RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 CSF1P09603 554 aa9.98□□□□□ -0.81
SCAF11-201ENST00000266589 TMEM225BP0DP42 221 aa9.98□□□□□ -0.81
SCAF11-201ENST00000266589 HOXB1P14653 301 aaPredicted RBP9.98□□□□□ -0.81
SCAF11-201ENST00000266589 TIMP3P35625 211 aa9.98□□□□□ -0.81
SCAF11-201ENST00000266589 TATDN3Q17R31 274 aa9.98□□□□□ -0.81
SCAF11-201ENST00000266589 ZNF260Q3ZCT1 412 aa9.98□□□□□ -0.81
SCAF11-201ENST00000266589 OLFML2AQ68BL7 652 aa9.98□□□□□ -0.81
SCAF11-201ENST00000266589 FAAP20Q6NZ36 180 aa9.98□□□□□ -0.81
SCAF11-201ENST00000266589 AQP3Q92482 292 aa9.98□□□□□ -0.81
SCAF11-201ENST00000266589 HPS1Q92902 700 aa9.98□□□□□ -0.81
SCAF11-201ENST00000266589 BOD1Q96IK1 185 aa9.98□□□□□ -0.81
SCAF11-201ENST00000266589 NUDT16L1Q9BRJ7 211 aaKnown RBP9.98□□□□□ -0.81
SCAF11-201ENST00000266589 URM1Q9BTM9 101 aaKnown RBP9.98□□□□□ -0.81
SCAF11-201ENST00000266589 PAPOLGQ9BWT3 736 aaKnown RBP9.98□□□□□ -0.81
SCAF11-201ENST00000266589 OPA3Q9H6K4 179 aa9.98□□□□□ -0.81
SCAF11-201ENST00000266589 SCPEP1Q9HB40 452 aa9.98□□□□□ -0.81
SCAF11-201ENST00000266589 NUDT15Q9NV35 164 aa9.98□□□□□ -0.81
SCAF11-201ENST00000266589 TAS2R8Q9NYW2 309 aa9.98□□□□□ -0.81
SCAF11-201ENST00000266589 COPZ2Q9P299 210 aa9.98□□□□□ -0.81
SCAF11-201ENST00000266589 GPR160Q9UJ42 338 aa9.98□□□□□ -0.81
SCAF11-201ENST00000266589 ATMQ13315 3056 aa9.97□□□□□ -0.81
SCAF11-201ENST00000266589 INTS1Q8N201 2190 aaKnown RBP9.97□□□□□ -0.81
SCAF11-201ENST00000266589 TRAV6A0A075B6T7 132 aa9.97□□□□□ -0.81
SCAF11-201ENST00000266589 INMT-MINDY4F8WBC2 141 aa9.97□□□□□ -0.81
SCAF11-201ENST00000266589 TCRBP04435 133 aa9.97□□□□□ -0.81
SCAF11-201ENST00000266589 FCER2P06734 321 aa9.97□□□□□ -0.81
SCAF11-201ENST00000266589 CHRM2P08172 466 aa9.97□□□□□ -0.81
SCAF11-201ENST00000266589 MGMTP16455 207 aa9.97□□□□□ -0.81
SCAF11-201ENST00000266589 FUT6P51993 359 aa9.97□□□□□ -0.81
SCAF11-201ENST00000266589 RAB25P57735 213 aa9.97□□□□□ -0.81
SCAF11-201ENST00000266589 ACTBP60709 375 aa9.97□□□□□ -0.81
SCAF11-201ENST00000266589 ACTG1P63261 375 aa9.97□□□□□ -0.81
SCAF11-201ENST00000266589 SSBP1Q04837 148 aaKnown RBP9.97□□□□□ -0.81
SCAF11-201ENST00000266589 MRPL49Q13405 166 aaKnown RBP9.97□□□□□ -0.81
SCAF11-201ENST00000266589 FAM189A2Q15884 450 aa9.97□□□□□ -0.81
SCAF11-201ENST00000266589 CDNFQ49AH0 187 aa9.97□□□□□ -0.81
SCAF11-201ENST00000266589 SFRP4Q6FHJ7 346 aaPredicted RBP9.97□□□□□ -0.81
SCAF11-201ENST00000266589 BEND4Q6ZU67 534 aa9.97□□□□□ -0.81
SCAF11-201ENST00000266589 WDR31Q8NA23 367 aa9.97□□□□□ -0.81
SCAF11-201ENST00000266589 OR5L1Q8NGL2 311 aa9.97□□□□□ -0.81
SCAF11-201ENST00000266589 CHAC2Q8WUX2 184 aa9.97□□□□□ -0.81
SCAF11-201ENST00000266589 SELENOIQ9C0D9 397 aa9.97□□□□□ -0.81
SCAF11-201ENST00000266589 CDH20Q9HBT6 801 aa9.97□□□□□ -0.81
SCAF11-201ENST00000266589 MCUBQ9NWR8 336 aa9.97□□□□□ -0.81
SCAF11-201ENST00000266589 NPAP1Q9NZP6 1156 aa9.97□□□□□ -0.81
SCAF11-201ENST00000266589 SPTBN4Q9H254 2564 aa9.97□□□□□ -0.81
SCAF11-201ENST00000266589 SPRY1O43609 319 aaPredicted RBP9.97□□□□□ -0.81
SCAF11-201ENST00000266589 ANGPTL7O43827 346 aa9.97□□□□□ -0.81
SCAF11-201ENST00000266589 AGFG2O95081 481 aa9.97□□□□□ -0.81
SCAF11-201ENST00000266589 GNB3P16520 340 aa9.97□□□□□ -0.81
SCAF11-201ENST00000266589 ATP1B3P54709 279 aa9.97□□□□□ -0.81
SCAF11-201ENST00000266589 RPS27AP62979 156 aaKnown RBP9.97□□□□□ -0.81
SCAF11-201ENST00000266589 P2RY6Q15077 328 aa9.97□□□□□ -0.81
SCAF11-201ENST00000266589 LINC00303Q3SY05 128 aa9.97□□□□□ -0.81
SCAF11-201ENST00000266589 RTN4RL2Q86UN3 420 aa9.97□□□□□ -0.81
SCAF11-201ENST00000266589 AKAP14Q86UN6 197 aa9.97□□□□□ -0.81
SCAF11-201ENST00000266589 CDH24Q86UP0 819 aa9.97□□□□□ -0.81
SCAF11-201ENST00000266589 CSNK2A3Q8NEV1 391 aa9.97□□□□□ -0.81
SCAF11-201ENST00000266589 OR56B1Q8NGI3 324 aa9.97□□□□□ -0.81
SCAF11-201ENST00000266589 SLX1AQ9BQ83 275 aa9.97□□□□□ -0.81
SCAF11-201ENST00000266589 C1QTNF6Q9BXI9 259 aa9.97□□□□□ -0.81
SCAF11-201ENST00000266589 CRIM1Q9NZV1 1036 aa9.97□□□□□ -0.81
SCAF11-201ENST00000266589 NUBP2Q9Y5Y2 271 aa9.97□□□□□ -0.81
SCAF11-201ENST00000266589 PTPRQQ9UMZ3 2332 aa9.96□□□□□ -0.81
SCAF11-201ENST00000266589 PRRG2O14669 202 aa9.96□□□□□ -0.81
SCAF11-201ENST00000266589 SOCS1O15524 211 aa9.96□□□□□ -0.81
SCAF11-201ENST00000266589 HOXD4P09016 255 aaPredicted RBP9.96□□□□□ -0.81
SCAF11-201ENST00000266589 GTF2F2P13984 249 aa9.96□□□□□ -0.81
SCAF11-201ENST00000266589 CBR1P16152 277 aa9.96□□□□□ -0.81
SCAF11-201ENST00000266589 FAUP35544 74 aaKnown RBP9.96□□□□□ -0.81
SCAF11-201ENST00000266589 PRDX4Q13162 271 aa9.96□□□□□ -0.81
SCAF11-201ENST00000266589 PRR30Q53SZ7 412 aaPredicted RBP9.96□□□□□ -0.81
SCAF11-201ENST00000266589 SPATA46Q5T0L3 261 aa9.96□□□□□ -0.81
SCAF11-201ENST00000266589 GFRALQ6UXV0 394 aa9.96□□□□□ -0.81
SCAF11-201ENST00000266589 BHLHA15Q7RTS1 189 aaPredicted RBP9.96□□□□□ -0.81
SCAF11-201ENST00000266589 FJX1Q86VR8 437 aa9.96□□□□□ -0.81
SCAF11-201ENST00000266589 C17orf78Q8N4C9 275 aa9.96□□□□□ -0.81
SCAF11-201ENST00000266589 FTMTQ8N4E7 242 aa9.96□□□□□ -0.81
SCAF11-201ENST00000266589 BHLHE23Q8NDY6 225 aa9.96□□□□□ -0.81
SCAF11-201ENST00000266589 OR51T1Q8NGJ9 327 aa9.96□□□□□ -0.81
SCAF11-201ENST00000266589 DEDD2Q8WXF8 326 aa9.96□□□□□ -0.81
SCAF11-201ENST00000266589 SNRNP40Q96DI7 357 aaKnown RBP9.96□□□□□ -0.81
SCAF11-201ENST00000266589 RAB3CQ96E17 227 aa9.96□□□□□ -0.81
SCAF11-201ENST00000266589 WBP1Q96G27 269 aa9.96□□□□□ -0.81
SCAF11-201ENST00000266589 METTL9Q9H1A3 318 aa9.96□□□□□ -0.81
SCAF11-201ENST00000266589 TP63Q9H3D4 680 aaPredicted RBP9.96□□□□□ -0.81
SCAF11-201ENST00000266589 EIF3KQ9UBQ5 218 aaKnown RBP9.96□□□□□ -0.81
SCAF11-201ENST00000266589 ALG5Q9Y673 324 aa9.96□□□□□ -0.81
SCAF11-201ENST00000266589 CD300LBA8K4G0 201 aa9.95□□□□□ -0.82
SCAF11-201ENST00000266589 J3QW42 95 aa9.95□□□□□ -0.82
SCAF11-201ENST00000266589 SMPD2O60906 423 aa9.95□□□□□ -0.82
SCAF11-201ENST00000266589 CST4P01036 141 aa9.95□□□□□ -0.82
SCAF11-201ENST00000266589 IGKV3-15P01624 115 aa9.95□□□□□ -0.82
SCAF11-201ENST00000266589 MELTFP08582 738 aa9.95□□□□□ -0.82
SCAF11-201ENST00000266589 GLI4P10075 376 aa9.95□□□□□ -0.82
SCAF11-201ENST00000266589 CEACAM8P31997 349 aaPredicted RBP9.95□□□□□ -0.82
SCAF11-201ENST00000266589 BTG1P62324 171 aa9.95□□□□□ -0.82
SCAF11-201ENST00000266589 RSU1Q15404 277 aa9.95□□□□□ -0.82
SCAF11-201ENST00000266589 BTN2A1Q7KYR7 527 aa9.95□□□□□ -0.82
SCAF11-201ENST00000266589 TRAPPC6BQ86SZ2 158 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms