RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 FAHD2BQ6P2I3 314 aaPredicted RBP16.25■□□□□ 0.19
LRP3-201ENST00000253193 CLEC9AQ6UXN8 241 aa16.25■□□□□ 0.19
LRP3-201ENST00000253193 FAM71E2Q8N5Q1 922 aa16.25■□□□□ 0.19
LRP3-201ENST00000253193 BHLHE23Q8NDY6 225 aa16.25■□□□□ 0.19
LRP3-201ENST00000253193 OR2M3Q8NG83 312 aa16.25■□□□□ 0.19
LRP3-201ENST00000253193 OR14L1PQ8NHC6 308 aa16.25■□□□□ 0.19
LRP3-201ENST00000253193 PHYHIPLQ96FC7 376 aa16.25■□□□□ 0.19
LRP3-201ENST00000253193 FAHD2AQ96GK7 314 aa16.25■□□□□ 0.19
LRP3-201ENST00000253193 NAA11Q9BSU3 229 aaPredicted RBP16.25■□□□□ 0.19
LRP3-201ENST00000253193 OCIAD1Q9NX40 245 aa16.25■□□□□ 0.19
LRP3-201ENST00000253193 TMEM218A2RU14 115 aa16.24■□□□□ 0.19
LRP3-201ENST00000253193 LRP3O75074 770 aa16.24■□□□□ 0.19
LRP3-201ENST00000253193 PHLDA2Q53GA4 152 aa16.24■□□□□ 0.19
LRP3-201ENST00000253193 SLC25A43Q8WUT9 341 aaPredicted RBP16.24■□□□□ 0.19
LRP3-201ENST00000253193 TAF9BQ9HBM6 251 aa16.24■□□□□ 0.19
LRP3-201ENST00000253193 PCDHGA1Q9Y5H4 931 aa16.24■□□□□ 0.19
LRP3-201ENST00000253193 A0A0A6YYD4 124 aa16.24■□□□□ 0.19
LRP3-201ENST00000253193 C5orf63A6NC05 138 aa16.24■□□□□ 0.19
LRP3-201ENST00000253193 MSGN1A6NI15 193 aa16.24■□□□□ 0.19
LRP3-201ENST00000253193 LINC01387J3KSC0 135 aa16.24■□□□□ 0.19
LRP3-201ENST00000253193 RRADP55042 308 aa16.24■□□□□ 0.19
LRP3-201ENST00000253193 ECH1Q13011 328 aa16.24■□□□□ 0.19
LRP3-201ENST00000253193 LYSMD4Q5XG99 296 aa16.24■□□□□ 0.19
LRP3-201ENST00000253193 CARFQ8N187 725 aa16.24■□□□□ 0.19
LRP3-201ENST00000253193 ZSCAN4Q8NAM6 433 aaPredicted RBP16.24■□□□□ 0.19
LRP3-201ENST00000253193 BORCS8Q96FH0 119 aa16.24■□□□□ 0.19
LRP3-201ENST00000253193 CMSS1Q9BQ75 279 aaKnown RBP16.24■□□□□ 0.19
LRP3-201ENST00000253193 FAM117AQ9C073 453 aa16.24■□□□□ 0.19
LRP3-201ENST00000253193 UBE2ZQ9H832 354 aaPredicted RBP16.24■□□□□ 0.19
LRP3-201ENST00000253193 NXT1Q9UKK6 140 aaKnown RBP16.24■□□□□ 0.19
LRP3-201ENST00000253193 IGHV3-9P01782 118 aa16.24■□□□□ 0.19
LRP3-201ENST00000253193 YRDCQ86U90 279 aaKnown RBP16.24■□□□□ 0.19
LRP3-201ENST00000253193 NFAM1Q8NET5 270 aaPredicted RBP16.24■□□□□ 0.19
LRP3-201ENST00000253193 ESRP2Q9H6T0 727 aaKnown RBP16.24■□□□□ 0.19
LRP3-201ENST00000253193 SLC33A1O00400 549 aaPredicted RBP16.23■□□□□ 0.19
LRP3-201ENST00000253193 TNFSF11O14788 317 aa16.23■□□□□ 0.19
LRP3-201ENST00000253193 ACTL6AO96019 429 aa16.23■□□□□ 0.19
LRP3-201ENST00000253193 FOSL2P15408 326 aa16.23■□□□□ 0.19
LRP3-201ENST00000253193 CEBPGP53567 150 aa16.23■□□□□ 0.19
LRP3-201ENST00000253193 ANKRD55Q3KP44 614 aa16.23■□□□□ 0.19
LRP3-201ENST00000253193 OR10C1Q96KK4 312 aa16.23■□□□□ 0.19
LRP3-201ENST00000253193 C2orf50Q96LR7 162 aa16.23■□□□□ 0.19
LRP3-201ENST00000253193 C12orf57Q99622 126 aa16.23■□□□□ 0.19
LRP3-201ENST00000253193 MRPL13Q9BYD1 178 aaKnown RBP16.23■□□□□ 0.19
LRP3-201ENST00000253193 MYOZ1Q9NP98 299 aaPredicted RBP16.23■□□□□ 0.19
LRP3-201ENST00000253193 GPR132Q9UNW8 380 aa16.23■□□□□ 0.19
LRP3-201ENST00000253193 HDGFL3Q9Y3E1 203 aa16.23■□□□□ 0.19
LRP3-201ENST00000253193 IFNA2P01563 188 aa16.23■□□□□ 0.19
LRP3-201ENST00000253193 OPN5Q6U736 354 aa16.23■□□□□ 0.19
LRP3-201ENST00000253193 SEMA6DQ8NFY4 1073 aa16.23■□□□□ 0.19
LRP3-201ENST00000253193 OR13G1Q8NGZ3 307 aa16.23■□□□□ 0.19
LRP3-201ENST00000253193 OR6S1Q8NH40 331 aa16.23■□□□□ 0.19
LRP3-201ENST00000253193 FAAP24Q9BTP7 215 aa16.23■□□□□ 0.19
LRP3-201ENST00000253193 DHHO43323 396 aa16.23■□□□□ 0.19
LRP3-201ENST00000253193 FPR2P25090 351 aa16.23■□□□□ 0.19
LRP3-201ENST00000253193 SPIN3Q5JUX0 258 aa16.23■□□□□ 0.19
LRP3-201ENST00000253193 C9orf135Q5VTT2 229 aa16.23■□□□□ 0.19
LRP3-201ENST00000253193 RPL7L1Q6DKI1 246 aaKnown RBP16.23■□□□□ 0.19
LRP3-201ENST00000253193 DRAM2Q6UX65 266 aa16.23■□□□□ 0.19
LRP3-201ENST00000253193 RRNAD1Q96FB5 475 aaKnown RBP16.23■□□□□ 0.19
LRP3-201ENST00000253193 ARPC4-TTLL3A0A0A6YYG9 625 aa16.22■□□□□ 0.19
LRP3-201ENST00000253193 NFYBP25208 207 aa16.22■□□□□ 0.19
LRP3-201ENST00000253193 FLI1Q01543 452 aaPredicted RBP16.22■□□□□ 0.19
LRP3-201ENST00000253193 MEX3BQ6ZN04 569 aaKnown RBP16.22■□□□□ 0.19
LRP3-201ENST00000253193 TDHQ8IZJ6 230 aa16.22■□□□□ 0.19
LRP3-201ENST00000253193 DUSP23Q9BVJ7 150 aa16.22■□□□□ 0.19
LRP3-201ENST00000253193 TLNRD1Q9H1K6 362 aa16.22■□□□□ 0.19
LRP3-201ENST00000253193 ZNF442Q9H7R0 627 aa16.22■□□□□ 0.19
LRP3-201ENST00000253193 C1orf123Q9NWV4 160 aa16.22■□□□□ 0.19
LRP3-201ENST00000253193 CFPP27918 469 aa16.22■□□□□ 0.19
LRP3-201ENST00000253193 RBM39Q14498 530 aaKnown RBP16.22■□□□□ 0.19
LRP3-201ENST00000253193 MRGPRFQ96AM1 343 aa16.22■□□□□ 0.19
LRP3-201ENST00000253193 RAB18Q9NP72 206 aa16.22■□□□□ 0.19
LRP3-201ENST00000253193 IL2RAP01589 272 aa16.22■□□□□ 0.19
LRP3-201ENST00000253193 OTX2P32243 289 aa16.22■□□□□ 0.19
LRP3-201ENST00000253193 CD80P33681 288 aa16.22■□□□□ 0.19
LRP3-201ENST00000253193 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.22■□□□□ 0.193e-6■■■■□ 23.2
LRP3-201ENST00000253193 A0A1W2PQM1 296 aa16.21■□□□□ 0.19
LRP3-201ENST00000253193 DIRAS3O95661 229 aa16.21■□□□□ 0.19
LRP3-201ENST00000253193 PNLIPRP3Q17RR3 467 aa16.21■□□□□ 0.19
LRP3-201ENST00000253193 SLC25A47Q6Q0C1 308 aa16.21■□□□□ 0.19
LRP3-201ENST00000253193 FAM180AQ6UWF9 173 aa16.21■□□□□ 0.19
LRP3-201ENST00000253193 GPR137CQ8N3F9 429 aa16.21■□□□□ 0.19
LRP3-201ENST00000253193 SPEM1Q8N4L4 309 aa16.21■□□□□ 0.19
LRP3-201ENST00000253193 PIGCQ92535 297 aa16.21■□□□□ 0.19
LRP3-201ENST00000253193 EMG1Q92979 244 aaKnown RBP16.21■□□□□ 0.19
LRP3-201ENST00000253193 ZC3H10Q96K80 434 aaKnown RBP16.21■□□□□ 0.19
LRP3-201ENST00000253193 USB1Q9BQ65 265 aaKnown RBP16.21■□□□□ 0.19
LRP3-201ENST00000253193 PECRQ9BY49 303 aa16.21■□□□□ 0.19
LRP3-201ENST00000253193 METTL9Q9H1A3 318 aa16.21■□□□□ 0.19
LRP3-201ENST00000253193 FN3KRPQ9HA64 309 aa16.21■□□□□ 0.19
LRP3-201ENST00000253193 IGHV5-10-1A0A0J9YXX1 117 aa16.21■□□□□ 0.19
LRP3-201ENST00000253193 M0R036 132 aa16.21■□□□□ 0.19
LRP3-201ENST00000253193 OR5H8P0DN80 308 aa16.21■□□□□ 0.19
LRP3-201ENST00000253193 HTR5AP47898 357 aa16.21■□□□□ 0.19
LRP3-201ENST00000253193 PPT1P50897 306 aa16.21■□□□□ 0.19
LRP3-201ENST00000253193 AKR7LQ8NHP1 331 aa16.21■□□□□ 0.19
LRP3-201ENST00000253193 ALKBH3Q96Q83 286 aaPredicted RBP16.21■□□□□ 0.19
LRP3-201ENST00000253193 NMES1Q9C002 83 aa16.21■□□□□ 0.19
LRP3-201ENST00000253193 TGIF2Q9GZN2 237 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms