RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 IRF2P14316 349 aa12.99□□□□□ -0.33
SEC13-201ENST00000337354 PRKACBP22694 351 aa12.99□□□□□ -0.33
SEC13-201ENST00000337354 MAPK3P27361 379 aaPredicted RBP12.99□□□□□ -0.33
SEC13-201ENST00000337354 RIN1Q13671 783 aa12.99□□□□□ -0.33
SEC13-201ENST00000337354 UBE2V2Q15819 145 aa12.99□□□□□ -0.33
SEC13-201ENST00000337354 SPRNQ5BIV9 151 aa12.99□□□□□ -0.33
SEC13-201ENST00000337354 ARMCX4Q5H9R4 360 aa12.99□□□□□ -0.33
SEC13-201ENST00000337354 CEP78Q5JTW2 689 aa12.99□□□□□ -0.33
SEC13-201ENST00000337354 LIPKQ5VXJ0 399 aa12.99□□□□□ -0.33
SEC13-201ENST00000337354 SPNS3Q6ZMD2 512 aa12.99□□□□□ -0.33
SEC13-201ENST00000337354 KCTD8Q6ZWB6 473 aa12.99□□□□□ -0.33
SEC13-201ENST00000337354 PEG10Q86TG7 708 aaKnown RBP12.99□□□□□ -0.33
SEC13-201ENST00000337354 KRTAP1-3Q8IUG1 177 aa12.99□□□□□ -0.33
SEC13-201ENST00000337354 C1orf87Q8N0U7 546 aa12.99□□□□□ -0.33
SEC13-201ENST00000337354 DNAAF1Q8NEP3 725 aa12.99□□□□□ -0.33
SEC13-201ENST00000337354 OR1M1Q8NGA1 313 aa12.99□□□□□ -0.33
SEC13-201ENST00000337354 OR11L1Q8NGX0 322 aa12.99□□□□□ -0.33
SEC13-201ENST00000337354 C10orf105Q8TEF2 133 aa12.99□□□□□ -0.33
SEC13-201ENST00000337354 HPSE2Q8WWQ2 592 aa12.99□□□□□ -0.33
SEC13-201ENST00000337354 DVL3Q92997 716 aaPredicted RBP12.99□□□□□ -0.33
SEC13-201ENST00000337354 YIPF5Q969M3 257 aa12.99□□□□□ -0.33
SEC13-201ENST00000337354 TMEM106AQ96A25 262 aa12.99□□□□□ -0.33
SEC13-201ENST00000337354 SPSB1Q96BD6 273 aa12.99□□□□□ -0.33
SEC13-201ENST00000337354 OPALINQ96PE5 141 aa12.99□□□□□ -0.33
SEC13-201ENST00000337354 TLNRD1Q9H1K6 362 aa12.99□□□□□ -0.33
SEC13-201ENST00000337354 GPR173Q9NS66 373 aa12.99□□□□□ -0.33
SEC13-201ENST00000337354 TMEM106BQ9NUM4 274 aa12.99□□□□□ -0.33
SEC13-201ENST00000337354 LRP5LA4QPB2 252 aa12.98□□□□□ -0.33
SEC13-201ENST00000337354 ZNF879B4DU55 563 aa12.98□□□□□ -0.33
SEC13-201ENST00000337354 ZNF732B4DXR9 585 aa12.98□□□□□ -0.33
SEC13-201ENST00000337354 LYNX1G3V0Z9 82 aa12.98□□□□□ -0.33
SEC13-201ENST00000337354 OCMP0CE72 109 aaPredicted RBP12.98□□□□□ -0.33
SEC13-201ENST00000337354 LYNX1P0DP58 116 aa12.98□□□□□ -0.33
SEC13-201ENST00000337354 SLC25A16P16260 332 aa12.98□□□□□ -0.33
SEC13-201ENST00000337354 ATF1P18846 271 aa12.98□□□□□ -0.33
SEC13-201ENST00000337354 THBS2P35442 1172 aa12.98□□□□□ -0.33
SEC13-201ENST00000337354 CFHR2P36980 270 aa12.98□□□□□ -0.33
SEC13-201ENST00000337354 SOX2P48431 317 aa12.98□□□□□ -0.33
SEC13-201ENST00000337354 GPM6AP51674 278 aa12.98□□□□□ -0.33
SEC13-201ENST00000337354 ZNF154Q13106 437 aa12.98□□□□□ -0.33
SEC13-201ENST00000337354 MPPED2Q15777 294 aa12.98□□□□□ -0.33
SEC13-201ENST00000337354 CARTPTQ16568 116 aa12.98□□□□□ -0.33
SEC13-201ENST00000337354 MOGAT3Q86VF5 341 aa12.98□□□□□ -0.33
SEC13-201ENST00000337354 ZNF573Q86YE8 665 aa12.98□□□□□ -0.33
SEC13-201ENST00000337354 PHC2Q8IXK0 858 aa12.98□□□□□ -0.33
SEC13-201ENST00000337354 RAB1CQ92928 201 aa12.98□□□□□ -0.33
SEC13-201ENST00000337354 PIMREGQ9BSJ6 248 aa12.98□□□□□ -0.33
SEC13-201ENST00000337354 VCX3AQ9NNX9 186 aa12.98□□□□□ -0.33
SEC13-201ENST00000337354 ARID1AO14497 2285 aa12.98□□□□□ -0.33
SEC13-201ENST00000337354 F8P00451 2351 aa12.98□□□□□ -0.33
SEC13-201ENST00000337354 PQLC2LA1A4F0 135 aa12.97□□□□□ -0.33
SEC13-201ENST00000337354 CLDN25C9JDP6 229 aa12.97□□□□□ -0.33
SEC13-201ENST00000337354 GPX5O75715 221 aa12.97□□□□□ -0.33
SEC13-201ENST00000337354 FSTL3O95633 263 aa12.97□□□□□ -0.33
SEC13-201ENST00000337354 ACSM3Q53FZ2 586 aa12.97□□□□□ -0.33
SEC13-201ENST00000337354 SYT6Q5T7P8 510 aaPredicted RBP12.97□□□□□ -0.33
SEC13-201ENST00000337354 PRAMEF6Q5VXH4 476 aa12.97□□□□□ -0.33
SEC13-201ENST00000337354 UNQ9370/PRO34162Q6UXP9 181 aa12.97□□□□□ -0.33
SEC13-201ENST00000337354 WDR86Q86TI4 376 aa12.97□□□□□ -0.33
SEC13-201ENST00000337354 PHYHIPQ92561 330 aa12.97□□□□□ -0.33
SEC13-201ENST00000337354 BORCS8Q96FH0 119 aa12.97□□□□□ -0.33
SEC13-201ENST00000337354 TIMD4Q96H15 378 aa12.97□□□□□ -0.33
SEC13-201ENST00000337354 OR51I2Q9H344 312 aa12.97□□□□□ -0.33
SEC13-201ENST00000337354 UFSP2Q9NUQ7 469 aa12.97□□□□□ -0.33
SEC13-201ENST00000337354 C1orf123Q9NWV4 160 aa12.97□□□□□ -0.33
SEC13-201ENST00000337354 RNF7Q9UBF6 113 aa12.97□□□□□ -0.33
SEC13-201ENST00000337354 CKLFQ9UBR5 152 aa12.97□□□□□ -0.33
SEC13-201ENST00000337354 CACNG2Q9Y698 323 aa12.97□□□□□ -0.33
SEC13-201ENST00000337354 MED13LQ71F56 2210 aa12.97□□□□□ -0.33
SEC13-201ENST00000337354 CELSR1Q9NYQ6 3014 aa12.96□□□□□ -0.33
SEC13-201ENST00000337354 IGKV1-9A0A0C4DH69 117 aa12.96□□□□□ -0.33
SEC13-201ENST00000337354 IGHV3-64DA0A0J9YX35 117 aa12.96□□□□□ -0.33
SEC13-201ENST00000337354 A6NLC8 198 aa12.96□□□□□ -0.33
SEC13-201ENST00000337354 VWC2LB2RUY7 222 aa12.96□□□□□ -0.33
SEC13-201ENST00000337354 TMEM178BH3BS89 294 aa12.96□□□□□ -0.33
SEC13-201ENST00000337354 CCRL2O00421 344 aa12.96□□□□□ -0.33
SEC13-201ENST00000337354 CDIPTO14735 213 aa12.96□□□□□ -0.33
SEC13-201ENST00000337354 MAGEB3O15480 346 aa12.96□□□□□ -0.33
SEC13-201ENST00000337354 SULT1B1O43704 296 aa12.96□□□□□ -0.33
SEC13-201ENST00000337354 RAB3AP20336 220 aa12.96□□□□□ -0.33
SEC13-201ENST00000337354 GABRA5P31644 462 aa12.96□□□□□ -0.33
SEC13-201ENST00000337354 PMELP40967 661 aa12.96□□□□□ -0.33
SEC13-201ENST00000337354 NR4A2P43354 598 aa12.96□□□□□ -0.33
SEC13-201ENST00000337354 GPR6P46095 362 aaPredicted RBP12.96□□□□□ -0.33
SEC13-201ENST00000337354 RBP2P50120 134 aa12.96□□□□□ -0.33
SEC13-201ENST00000337354 ATP1B3P54709 279 aa12.96□□□□□ -0.33
SEC13-201ENST00000337354 ZNF529Q6P280 563 aa12.96□□□□□ -0.33
SEC13-201ENST00000337354 LHFPL2Q6ZUX7 228 aa12.96□□□□□ -0.33
SEC13-201ENST00000337354 C11orf53Q8IXP5 236 aa12.96□□□□□ -0.33
SEC13-201ENST00000337354 WFDC11Q8NEX6 87 aa12.96□□□□□ -0.33
SEC13-201ENST00000337354 OR13C5Q8NGS8 318 aa12.96□□□□□ -0.33
SEC13-201ENST00000337354 OR13C9Q8NGT0 318 aa12.96□□□□□ -0.33
SEC13-201ENST00000337354 ZNF420Q8TAQ5 688 aaPredicted RBP12.96□□□□□ -0.33
SEC13-201ENST00000337354 ZNF671Q8TAW3 534 aa12.96□□□□□ -0.33
SEC13-201ENST00000337354 Q96MF0 132 aa12.96□□□□□ -0.33
SEC13-201ENST00000337354 TMED9Q9BVK6 235 aa12.96□□□□□ -0.33
SEC13-201ENST00000337354 FGF23Q9GZV9 251 aaPredicted RBP12.96□□□□□ -0.33
SEC13-201ENST00000337354 TREM2Q9NZC2 230 aa12.96□□□□□ -0.33
SEC13-201ENST00000337354 SF3B6Q9Y3B4 125 aaKnown RBP12.96□□□□□ -0.33
SEC13-201ENST00000337354 USF3Q68DE3 2245 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms