RNA–Protein interactions for RNA: ENST00000325307.11

HMGB3-201, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 3,560 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-201ENST00000325307 EIF4EP06730 217 aaKnown RBP8.67□□□□□ -1.02
HMGB3-201ENST00000325307 CECR9P0C854 216 aa8.67□□□□□ -1.02
HMGB3-201ENST00000325307 BAMBIQ13145 260 aa8.67□□□□□ -1.02
HMGB3-201ENST00000325307 RIN1Q13671 783 aa8.67□□□□□ -1.02
HMGB3-201ENST00000325307 MTFR2Q6P444 385 aa8.67□□□□□ -1.02
HMGB3-201ENST00000325307 SFXN4Q6P4A7 337 aa8.67□□□□□ -1.02
HMGB3-201ENST00000325307 ZNF101Q8IZC7 436 aa8.67□□□□□ -1.02
HMGB3-201ENST00000325307 AKAP1Q92667 903 aaKnown RBP eCLIP8.67□□□□□ -1.02
HMGB3-201ENST00000325307 LYZL4Q96KX0 146 aa8.67□□□□□ -1.02
HMGB3-201ENST00000325307 ZNF75AQ96N20 296 aa8.67□□□□□ -1.02
HMGB3-201ENST00000325307 ZNF275Q9NSD4 429 aaPredicted RBP8.67□□□□□ -1.02
HMGB3-201ENST00000325307 TAS2R4Q9NYW5 299 aa8.67□□□□□ -1.02
HMGB3-201ENST00000325307 PTTG3PQ9NZH4 202 aa8.67□□□□□ -1.02
HMGB3-201ENST00000325307 AK6Q9Y3D8 172 aaKnown RBP8.67□□□□□ -1.02
HMGB3-201ENST00000325307 POM121CA8CG34 1229 aa8.67□□□□□ -1.02
HMGB3-201ENST00000325307 XRCC2O43543 280 aa8.67□□□□□ -1.02
HMGB3-201ENST00000325307 IGKV3-15P01624 115 aa8.67□□□□□ -1.02
HMGB3-201ENST00000325307 RAB3BP20337 219 aa8.67□□□□□ -1.02
HMGB3-201ENST00000325307 CCKARP32238 428 aa8.67□□□□□ -1.02
HMGB3-201ENST00000325307 GZMKP49863 264 aa8.67□□□□□ -1.02
HMGB3-201ENST00000325307 SPATA46Q5T0L3 261 aa8.67□□□□□ -1.02
HMGB3-201ENST00000325307 MRPL21Q7Z2W9 205 aaKnown RBP8.67□□□□□ -1.02
HMGB3-201ENST00000325307 WFDC8Q8IUA0 241 aa8.67□□□□□ -1.02
HMGB3-201ENST00000325307 LRRC46Q96FV0 321 aa8.67□□□□□ -1.02
HMGB3-201ENST00000325307 STARD10Q9Y365 291 aa8.67□□□□□ -1.02
HMGB3-201ENST00000325307 TRAV8-7A0A075B6U6 113 aa8.67□□□□□ -1.02
HMGB3-201ENST00000325307 TRBV5-7A0A0A0MS05 114 aa8.67□□□□□ -1.02
HMGB3-201ENST00000325307 TRAV1-2A0A0B4J238 106 aa8.67□□□□□ -1.02
HMGB3-201ENST00000325307 ANXA2P2A6NMY6 339 aa8.67□□□□□ -1.02
HMGB3-201ENST00000325307 DHRS3O75911 302 aa8.67□□□□□ -1.02
HMGB3-201ENST00000325307 SLC2A2P11168 524 aaPredicted RBP8.67□□□□□ -1.02
HMGB3-201ENST00000325307 WNT5AP41221 380 aa8.67□□□□□ -1.02
HMGB3-201ENST00000325307 ZNF92Q03936 586 aa8.67□□□□□ -1.02
HMGB3-201ENST00000325307 ASAH1Q13510 395 aa8.67□□□□□ -1.02
HMGB3-201ENST00000325307 IDNKQ5T6J7 187 aa8.67□□□□□ -1.02
HMGB3-201ENST00000325307 TPRA1Q86W33 373 aa8.67□□□□□ -1.02
HMGB3-201ENST00000325307 OR5L1Q8NGL2 311 aa8.67□□□□□ -1.02
HMGB3-201ENST00000325307 SNAPC3Q92966 411 aa8.67□□□□□ -1.02
HMGB3-201ENST00000325307 ADAT3Q96EY9 351 aaPredicted RBP8.67□□□□□ -1.02
HMGB3-201ENST00000325307 C11orf54Q9H0W9 315 aaPredicted RBP8.67□□□□□ -1.02
HMGB3-201ENST00000325307 RGCCQ9H4X1 137 aa8.67□□□□□ -1.02
HMGB3-201ENST00000325307 KCNJ16Q9NPI9 418 aa8.67□□□□□ -1.02
HMGB3-201ENST00000325307 PIGLQ9Y2B2 252 aa8.67□□□□□ -1.02
HMGB3-201ENST00000325307 PDCD5O14737 125 aa8.66□□□□□ -1.02
HMGB3-201ENST00000325307 C1QBP02746 253 aa8.66□□□□□ -1.02
HMGB3-201ENST00000325307 FAHP16930 419 aa8.66□□□□□ -1.02
HMGB3-201ENST00000325307 HLXQ14774 488 aaPredicted RBP8.66□□□□□ -1.02
HMGB3-201ENST00000325307 C4orf17Q53FE4 359 aa8.66□□□□□ -1.02
HMGB3-201ENST00000325307 SERPINA12Q8IW75 414 aa8.66□□□□□ -1.02
HMGB3-201ENST00000325307 GDPD1Q8N9F7 314 aa8.66□□□□□ -1.02
HMGB3-201ENST00000325307 IGHV1-18A0A0C4DH31 117 aa8.66□□□□□ -1.02
HMGB3-201ENST00000325307 LINC00587B1AMM8 73 aa8.66□□□□□ -1.02
HMGB3-201ENST00000325307 SPOCK1Q08629 439 aa8.66□□□□□ -1.02
HMGB3-201ENST00000325307 PGAP1Q75T13 922 aa8.66□□□□□ -1.02
HMGB3-201ENST00000325307 SEMA6DQ8NFY4 1073 aa8.66□□□□□ -1.02
HMGB3-201ENST00000325307 OR5D14Q8NGL3 314 aa8.66□□□□□ -1.02
HMGB3-201ENST00000325307 OR13C9Q8NGT0 318 aa8.66□□□□□ -1.02
HMGB3-201ENST00000325307 ZCCHC4Q9H5U6 513 aa8.66□□□□□ -1.02
HMGB3-201ENST00000325307 RANGRFQ9HD47 186 aaPredicted RBP8.66□□□□□ -1.02
HMGB3-201ENST00000325307 ZNF391Q9UJN7 358 aa8.66□□□□□ -1.02
HMGB3-201ENST00000325307 GGT3PA6NGU5 568 aa8.66□□□□□ -1.02
HMGB3-201ENST00000325307 DBX1A6NMT0 343 aa8.66□□□□□ -1.02
HMGB3-201ENST00000325307 CCL1P22362 96 aa8.66□□□□□ -1.02
HMGB3-201ENST00000325307 MAP2K3P46734 347 aa8.66□□□□□ -1.02
HMGB3-201ENST00000325307 SNTB1Q13884 538 aaKnown RBP8.66□□□□□ -1.02
HMGB3-201ENST00000325307 COLCA1Q6ZS62 124 aa8.66□□□□□ -1.02
HMGB3-201ENST00000325307 GLCCI1Q86VQ1 547 aa8.66□□□□□ -1.02
HMGB3-201ENST00000325307 DNAAF1Q8NEP3 725 aa8.66□□□□□ -1.02
HMGB3-201ENST00000325307 OR14K1Q8NGZ2 314 aa8.66□□□□□ -1.02
HMGB3-201ENST00000325307 SMG1Q96Q15 3661 aaKnown RBP8.66□□□□□ -1.02
HMGB3-201ENST00000325307 LANCL1O43813 399 aa8.65□□□□□ -1.02
HMGB3-201ENST00000325307 ZG16O60844 167 aa8.65□□□□□ -1.02
HMGB3-201ENST00000325307 ATF1P18846 271 aa8.65□□□□□ -1.02
HMGB3-201ENST00000325307 GSK3AP49840 483 aa8.65□□□□□ -1.02
HMGB3-201ENST00000325307 RIPPLY1Q0D2K3 151 aa8.65□□□□□ -1.02
HMGB3-201ENST00000325307 MAJINQ3KP22 176 aa8.65□□□□□ -1.02
HMGB3-201ENST00000325307 PYDC2Q56P42 97 aa8.65□□□□□ -1.02
HMGB3-201ENST00000325307 DMRTC1Q5HYR2 192 aa8.65□□□□□ -1.02
HMGB3-201ENST00000325307 UNQ6126/PRO20091Q6UXV3 157 aa8.65□□□□□ -1.02
HMGB3-201ENST00000325307 OR1J1Q8NGS3 322 aa8.65□□□□□ -1.02
HMGB3-201ENST00000325307 RADILQ96JH8 1075 aa8.65□□□□□ -1.02
HMGB3-201ENST00000325307 FYTTD1Q96QD9 318 aaKnown RBP8.65□□□□□ -1.02
HMGB3-201ENST00000325307 CFAP46Q8IYW2 2715 aa8.65□□□□□ -1.02
HMGB3-201ENST00000325307 IGLV1-44P01699 117 aa8.65□□□□□ -1.02
HMGB3-201ENST00000325307 CRYAAP02489 173 aa8.65□□□□□ -1.02
HMGB3-201ENST00000325307 EPXP11678 715 aa8.65□□□□□ -1.02
HMGB3-201ENST00000325307 UCP2P55851 309 aa8.65□□□□□ -1.02
HMGB3-201ENST00000325307 PPP1CBP62140 327 aa8.65□□□□□ -1.02
HMGB3-201ENST00000325307 GK2Q14410 553 aaPredicted RBP8.65□□□□□ -1.02
HMGB3-201ENST00000325307 C22orf34Q6ZV56 151 aa8.65□□□□□ -1.02
HMGB3-201ENST00000325307 ZNF843Q8N446 348 aa8.65□□□□□ -1.02
HMGB3-201ENST00000325307 PLPP7Q8NBV4 271 aa8.65□□□□□ -1.02
HMGB3-201ENST00000325307 MMP28Q9H239 520 aa8.65□□□□□ -1.02
HMGB3-201ENST00000325307 CYSLTR2Q9NS75 346 aa8.65□□□□□ -1.02
HMGB3-201ENST00000325307 ZNF69Q9UC07 566 aa8.65□□□□□ -1.02
HMGB3-201ENST00000325307 HIVEP3Q5T1R4 2406 aa8.65□□□□□ -1.03
HMGB3-201ENST00000325307 TRAV20A0A0B4J274 112 aa8.65□□□□□ -1.03
HMGB3-201ENST00000325307 IGHV2OR16-5A0A0B4J2B6 119 aa8.65□□□□□ -1.03
HMGB3-201ENST00000325307 SMPD2O60906 423 aa8.65□□□□□ -1.03
HMGB3-201ENST00000325307 BPNT1O95861 308 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms