RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 OR10A2Q9H208 303 aa10.9□□□□□ -0.66
NUP88-201ENST00000225696 GSN-AS1Q9NRJ2 163 aa10.9□□□□□ -0.66
NUP88-201ENST00000225696 DNAJB11Q9UBS4 358 aa10.9□□□□□ -0.66
NUP88-201ENST00000225696 MCTS1Q9ULC4 181 aaKnown RBP10.9□□□□□ -0.66
NUP88-201ENST00000225696 MMP17Q9ULZ9 603 aa10.9□□□□□ -0.66
NUP88-201ENST00000225696 RALGAPA1Q6GYQ0 2036 aa10.9□□□□□ -0.66
NUP88-201ENST00000225696 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.9□□□□□ -0.66
NUP88-201ENST00000225696 A0A1W2PNR3 127 aa10.9□□□□□ -0.66
NUP88-201ENST00000225696 hCG_1809904A0A1W2PP81 198 aa10.9□□□□□ -0.66
NUP88-201ENST00000225696 A0A1W2PPH5 198 aa10.9□□□□□ -0.66
NUP88-201ENST00000225696 A0A1W2PR64 198 aa10.9□□□□□ -0.66
NUP88-201ENST00000225696 A0A1W2PRV1 198 aa10.9□□□□□ -0.66
NUP88-201ENST00000225696 ANKUB1A6NFN9 424 aa10.9□□□□□ -0.66
NUP88-201ENST00000225696 MASP2O00187 686 aa10.9□□□□□ -0.66
NUP88-201ENST00000225696 GIMD1P0DJR0 217 aa10.9□□□□□ -0.66
NUP88-201ENST00000225696 GLI4P10075 376 aa10.9□□□□□ -0.66
NUP88-201ENST00000225696 SERPINA2P20848 420 aa10.9□□□□□ -0.66
NUP88-201ENST00000225696 FBLP22087 321 aaKnown RBP10.9□□□□□ -0.66
NUP88-201ENST00000225696 DVL1P1P54792 670 aaPredicted RBP10.9□□□□□ -0.66
NUP88-201ENST00000225696 S100A12P80511 92 aa10.9□□□□□ -0.66
NUP88-201ENST00000225696 EIF2S3LQ2VIR3 472 aaKnown RBP10.9□□□□□ -0.66
NUP88-201ENST00000225696 C6orf201Q7Z4U5 140 aa10.9□□□□□ -0.66
NUP88-201ENST00000225696 OR56B1Q8NGI3 324 aa10.9□□□□□ -0.66
NUP88-201ENST00000225696 TMEM234Q8WY98 164 aa10.9□□□□□ -0.66
NUP88-201ENST00000225696 LYZL4Q96KX0 146 aa10.9□□□□□ -0.66
NUP88-201ENST00000225696 TPSD1Q9BZJ3 242 aa10.9□□□□□ -0.66
NUP88-201ENST00000225696 B3GALT5Q9Y2C3 310 aa10.9□□□□□ -0.66
NUP88-201ENST00000225696 RPH3AQ9Y2J0 694 aaPredicted RBP10.9□□□□□ -0.66
NUP88-201ENST00000225696 LSM5Q9Y4Y9 91 aaKnown RBP10.9□□□□□ -0.66
NUP88-201ENST00000225696 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.89□□□□□ -0.67
NUP88-201ENST00000225696 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.89□□□□□ -0.67
NUP88-201ENST00000225696 LILRA5A6NI73 299 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 ZNF878C9JN71 531 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 K7EPK0 472 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 CST4P01036 141 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 ZNF806P0C7X5 589 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 PGA4P0DJD7 388 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 PGA3P0DJD8 388 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 CCR5P51681 352 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 RAB5BP61020 215 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 KISS1Q15726 138 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 SP6Q3SY56 376 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 ACTBL2Q562R1 376 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 AWAT1Q58HT5 328 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 FAM89BQ8N5H3 189 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 FAM71E2Q8N5Q1 922 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 SHDQ96IW2 340 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 CDCA3Q99618 268 aaPredicted RBP10.89□□□□□ -0.67
NUP88-201ENST00000225696 PECRQ9BY49 303 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 WFDC1Q9HC57 220 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 PARP11Q9NR21 331 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 ZNF701Q9NV72 531 aaPredicted RBP10.89□□□□□ -0.67
NUP88-201ENST00000225696 COL5A1P20908 1838 aaPredicted RBP10.89□□□□□ -0.67
NUP88-201ENST00000225696 SHANK1Q9Y566 2161 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 TRAV20A0A0B4J274 112 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 A0A1B0GV50 99 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 C7orf77A4D0Y5 90 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 STMND1H3BQB6 276 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 DEDDO75618 318 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 SCGB1D2O95969 90 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 IFNA2P01563 188 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 ARG1P05089 322 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 FABP1P07148 127 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 ACKR3P25106 362 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 CLRN1P58418 232 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 GABREP78334 506 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 SHHQ15465 462 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 UBE2V2Q15819 145 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 MIDNQ504T8 468 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 ABCA7Q8IZY2 2146 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 APCDD1LQ8NCL9 501 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 SEMA6DQ8NFY4 1073 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 LYPD6BQ8NI32 183 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 POC1BQ8TC44 478 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 RHBDD1Q8TEB9 315 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 OR5B2Q96R09 309 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 RAB33BQ9H082 229 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 RFNGQ9Y644 331 aa10.89□□□□□ -0.67
NUP88-201ENST00000225696 UBE2CO00762 179 aa10.88□□□□□ -0.67
NUP88-201ENST00000225696 AGAP20933 346 aa10.88□□□□□ -0.67
NUP88-201ENST00000225696 APOBEC1P41238 236 aaKnown RBP10.88□□□□□ -0.67
NUP88-201ENST00000225696 RRADP55042 308 aa10.88□□□□□ -0.67
NUP88-201ENST00000225696 FABP9Q0Z7S8 132 aa10.88□□□□□ -0.67
NUP88-201ENST00000225696 SMCO1Q147U7 214 aa10.88□□□□□ -0.67
NUP88-201ENST00000225696 CHRFAM7AQ494W8 412 aa10.88□□□□□ -0.67
NUP88-201ENST00000225696 KRBOX4Q5JUW0 171 aa10.88□□□□□ -0.67
NUP88-201ENST00000225696 FAM209BQ5JX69 171 aa10.88□□□□□ -0.67
NUP88-201ENST00000225696 GGNBP1Q5YKI7 109 aa10.88□□□□□ -0.67
NUP88-201ENST00000225696 C15orf54Q8N8G6 183 aa10.88□□□□□ -0.67
NUP88-201ENST00000225696 OR2AJ1Q8NGZ0 328 aa10.88□□□□□ -0.67
NUP88-201ENST00000225696 OR14K1Q8NGZ2 314 aa10.88□□□□□ -0.67
NUP88-201ENST00000225696 ST8SIA1Q92185 356 aa10.88□□□□□ -0.67
NUP88-201ENST00000225696 DDIT4LQ96D03 193 aa10.88□□□□□ -0.67
NUP88-201ENST00000225696 ZNF2Q9BSG1 426 aaPredicted RBP10.88□□□□□ -0.67
NUP88-201ENST00000225696 SH3BGRL3Q9H299 93 aa10.88□□□□□ -0.67
NUP88-201ENST00000225696 NIT2Q9NQR4 276 aa10.88□□□□□ -0.67
NUP88-201ENST00000225696 STARD10Q9Y365 291 aa10.88□□□□□ -0.67
NUP88-201ENST00000225696 NPIPB13A6NJU9 1138 aa10.87□□□□□ -0.67
NUP88-201ENST00000225696 FIGNL2A6NMB9 653 aa10.87□□□□□ -0.67
NUP88-201ENST00000225696 C1orf196B1AJZ1 125 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms