RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 TMEM255AQ5JRV8 349 aa12.42□□□□□ -0.42
NIPAL3-202ENST00000339255 C1orf100Q5SVJ3 147 aa12.42□□□□□ -0.42
NIPAL3-202ENST00000339255 LYPD6Q86Y78 171 aa12.42□□□□□ -0.42
NIPAL3-202ENST00000339255 OR8S1Q8NH09 359 aa12.42□□□□□ -0.42
NIPAL3-202ENST00000339255 NPRL2Q8WTW4 380 aa12.42□□□□□ -0.42
NIPAL3-202ENST00000339255 OR5P3Q8WZ94 311 aa12.42□□□□□ -0.42
NIPAL3-202ENST00000339255 MICU1Q9BPX6 476 aa12.42□□□□□ -0.42
NIPAL3-202ENST00000339255 SYT3Q9BQG1 590 aa12.42□□□□□ -0.42
NIPAL3-202ENST00000339255 RTL8AQ9BWD3 113 aa12.42□□□□□ -0.42
NIPAL3-202ENST00000339255 MRPL37Q9BZE1 423 aaKnown RBP12.42□□□□□ -0.42
NIPAL3-202ENST00000339255 NKIRAS2Q9NYR9 191 aa12.42□□□□□ -0.42
NIPAL3-202ENST00000339255 STEAP1Q9UHE8 339 aa12.42□□□□□ -0.42
NIPAL3-202ENST00000339255 ARFGEF3Q5TH69 2177 aa12.41□□□□□ -0.42
NIPAL3-202ENST00000339255 PQLC2LA1A4F0 135 aa12.41□□□□□ -0.42
NIPAL3-202ENST00000339255 HTR2CP28335 458 aa12.41□□□□□ -0.42
NIPAL3-202ENST00000339255 APOBEC3AP31941 199 aaPredicted RBP12.41□□□□□ -0.42
NIPAL3-202ENST00000339255 MMP15P51511 669 aa12.41□□□□□ -0.42
NIPAL3-202ENST00000339255 ATP1B3P54709 279 aa12.41□□□□□ -0.42
NIPAL3-202ENST00000339255 GNG3P63215 75 aa12.41□□□□□ -0.42
NIPAL3-202ENST00000339255 OR8G1Q15617 311 aa12.41□□□□□ -0.42
NIPAL3-202ENST00000339255 EFNB3Q15768 340 aa12.41□□□□□ -0.42
NIPAL3-202ENST00000339255 RAB11BQ15907 218 aa12.41□□□□□ -0.42
NIPAL3-202ENST00000339255 ALKBH6Q3KRA9 238 aa12.41□□□□□ -0.42
NIPAL3-202ENST00000339255 IDNKQ5T6J7 187 aa12.41□□□□□ -0.42
NIPAL3-202ENST00000339255 MZT2AQ6P582 158 aa12.41□□□□□ -0.42
NIPAL3-202ENST00000339255 LINC00299Q6ZSB3 139 aa12.41□□□□□ -0.42
NIPAL3-202ENST00000339255 HPSE2Q8WWQ2 592 aa12.41□□□□□ -0.42
NIPAL3-202ENST00000339255 HS3ST6Q96QI5 342 aa12.41□□□□□ -0.42
NIPAL3-202ENST00000339255 GPER1Q99527 375 aa12.41□□□□□ -0.42
NIPAL3-202ENST00000339255 DHRS9Q9BPW9 319 aa12.41□□□□□ -0.42
NIPAL3-202ENST00000339255 C14orf119Q9NWQ9 140 aa12.41□□□□□ -0.42
NIPAL3-202ENST00000339255 ABRACLQ9P1F3 81 aa12.41□□□□□ -0.42
NIPAL3-202ENST00000339255 FBXO9Q9UK97 447 aaPredicted RBP12.41□□□□□ -0.42
NIPAL3-202ENST00000339255 FAM230AA0A1W2PPH8 454 aa12.4□□□□□ -0.42
NIPAL3-202ENST00000339255 A6NNC1 897 aa12.4□□□□□ -0.42
NIPAL3-202ENST00000339255 E7EQL1 145 aa12.4□□□□□ -0.42
NIPAL3-202ENST00000339255 CALCBP10092 127 aa12.4□□□□□ -0.42
NIPAL3-202ENST00000339255 NKPD1Q17RQ9 610 aa12.4□□□□□ -0.42
NIPAL3-202ENST00000339255 FAM166AQ6J272 317 aa12.4□□□□□ -0.42
NIPAL3-202ENST00000339255 TRMT10AQ8TBZ6 339 aaKnown RBP12.4□□□□□ -0.42
NIPAL3-202ENST00000339255 DIRC2Q96SL1 478 aa12.4□□□□□ -0.42
NIPAL3-202ENST00000339255 LIN7BQ9HAP6 207 aa12.4□□□□□ -0.42
NIPAL3-202ENST00000339255 FAIMQ9NVQ4 179 aa12.4□□□□□ -0.42
NIPAL3-202ENST00000339255 CISD1Q9NZ45 108 aaKnown RBP12.4□□□□□ -0.42
NIPAL3-202ENST00000339255 TAAR3PQ9P1P4 343 aa12.4□□□□□ -0.42
NIPAL3-202ENST00000339255 ZDHHC8Q9ULC8 765 aa12.4□□□□□ -0.42
NIPAL3-202ENST00000339255 ETV7Q9Y603 341 aa12.4□□□□□ -0.42
NIPAL3-202ENST00000339255 PMF1-BGLAPU3KQ54 211 aa12.4□□□□□ -0.42
NIPAL3-202ENST00000339255 TMEM210A6NLX4 147 aa12.39□□□□□ -0.43
NIPAL3-202ENST00000339255 M0R233 179 aa12.39□□□□□ -0.43
NIPAL3-202ENST00000339255 UBBP0CG47 229 aa12.39□□□□□ -0.43
NIPAL3-202ENST00000339255 THBS2P35442 1172 aa12.39□□□□□ -0.43
NIPAL3-202ENST00000339255 ALDH3B1P43353 468 aa12.39□□□□□ -0.43
NIPAL3-202ENST00000339255 GPM6AP51674 278 aa12.39□□□□□ -0.43
NIPAL3-202ENST00000339255 HES5Q5TA89 166 aa12.39□□□□□ -0.43
NIPAL3-202ENST00000339255 LRP11Q86VZ4 500 aa12.39□□□□□ -0.43
NIPAL3-202ENST00000339255 ZNF671Q8TAW3 534 aa12.39□□□□□ -0.43
NIPAL3-202ENST00000339255 FBXW5Q969U6 566 aa12.39□□□□□ -0.43
NIPAL3-202ENST00000339255 RNF170Q96K19 258 aa12.39□□□□□ -0.43
NIPAL3-202ENST00000339255 C6orf62Q9GZU0 229 aaPredicted RBP12.39□□□□□ -0.43
NIPAL3-202ENST00000339255 CNTD2Q9H8S5 307 aa12.39□□□□□ -0.43
NIPAL3-202ENST00000339255 GHRLQ9UBU3 117 aa12.39□□□□□ -0.43
NIPAL3-202ENST00000339255 CACNA1DQ01668 2161 aa12.39□□□□□ -0.43
NIPAL3-202ENST00000339255 B9A039 149 aa12.38□□□□□ -0.43
NIPAL3-202ENST00000339255 BPNT1O95861 308 aa12.38□□□□□ -0.43
NIPAL3-202ENST00000339255 PLAUP00749 431 aa12.38□□□□□ -0.43
NIPAL3-202ENST00000339255 SLC2A2P11168 524 aaPredicted RBP12.38□□□□□ -0.43
NIPAL3-202ENST00000339255 PTGFRP43088 359 aa12.38□□□□□ -0.43
NIPAL3-202ENST00000339255 FAM76BQ5HYJ3 339 aa12.38□□□□□ -0.43
NIPAL3-202ENST00000339255 AWAT2Q6E213 333 aa12.38□□□□□ -0.43
NIPAL3-202ENST00000339255 ZNF573Q86YE8 665 aa12.38□□□□□ -0.43
NIPAL3-202ENST00000339255 CELF2-AS1Q8N7Q2 184 aa12.38□□□□□ -0.43
NIPAL3-202ENST00000339255 SPACA5Q96QH8 159 aa12.38□□□□□ -0.43
NIPAL3-202ENST00000339255 CXXC4Q9H2H0 198 aa12.38□□□□□ -0.43
NIPAL3-202ENST00000339255 PPP1R3EQ9H7J1 279 aa12.38□□□□□ -0.43
NIPAL3-202ENST00000339255 SMURF1Q9HCE7 757 aa12.38□□□□□ -0.43
NIPAL3-202ENST00000339255 MSL2Q9HCI7 577 aa12.38□□□□□ -0.43
NIPAL3-202ENST00000339255 MYEF2Q9P2K5 600 aaKnown RBP12.38□□□□□ -0.43
NIPAL3-202ENST00000339255 MRPS28Q9Y2Q9 187 aaKnown RBP12.38□□□□□ -0.43
NIPAL3-202ENST00000339255 PEX16Q9Y5Y5 336 aa12.38□□□□□ -0.43
NIPAL3-202ENST00000339255 RAI1Q7Z5J4 1906 aaPredicted RBP12.38□□□□□ -0.43
NIPAL3-202ENST00000339255 LOC100289279A0A1B0GTE1 492 aa12.38□□□□□ -0.43
NIPAL3-202ENST00000339255 LRP5LA4QPB2 252 aa12.38□□□□□ -0.43
NIPAL3-202ENST00000339255 ZSCAN5BA6NJL1 495 aa12.38□□□□□ -0.43
NIPAL3-202ENST00000339255 ZNF732B4DXR9 585 aa12.38□□□□□ -0.43
NIPAL3-202ENST00000339255 HS3ST1O14792 307 aa12.38□□□□□ -0.43
NIPAL3-202ENST00000339255 MLNRO43193 412 aa12.38□□□□□ -0.43
NIPAL3-202ENST00000339255 ADH4P08319 380 aa12.38□□□□□ -0.43
NIPAL3-202ENST00000339255 ARSBP15848 533 aa12.38□□□□□ -0.43
NIPAL3-202ENST00000339255 TNFSF4P23510 183 aa12.38□□□□□ -0.43
NIPAL3-202ENST00000339255 S100A5P33763 92 aa12.38□□□□□ -0.43
NIPAL3-202ENST00000339255 ZNF81P51508 661 aa12.38□□□□□ -0.43
NIPAL3-202ENST00000339255 DMRTC1Q5HYR2 192 aa12.38□□□□□ -0.43
NIPAL3-202ENST00000339255 Q6ZR03 302 aa12.38□□□□□ -0.43
NIPAL3-202ENST00000339255 SAXO1Q8IYX7 474 aa12.38□□□□□ -0.43
NIPAL3-202ENST00000339255 FBXL14Q8N1E6 418 aa12.38□□□□□ -0.43
NIPAL3-202ENST00000339255 MUC15Q8N387 334 aa12.38□□□□□ -0.43
NIPAL3-202ENST00000339255 ZSCAN4Q8NAM6 433 aaPredicted RBP12.38□□□□□ -0.43
NIPAL3-202ENST00000339255 OR10AD1Q8NGE0 317 aa12.38□□□□□ -0.43
NIPAL3-202ENST00000339255 OR4D6Q8NGJ1 314 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms