RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 ZNF676Q8N7Q3 588 aa10.78□□□□□ -0.68
PNKP-217ENST00000625216 OR8B12Q8NGG6 310 aa10.78□□□□□ -0.68
PNKP-217ENST00000625216 OR5AK2Q8NH90 309 aa10.78□□□□□ -0.68
PNKP-217ENST00000625216 ABHD4Q8TB40 342 aa10.78□□□□□ -0.68
PNKP-217ENST00000625216 MSI2Q96DH6 328 aaKnown RBP10.78□□□□□ -0.68
PNKP-217ENST00000625216 BEX2Q9BXY8 128 aa10.78□□□□□ -0.68
PNKP-217ENST00000625216 PBOV1Q9GZY1 135 aa10.78□□□□□ -0.68
PNKP-217ENST00000625216 MOB1AQ9H8S9 216 aa10.78□□□□□ -0.68
PNKP-217ENST00000625216 CHODLQ9H9P2 273 aa10.78□□□□□ -0.68
PNKP-217ENST00000625216 NKIRAS2Q9NYR9 191 aa10.78□□□□□ -0.68
PNKP-217ENST00000625216 PTTG2Q9NZH5 202 aa10.78□□□□□ -0.68
PNKP-217ENST00000625216 TAAR3PQ9P1P4 343 aa10.78□□□□□ -0.68
PNKP-217ENST00000625216 NUFIP1Q9UHK0 495 aaKnown RBP10.78□□□□□ -0.68
PNKP-217ENST00000625216 FZR1Q9UM11 496 aa10.78□□□□□ -0.68
PNKP-217ENST00000625216 ZNF281Q9Y2X9 895 aa10.78□□□□□ -0.68
PNKP-217ENST00000625216 LOC107986453A0A1B0GWG9 222 aa10.77□□□□□ -0.69
PNKP-217ENST00000625216 C5orf49A4QMS7 147 aa10.77□□□□□ -0.69
PNKP-217ENST00000625216 C17orf100A8MU93 164 aa10.77□□□□□ -0.69
PNKP-217ENST00000625216 H3BSH0 61 aa10.77□□□□□ -0.69
PNKP-217ENST00000625216 M0R135 149 aa10.77□□□□□ -0.69
PNKP-217ENST00000625216 ICMTO60725 284 aa10.77□□□□□ -0.69
PNKP-217ENST00000625216 LILRA1O75019 489 aa10.77□□□□□ -0.69
PNKP-217ENST00000625216 IGHV3-13P01766 116 aa10.77□□□□□ -0.69
PNKP-217ENST00000625216 COX5BP10606 129 aa10.77□□□□□ -0.69
PNKP-217ENST00000625216 ACHEP22303 614 aa10.77□□□□□ -0.69
PNKP-217ENST00000625216 CCNOP22674 350 aa10.77□□□□□ -0.69
PNKP-217ENST00000625216 SERPINB10P48595 397 aa10.77□□□□□ -0.69
PNKP-217ENST00000625216 ZNF718Q3SXZ3 478 aa10.77□□□□□ -0.69
PNKP-217ENST00000625216 ACSM3Q53FZ2 586 aa10.77□□□□□ -0.69
PNKP-217ENST00000625216 YIF1BQ5BJH7 314 aa10.77□□□□□ -0.69
PNKP-217ENST00000625216 UNQ9370/PRO34162Q6UXP9 181 aa10.77□□□□□ -0.69
PNKP-217ENST00000625216 NAA40Q86UY6 237 aa10.77□□□□□ -0.69
PNKP-217ENST00000625216 RDH10Q8IZV5 341 aa10.77□□□□□ -0.69
PNKP-217ENST00000625216 MS4A15Q8N5U1 240 aa10.77□□□□□ -0.69
PNKP-217ENST00000625216 OR51A4Q8NGJ6 313 aa10.77□□□□□ -0.69
PNKP-217ENST00000625216 OR1J1Q8NGS3 322 aa10.77□□□□□ -0.69
PNKP-217ENST00000625216 DYNC2LI1Q8TCX1 351 aa10.77□□□□□ -0.69
PNKP-217ENST00000625216 ZNF799Q96GE5 643 aa10.77□□□□□ -0.69
PNKP-217ENST00000625216 OR14A2Q96R54 314 aa10.77□□□□□ -0.69
PNKP-217ENST00000625216 COMMD4Q9H0A8 199 aa10.77□□□□□ -0.69
PNKP-217ENST00000625216 SHARPINQ9H0F6 387 aa10.77□□□□□ -0.69
PNKP-217ENST00000625216 DCSTAMPQ9H295 470 aa10.77□□□□□ -0.69
PNKP-217ENST00000625216 PPIL3Q9H2H8 161 aaKnown RBP10.77□□□□□ -0.69
PNKP-217ENST00000625216 ZNF319Q9P2F9 582 aa10.77□□□□□ -0.69
PNKP-217ENST00000625216 MYEF2Q9P2K5 600 aaKnown RBP10.77□□□□□ -0.69
PNKP-217ENST00000625216 ATPIF1Q9UII2 106 aa10.77□□□□□ -0.69
PNKP-217ENST00000625216 ATRQ13535 2644 aa10.77□□□□□ -0.69
PNKP-217ENST00000625216 RTTNQ86VV8 2226 aa10.76□□□□□ -0.69
PNKP-217ENST00000625216 LOC100509620A0A075B734 347 aa10.76□□□□□ -0.69
PNKP-217ENST00000625216 ACOD1A6NK06 481 aa10.76□□□□□ -0.69
PNKP-217ENST00000625216 F5H5K5 113 aa10.76□□□□□ -0.69
PNKP-217ENST00000625216 P2RY10O00398 339 aa10.76□□□□□ -0.69
PNKP-217ENST00000625216 PIN1P1O15428 100 aa10.76□□□□□ -0.69
PNKP-217ENST00000625216 TGFAP01135 160 aa10.76□□□□□ -0.69
PNKP-217ENST00000625216 HPXP02790 462 aa10.76□□□□□ -0.69
PNKP-217ENST00000625216 ANXA2P07355 339 aaKnown RBP10.76□□□□□ -0.69
PNKP-217ENST00000625216 ACSM4P0C7M7 580 aa10.76□□□□□ -0.69
PNKP-217ENST00000625216 CLEC2LP0C7M8 214 aa10.76□□□□□ -0.69
PNKP-217ENST00000625216 NAT2P11245 290 aa10.76□□□□□ -0.69
PNKP-217ENST00000625216 ZNF16P17020 682 aaPredicted RBP10.76□□□□□ -0.69
PNKP-217ENST00000625216 ZNF182P17025 639 aaPredicted RBP10.76□□□□□ -0.69
PNKP-217ENST00000625216 TUBG1P23258 451 aa10.76□□□□□ -0.69
PNKP-217ENST00000625216 GCH1P30793 250 aa10.76□□□□□ -0.69
PNKP-217ENST00000625216 THBS2P35442 1172 aa10.76□□□□□ -0.69
PNKP-217ENST00000625216 ECH1Q13011 328 aa10.76□□□□□ -0.69
PNKP-217ENST00000625216 ZMAT1Q5H9K5 638 aa10.76□□□□□ -0.69
PNKP-217ENST00000625216 FAM209AQ5JX71 171 aa10.76□□□□□ -0.69
PNKP-217ENST00000625216 USP43Q70EL4 1123 aa10.76□□□□□ -0.69
PNKP-217ENST00000625216 FAM57BQ71RH2 274 aa10.76□□□□□ -0.69
PNKP-217ENST00000625216 CEACAM19Q7Z692 300 aa10.76□□□□□ -0.69
PNKP-217ENST00000625216 ELMOD2Q8IZ81 293 aa10.76□□□□□ -0.69
PNKP-217ENST00000625216 SPTSSAQ969W0 71 aa10.76□□□□□ -0.69
PNKP-217ENST00000625216 ORAI1Q96D31 301 aa10.76□□□□□ -0.69
PNKP-217ENST00000625216 C1orf159Q96HA4 380 aa10.76□□□□□ -0.69
PNKP-217ENST00000625216 DERL3Q96Q80 235 aa10.76□□□□□ -0.69
PNKP-217ENST00000625216 TUBG2Q9NRH3 451 aa10.76□□□□□ -0.69
PNKP-217ENST00000625216 TRBV5-7A0A0A0MS05 114 aa10.75□□□□□ -0.69
PNKP-217ENST00000625216 A0A1B0GTI1 187 aa10.75□□□□□ -0.69
PNKP-217ENST00000625216 LYNX1G3V0Z9 82 aa10.75□□□□□ -0.69
PNKP-217ENST00000625216 GATBO75879 557 aaKnown RBP10.75□□□□□ -0.69
PNKP-217ENST00000625216 SERPINA3P01011 423 aa10.75□□□□□ -0.69
PNKP-217ENST00000625216 UCHL1P09936 223 aa10.75□□□□□ -0.69
PNKP-217ENST00000625216 UBCP0CG48 685 aaKnown RBP10.75□□□□□ -0.69
PNKP-217ENST00000625216 LYNX1P0DP58 116 aa10.75□□□□□ -0.69
PNKP-217ENST00000625216 HNF1AP20823 631 aa10.75□□□□□ -0.69
PNKP-217ENST00000625216 COL8A2P25067 703 aa10.75□□□□□ -0.69
PNKP-217ENST00000625216 WNT5AP41221 380 aa10.75□□□□□ -0.69
PNKP-217ENST00000625216 GPR6P46095 362 aaPredicted RBP10.75□□□□□ -0.69
PNKP-217ENST00000625216 SLC6A9P48067 706 aa10.75□□□□□ -0.69
PNKP-217ENST00000625216 SOX2P48431 317 aa10.75□□□□□ -0.69
PNKP-217ENST00000625216 ERVS71-1P61550 626 aa10.75□□□□□ -0.69
PNKP-217ENST00000625216 Q499Y3 187 aa10.75□□□□□ -0.69
PNKP-217ENST00000625216 MBNL2Q5VZF2 373 aaKnown RBP10.75□□□□□ -0.69
PNKP-217ENST00000625216 DRAM2Q6UX65 266 aa10.75□□□□□ -0.69
PNKP-217ENST00000625216 LINC01356Q8N9X3 169 aa10.75□□□□□ -0.69
PNKP-217ENST00000625216 GPR148Q8TDV2 347 aa10.75□□□□□ -0.69
PNKP-217ENST00000625216 MARS2Q96GW9 593 aaKnown RBP10.75□□□□□ -0.69
PNKP-217ENST00000625216 PGAM5Q96HS1 289 aa10.75□□□□□ -0.69
PNKP-217ENST00000625216 KCTD7Q96MP8 289 aa10.75□□□□□ -0.69
PNKP-217ENST00000625216 SOX7Q9BT81 388 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms