RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Gm21149A0A0G2JFY7 255 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Fbxw27A0A1D5RLF0 466 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 CtcflA2APF3 636 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Yjefn3F6W8I0 251 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Gm6576F6YTZ4 274 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Zfp2P08043 459 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Cdh3P10287 822 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Lire1P11260 357 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Itgb2P11835 771 aaKnown RBP18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Gpm6aP35802 278 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Drd4P51436 387 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 CbfbQ08024 187 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 NmsQ5H8A1 153 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Tdpoz5Q6YCH1 340 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Plekhm1Q7TSI1 1074 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Gm11541Q8C4D8 108 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 FlcnQ8QZS3 579 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Naa40Q8VE10 237 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Tex44Q9DA60 530 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Tas2r105Q9JKT4 300 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Clcf1Q9QZM3 225 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Pkd1l2Q7TN88 2461 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Akap9Q70FJ1 3797 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Olfr420E9Q4G0 321 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Tmem44E9Q4M0 433 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Olfr895L7N210 316 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Prl7a1O54830 266 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Gsta1P13745 223 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Il5raP21183 415 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Prr27Q3SYJ2 352 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Adam5Q3TTE0 751 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Ube2fbQ3UWQ3 185 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Fbxw22Q5XG67 466 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 HpQ61646 347 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Gsta1Q6P8Q0 223 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Olfr804Q7TRH7 314 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Olfr285Q7TS17 319 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Fmr1nbQ80ZA7 238 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Fndc9Q8BJN4 226 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Rps19bp1Q8C6B9 143 aaKnown RBP18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Galnt6Q8C7U7 622 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 C1saQ8CG14 688 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Olfr131Q8VGC8 314 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 NifkQ91VE6 317 aaKnown RBP18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Ubl7Q91W67 380 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Pex16Q91XC9 336 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Washc3Q9CR27 194 aa18.57■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Shank1D3YZU1 2167 aa18.56■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Gm3543D3Z235 184 aa18.56■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Gm21981D3Z6Q6 369 aa18.56■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 H2-M1F7CXU4 344 aa18.56■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 D430019H16RikJ3QPM6 83 aa18.56■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Vmn2r30K7N5W1 852 aa18.56■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Ccl20O89093 97 aa18.56■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Camk2bP28652 542 aa18.56■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Fbxo5Q7TSG3 421 aa18.56■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Hyal5Q812F3 526 aa18.56■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Clec9aQ8BRU4 238 aa18.56■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Pskh1Q91YA2 424 aa18.56■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 GmppaQ922H4 420 aa18.56■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Tpra1Q99MU1 369 aa18.56■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Ca15Q99N23 324 aa18.56■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Plpp6Q9D4F2 292 aa18.56■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Mdp1Q9D967 164 aa18.56■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Dopey2Q3UHQ6 2295 aa18.56■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Vmn1r82A0A087WRV1 305 aa18.55■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Tarm1B6A8R8 288 aa18.55■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 NnmtO55239 264 aa18.55■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 JtbO88824 146 aa18.55■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Tp63O88898 680 aa18.55■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Tpi1P17751 299 aaKnown RBP18.55■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Pcbd1P61458 104 aa18.55■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 TsxP70675 144 aa18.55■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Rab35Q6PHN9 201 aa18.55■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Slc5a7Q8BGY9 580 aa18.55■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Q8BTG6 205 aa18.55■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Gpat4Q8K2C8 456 aa18.55■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Phospho1Q8R2H9 267 aa18.55■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Myct1Q8R411 188 aa18.55■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Nrif2Q921B4 824 aa18.55■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Rtn4rQ99PI8 473 aa18.55■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Syt9Q9R0N9 491 aa18.55■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Igkv19-93A0A0G2JFZ3 115 aa18.54■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Gm4881A0A140LIR9 352 aa18.54■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Olfr911-ps1A0A140T8K0 311 aa18.54■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Sdccag3A2AIW0 432 aa18.54■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Ndufaf5A2APY7 343 aa18.54■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Olfr1179A2AUS6 307 aa18.54■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Wsb1O54927 421 aa18.54■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Arl6O88848 186 aa18.54■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 PtcraP0C6B2 199 aa18.54■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Cd28P31041 218 aa18.54■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Elk1P41969 429 aa18.54■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Arf1P84078 181 aa18.54■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 MamstrQ0ZCJ7 421 aa18.54■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Hectd3Q3U487 861 aa18.54■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Nufip2Q5F2E7 692 aaKnown RBP18.54■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Slc25a26Q5U680 274 aa18.54■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 Coq8aQ60936 645 aa18.54■□□□□ 0.56
Ccdc88a-202ENSMUST00000109477 St6gal2Q76K27 524 aa18.54■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 37.1 ms