIM55-204ENST00000353317 DCUN1D4Q92564 292 aa7.55□□□□□ -1.2
TRIM55-204ENST00000353317 RRNAD1Q96FB5 475 aaKnown RBP7.55□□□□□ -1.2
TRIM55-204ENST00000353317 CYYR1Q96J86 154 aa7.55□□□□□ -1.2
TRIM55-204ENST00000353317 SGCZQ96LD1 299 aa7.55□□□□□ -1.2
TRIM55-204ENST00000353317 RNF126Q9BV68 326 aa7.55□□□□□ -1.2
TRIM55-204ENST00000353317 B3GAT1Q9P2W7 334 aa7.55□□□□□ -1.2
TRIM55-204ENST00000353317 MAP1BP46821 2468 aaKnown RBP7.55□□□□□ -1.2
TRIM55-204ENST00000353317 H0YIZ8 118 aa7.55□□□□□ -1.2
TRIM55-204ENST00000353317 AHSA1O95433 338 aa7.55□□□□□ -1.2
TRIM55-204ENST00000353317 F12P00748 615 aaPredicted RBP7.55□□□□□ -1.2
TRIM55-204ENST00000353317 TTRP02766 147 aa7.55□□□□□ -1.2
TRIM55-204ENST00000353317 MMP16P51512 607 aa7.55□□□□□ -1.2
TRIM55-204ENST00000353317 CLDN15P56746 228 aa7.55□□□□□ -1.2
TRIM55-204ENST00000353317 SCRN3Q0VDG4 424 aa7.55□□□□□ -1.2
TRIM55-204ENST00000353317 AIMP2Q13155 320 aaKnown RBP7.55□□□□□ -1.2
TRIM55-204ENST00000353317 RTP5Q14D33 572 aa7.55□□□□□ -1.2
TRIM55-204ENST00000353317 RSPO4Q2I0M5 234 aaPredicted RBP7.55□□□□□ -1.2
TRIM55-204ENST00000353317 PLEKHN1Q494U1 663 aaPredicted RBP7.55□□□□□ -1.2
TRIM55-204ENST00000353317 IGF2-ASQ6U949 168 aa7.55□□□□□ -1.2
TRIM55-204ENST00000353317 PLXDC2Q6UX71 529 aa7.55□□□□□ -1.2
TRIM55-204ENST00000353317 ZSCAN4Q8NAM6 433 aaPredicted RBP7.55□□□□□ -1.2
TRIM55-204ENST00000353317 SLC30A7Q8NEW0 376 aa7.55□□□□□ -1.2
TRIM55-204ENST00000353317 ROBO4Q8WZ75 1007 aa7.55□□□□□ -1.2
TRIM55-204ENST00000353317 MICU1Q9BPX6 476 aa7.55□□□□□ -1.2
TRIM55-204ENST00000353317 NICN1Q9BSH3 213 aa7.55□□□□□ -1.2
TRIM55-204ENST00000353317 TLNRD1Q9H1K6 362 aa7.55□□□□□ -1.2
TRIM55-204ENST00000353317 TMEM100Q9NV29 134 aa7.55□□□□□ -1.2
TRIM55-204ENST00000353317 MED29Q9NX70 200 aa7.55□□□□□ -1.2
TRIM55-204ENST00000353317 NDRG3Q9UGV2 375 aa7.55□□□□□ -1.2
TRIM55-204ENST00000353317 TRBV6-7A0A0A0MS04 114 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 A0A0B4J2A0 478 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 TEX13DA0A0J9YY54 714 aaPredicted RBP7.54□□□□□ -1.2
TRIM55-204ENST00000353317 IFNA6P05013 189 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 H2BFMP0C1H6 154 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 CD79AP11912 226 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 TPT1P13693 172 aaKnown RBP7.54□□□□□ -1.2
TRIM55-204ENST00000353317 HSD11B1P28845 292 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 HAGHLQ6PII5 290 aaPredicted RBP7.54□□□□□ -1.2
TRIM55-204ENST00000353317 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.54□□□□□ -1.2
TRIM55-204ENST00000353317 BAP18Q8IXM2 172 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 BHLHE23Q8NDY6 225 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 OR4A4PQ8NGN8 299 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 MFSD8Q8NHS3 518 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 TMED6Q8WW62 240 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 ASB10Q8WXI3 467 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 TMEM41AQ96HV5 264 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 SPACA5Q96QH8 159 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 OR5B2Q96R09 309 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 EMC6Q9BV81 110 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 ZNF552Q9H707 407 aaPredicted RBP7.54□□□□□ -1.2
TRIM55-204ENST00000353317 CYTL1Q9NRR1 136 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 FAM206AQ9NX38 181 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 ZNF629Q9UEG4 869 aaPredicted RBP7.54□□□□□ -1.2
TRIM55-204ENST00000353317 SHPKQ9UHJ6 478 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 LHX6Q9UPM6 363 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 IGHV3-15A0A0B4J1V0 119 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 MSGN1A6NI15 193 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 F8W036 122 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 OR2T1O43869 369 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 P04436 131 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 CD82P27701 267 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 DSCR4P56555 118 aaPredicted RBP7.54□□□□□ -1.2
TRIM55-204ENST00000353317 BLOC1S1P78537 153 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 OR1C1Q15619 314 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 NKAPLQ5M9Q1 402 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 WIPI1Q5MNZ9 446 aaPredicted RBP7.54□□□□□ -1.2
TRIM55-204ENST00000353317 C10orf91Q5T1B1 145 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 DEGS2Q6QHC5 323 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 HOGA1Q86XE5 327 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 ANGPTL5Q86XS5 388 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 SULF2Q8IWU5 870 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 SLC22A24Q8N4F4 322 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 ZNF248Q8NDW4 579 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 OR1M1Q8NGA1 313 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 OR13C9Q8NGT0 318 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 OR10R2Q8NGX6 335 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 OR4K15Q8NH41 348 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 RNF133Q8WVZ7 376 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 KCNK17Q96T54 332 aa7.54□□□□□ -1.2
TRIM55-204ENST00000353317 NMES1Q9C002 83 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms