RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 TIMP3P35625 211 aa10.43□□□□□ -0.74
SDE2-201ENST00000272091 MTCP1P56278 107 aa10.43□□□□□ -0.74
SDE2-201ENST00000272091 RAB25P57735 213 aa10.43□□□□□ -0.74
SDE2-201ENST00000272091 TGFBR3Q03167 851 aa10.43□□□□□ -0.74
SDE2-201ENST00000272091 PCGF3Q3KNV8 242 aa10.43□□□□□ -0.74
SDE2-201ENST00000272091 SFRP4Q6FHJ7 346 aaPredicted RBP10.43□□□□□ -0.74
SDE2-201ENST00000272091 Q6ZTK2 550 aa10.43□□□□□ -0.74
SDE2-201ENST00000272091 HPS1Q92902 700 aa10.43□□□□□ -0.74
SDE2-201ENST00000272091 PHF21AQ96BD5 680 aa10.43□□□□□ -0.74
SDE2-201ENST00000272091 TMEM59Q9BXS4 323 aa10.43□□□□□ -0.74
SDE2-201ENST00000272091 ZNF581Q9P0T4 197 aa10.43□□□□□ -0.74
SDE2-201ENST00000272091 KCNN3Q9UGI6 736 aa10.43□□□□□ -0.74
SDE2-201ENST00000272091 SPTBN4Q9H254 2564 aa10.43□□□□□ -0.74
SDE2-201ENST00000272091 METTL21EPA6NDL7 271 aa10.43□□□□□ -0.74
SDE2-201ENST00000272091 ANGPTL7O43827 346 aa10.43□□□□□ -0.74
SDE2-201ENST00000272091 IGKV3-15P01624 115 aa10.43□□□□□ -0.74
SDE2-201ENST00000272091 LPLP06858 475 aa10.43□□□□□ -0.74
SDE2-201ENST00000272091 IDH3GP51553 393 aaPredicted RBP10.43□□□□□ -0.74
SDE2-201ENST00000272091 CDNFQ49AH0 187 aa10.43□□□□□ -0.74
SDE2-201ENST00000272091 CACNG6Q9BXT2 260 aa10.43□□□□□ -0.74
SDE2-201ENST00000272091 DPAGT1Q9H3H5 408 aa10.43□□□□□ -0.74
SDE2-201ENST00000272091 NUDT15Q9NV35 164 aa10.43□□□□□ -0.74
SDE2-201ENST00000272091 NPAP1Q9NZP6 1156 aa10.43□□□□□ -0.74
SDE2-201ENST00000272091 SULT1C2O00338 296 aa10.42□□□□□ -0.74
SDE2-201ENST00000272091 SMPD2O60906 423 aa10.42□□□□□ -0.74
SDE2-201ENST00000272091 RBBP9O75884 186 aa10.42□□□□□ -0.74
SDE2-201ENST00000272091 HNRNPCP07910 306 aaKnown RBP eCLIP10.42□□□□□ -0.74
SDE2-201ENST00000272091 SERPINA2P20848 420 aa10.42□□□□□ -0.74
SDE2-201ENST00000272091 ERVS71-1P61550 626 aa10.42□□□□□ -0.74
SDE2-201ENST00000272091 PLCXD3Q63HM9 321 aa10.42□□□□□ -0.74
SDE2-201ENST00000272091 LHFPL2Q6ZUX7 228 aa10.42□□□□□ -0.74
SDE2-201ENST00000272091 CCDC36Q8IYA8 594 aa10.42□□□□□ -0.74
SDE2-201ENST00000272091 PNLDC1Q8NA58 520 aaKnown RBP10.42□□□□□ -0.74
SDE2-201ENST00000272091 OR4C16Q8NGL9 310 aa10.42□□□□□ -0.74
SDE2-201ENST00000272091 DVL3Q92997 716 aaPredicted RBP10.42□□□□□ -0.74
SDE2-201ENST00000272091 SNRNP40Q96DI7 357 aaKnown RBP10.42□□□□□ -0.74
SDE2-201ENST00000272091 TM2D1Q9BX74 207 aa10.42□□□□□ -0.74
SDE2-201ENST00000272091 SVILO95425 2214 aa10.42□□□□□ -0.74
SDE2-201ENST00000272091 TRAV6A0A075B6T7 132 aa10.42□□□□□ -0.74
SDE2-201ENST00000272091 INMT-MINDY4F8WBC2 141 aa10.42□□□□□ -0.74
SDE2-201ENST00000272091 GLI4P10075 376 aa10.42□□□□□ -0.74
SDE2-201ENST00000272091 MGMTP16455 207 aa10.42□□□□□ -0.74
SDE2-201ENST00000272091 PRKACBP22694 351 aa10.42□□□□□ -0.74
SDE2-201ENST00000272091 PTGER4P35408 488 aa10.42□□□□□ -0.74
SDE2-201ENST00000272091 PER3P56645 1201 aa10.42□□□□□ -0.74
SDE2-201ENST00000272091 UBE2NP61088 152 aaKnown RBP10.42□□□□□ -0.74
SDE2-201ENST00000272091 PRDX4Q13162 271 aa10.42□□□□□ -0.74
SDE2-201ENST00000272091 DAZAP2Q15038 168 aaPredicted RBP10.42□□□□□ -0.74
SDE2-201ENST00000272091 RAB12Q6IQ22 244 aa10.42□□□□□ -0.74
SDE2-201ENST00000272091 MRPL21Q7Z2W9 205 aaKnown RBP10.42□□□□□ -0.74
SDE2-201ENST00000272091 FJX1Q86VR8 437 aa10.42□□□□□ -0.74
SDE2-201ENST00000272091 DOLPP1Q86YN1 238 aa10.42□□□□□ -0.74
SDE2-201ENST00000272091 CALHM1Q8IU99 346 aa10.42□□□□□ -0.74
SDE2-201ENST00000272091 C1QTNF6Q9BXI9 259 aa10.42□□□□□ -0.74
SDE2-201ENST00000272091 SELENOIQ9C0D9 397 aa10.42□□□□□ -0.74
SDE2-201ENST00000272091 GHRLQ9UBU3 117 aa10.42□□□□□ -0.74
SDE2-201ENST00000272091 PQLC2LA1A4F0 135 aa10.42□□□□□ -0.74
SDE2-201ENST00000272091 FIGNL2A6NMB9 653 aa10.42□□□□□ -0.74
SDE2-201ENST00000272091 CST4P01036 141 aa10.42□□□□□ -0.74
SDE2-201ENST00000272091 CRHP06850 196 aa10.42□□□□□ -0.74
SDE2-201ENST00000272091 CBR1P16152 277 aa10.42□□□□□ -0.74
SDE2-201ENST00000272091 RBP2P50120 134 aa10.42□□□□□ -0.74
SDE2-201ENST00000272091 TBC1D28Q2M2D7 210 aa10.42□□□□□ -0.74
SDE2-201ENST00000272091 SPATA46Q5T0L3 261 aa10.42□□□□□ -0.74
SDE2-201ENST00000272091 CDH24Q86UP0 819 aa10.42□□□□□ -0.74
SDE2-201ENST00000272091 NUDCD2Q8WVJ2 157 aa10.42□□□□□ -0.74
SDE2-201ENST00000272091 SCPEP1Q9HB40 452 aa10.42□□□□□ -0.74
SDE2-201ENST00000272091 FLVCR2Q9UPI3 526 aa10.42□□□□□ -0.74
SDE2-201ENST00000272091 NUBP2Q9Y5Y2 271 aa10.42□□□□□ -0.74
SDE2-201ENST00000272091 C1QTNF9BB2RNN3 333 aa10.41□□□□□ -0.74
SDE2-201ENST00000272091 PLATP00750 562 aa10.41□□□□□ -0.74
SDE2-201ENST00000272091 CD3DP04234 171 aa10.41□□□□□ -0.74
SDE2-201ENST00000272091 C1QTNF9P0C862 333 aa10.41□□□□□ -0.74
SDE2-201ENST00000272091 GSTT2BP0CG30 244 aa10.41□□□□□ -0.74
SDE2-201ENST00000272091 IFITM2Q01629 132 aa10.41□□□□□ -0.74
SDE2-201ENST00000272091 MALLQ13021 153 aa10.41□□□□□ -0.74
SDE2-201ENST00000272091 IGFBP7Q16270 282 aa10.41□□□□□ -0.74
SDE2-201ENST00000272091 ZNF835Q9Y2P0 537 aa10.41□□□□□ -0.74
SDE2-201ENST00000272091 CENPXA8MT69 81 aa10.41□□□□□ -0.74
SDE2-201ENST00000272091 MFNGO00587 321 aa10.41□□□□□ -0.74
SDE2-201ENST00000272091 HOXB1P14653 301 aaPredicted RBP10.41□□□□□ -0.74
SDE2-201ENST00000272091 FUT6P51993 359 aa10.41□□□□□ -0.74
SDE2-201ENST00000272091 AP3S2P59780 193 aa10.41□□□□□ -0.74
SDE2-201ENST00000272091 BTG1P62324 171 aa10.41□□□□□ -0.74
SDE2-201ENST00000272091 SSBP1Q04837 148 aaKnown RBP10.41□□□□□ -0.74
SDE2-201ENST00000272091 NCCRP1Q6ZVX7 275 aaPredicted RBP10.41□□□□□ -0.74
SDE2-201ENST00000272091 BTN2A1Q7KYR7 527 aa10.41□□□□□ -0.74
SDE2-201ENST00000272091 BORCS8Q96FH0 119 aa10.41□□□□□ -0.74
SDE2-201ENST00000272091 ASF1BQ9NVP2 202 aa10.41□□□□□ -0.74
SDE2-201ENST00000272091 CD300LBA8K4G0 201 aa10.41□□□□□ -0.74
SDE2-201ENST00000272091 CSF1P09603 554 aa10.41□□□□□ -0.74
SDE2-201ENST00000272091 SF3B4Q15427 424 aaKnown RBP eCLIP10.41□□□□□ -0.742e-6■■■■□ 19.3
SDE2-201ENST00000272091 GVQW1Q8N7I0 195 aa10.41□□□□□ -0.74
SDE2-201ENST00000272091 CHST4Q8NCG5 386 aa10.41□□□□□ -0.74
SDE2-201ENST00000272091 ARHGAP5-AS1Q96IT6 56 aa10.41□□□□□ -0.74
SDE2-201ENST00000272091 Q96M66 194 aa10.41□□□□□ -0.74
SDE2-201ENST00000272091 PAPOLGQ9BWT3 736 aaKnown RBP10.41□□□□□ -0.74
SDE2-201ENST00000272091 ZZEF1O43149 2961 aa10.41□□□□□ -0.74
SDE2-201ENST00000272091 NAP1L6A6NFF2 107 aa10.41□□□□□ -0.74
SDE2-201ENST00000272091 MSTNO14793 375 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms