RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 MYL9P24844 172 aa13.73□□□□□ -0.21
CD40-207ENST00000620709 SDC2P34741 201 aa13.73□□□□□ -0.21
CD40-207ENST00000620709 APLNRP35414 380 aa13.73□□□□□ -0.21
CD40-207ENST00000620709 MMP16P51512 607 aa13.73□□□□□ -0.21
CD40-207ENST00000620709 PSMA6P60900 246 aaKnown RBP13.73□□□□□ -0.21
CD40-207ENST00000620709 PCBD1P61457 104 aa13.73□□□□□ -0.21
CD40-207ENST00000620709 ERVS71-1P61550 626 aa13.73□□□□□ -0.21
CD40-207ENST00000620709 RPS11P62280 158 aaKnown RBP eCLIP13.73□□□□□ -0.21
CD40-207ENST00000620709 KRTAP24-1Q3LI83 254 aa13.73□□□□□ -0.21
CD40-207ENST00000620709 ZMAT1Q5H9K5 638 aa13.73□□□□□ -0.21
CD40-207ENST00000620709 SYT9Q86SS6 491 aa13.73□□□□□ -0.21
CD40-207ENST00000620709 OR1J2Q8NGS2 313 aa13.73□□□□□ -0.21
CD40-207ENST00000620709 OR13C5Q8NGS8 318 aa13.73□□□□□ -0.21
CD40-207ENST00000620709 SYNPRQ8TBG9 265 aa13.73□□□□□ -0.21
CD40-207ENST00000620709 THRSPQ92748 146 aa13.73□□□□□ -0.21
CD40-207ENST00000620709 RDH5Q92781 318 aa13.73□□□□□ -0.21
CD40-207ENST00000620709 HPS1Q92902 700 aa13.73□□□□□ -0.21
CD40-207ENST00000620709 ATF6BQ99941 703 aa13.73□□□□□ -0.21
CD40-207ENST00000620709 SLIRPQ9GZT3 109 aaKnown RBP13.73□□□□□ -0.21
CD40-207ENST00000620709 MOB1AQ9H8S9 216 aa13.73□□□□□ -0.21
CD40-207ENST00000620709 LPAR2Q9HBW0 351 aa13.73□□□□□ -0.21
CD40-207ENST00000620709 DDX28Q9NUL7 540 aaKnown RBP13.73□□□□□ -0.21
CD40-207ENST00000620709 TPD52L2O43399 206 aaKnown RBP13.72□□□□□ -0.21
CD40-207ENST00000620709 CDC14BO60729 498 aa13.72□□□□□ -0.21
CD40-207ENST00000620709 ARL6IP5O75915 188 aa13.72□□□□□ -0.21
CD40-207ENST00000620709 PNPP00491 289 aa13.72□□□□□ -0.21
CD40-207ENST00000620709 MAPK3P27361 379 aaPredicted RBP13.72□□□□□ -0.21
CD40-207ENST00000620709 RPS19P39019 145 aaKnown RBP13.72□□□□□ -0.21
CD40-207ENST00000620709 MAGEB1P43366 347 aa13.72□□□□□ -0.21
CD40-207ENST00000620709 MTNR1BP49286 362 aa13.72□□□□□ -0.21
CD40-207ENST00000620709 KLF3P57682 345 aaPredicted RBP13.72□□□□□ -0.21
CD40-207ENST00000620709 DPPA2Q7Z7J5 298 aa13.72□□□□□ -0.21
CD40-207ENST00000620709 RGP1Q92546 391 aaPredicted RBP13.72□□□□□ -0.21
CD40-207ENST00000620709 YIPF5Q969M3 257 aa13.72□□□□□ -0.21
CD40-207ENST00000620709 OR14A2Q96R54 314 aa13.72□□□□□ -0.21
CD40-207ENST00000620709 SNTG1Q9NSN8 517 aa13.72□□□□□ -0.21
CD40-207ENST00000620709 PLEK2Q9NYT0 353 aa13.72□□□□□ -0.21
CD40-207ENST00000620709 GPR160Q9UJ42 338 aa13.72□□□□□ -0.21
CD40-207ENST00000620709 OR52A1Q9UKL2 312 aa13.72□□□□□ -0.21
CD40-207ENST00000620709 SLC22A13Q9Y226 551 aa13.72□□□□□ -0.21
CD40-207ENST00000620709 A3GALT2U3KPV4 340 aa13.72□□□□□ -0.21
CD40-207ENST00000620709 ZNF879B4DU55 563 aa13.71□□□□□ -0.21
CD40-207ENST00000620709 NCR1O76036 304 aa13.71□□□□□ -0.21
CD40-207ENST00000620709 UCHL1P09936 223 aa13.71□□□□□ -0.21
CD40-207ENST00000620709 ACHEP22303 614 aa13.71□□□□□ -0.21
CD40-207ENST00000620709 CALRP27797 417 aaKnown RBP13.71□□□□□ -0.21
CD40-207ENST00000620709 RAD52P43351 418 aa13.71□□□□□ -0.21
CD40-207ENST00000620709 RORCP51449 518 aa13.71□□□□□ -0.21
CD40-207ENST00000620709 MXD1Q05195 221 aa13.71□□□□□ -0.21
CD40-207ENST00000620709 ZNF404Q494X3 552 aa13.71□□□□□ -0.21
CD40-207ENST00000620709 Q499Y3 187 aa13.71□□□□□ -0.21
CD40-207ENST00000620709 CCDC92Q53HC0 331 aaPredicted RBP13.71□□□□□ -0.21
CD40-207ENST00000620709 PABPC1L2AQ5JQF8 200 aa13.71□□□□□ -0.21
CD40-207ENST00000620709 BCL2L15Q5TBC7 163 aa13.71□□□□□ -0.21
CD40-207ENST00000620709 UNQ9370/PRO34162Q6UXP9 181 aa13.71□□□□□ -0.21
CD40-207ENST00000620709 MCFD2Q8NI22 146 aa13.71□□□□□ -0.21
CD40-207ENST00000620709 GPR148Q8TDV2 347 aa13.71□□□□□ -0.21
CD40-207ENST00000620709 SLC25A46Q96AG3 418 aa13.71□□□□□ -0.21
CD40-207ENST00000620709 KCNJ15Q99712 375 aa13.71□□□□□ -0.21
CD40-207ENST00000620709 HDHD2Q9H0R4 259 aa13.71□□□□□ -0.21
CD40-207ENST00000620709 G6PC2Q9NQR9 355 aa13.71□□□□□ -0.21
CD40-207ENST00000620709 ZNF275Q9NSD4 429 aaPredicted RBP13.71□□□□□ -0.21
CD40-207ENST00000620709 FAM206AQ9NX38 181 aa13.71□□□□□ -0.21
CD40-207ENST00000620709 TRBV5-5A0A0J9YX44 114 aa13.7□□□□□ -0.22
CD40-207ENST00000620709 SGCEO43556 437 aa13.7□□□□□ -0.22
CD40-207ENST00000620709 CX3CR1P49238 355 aa13.7□□□□□ -0.22
CD40-207ENST00000620709 UCP2P55851 309 aa13.7□□□□□ -0.22
CD40-207ENST00000620709 CCL8P80075 99 aa13.7□□□□□ -0.22
CD40-207ENST00000620709 ECH1Q13011 328 aa13.7□□□□□ -0.22
CD40-207ENST00000620709 LINC00299Q6ZSB3 139 aa13.7□□□□□ -0.22
CD40-207ENST00000620709 OR1J1Q8NGS3 322 aa13.7□□□□□ -0.22
CD40-207ENST00000620709 CLDND2Q8NHS1 167 aa13.7□□□□□ -0.22
CD40-207ENST00000620709 TBC1D15Q8TC07 691 aa13.7□□□□□ -0.22
CD40-207ENST00000620709 C19orf24Q9BVV8 132 aa13.7□□□□□ -0.22
CD40-207ENST00000620709 NXF2Q9GZY0 626 aaKnown RBP13.7□□□□□ -0.22
CD40-207ENST00000620709 MMP27Q9H306 513 aa13.7□□□□□ -0.22
CD40-207ENST00000620709 TREM2Q9NZC2 230 aa13.7□□□□□ -0.22
CD40-207ENST00000620709 TIMM10BQ9Y5J6 103 aa13.7□□□□□ -0.22
CD40-207ENST00000620709 TRAV1-2A0A0B4J238 106 aa13.69□□□□□ -0.22
CD40-207ENST00000620709 DOK2O60496 412 aa13.69□□□□□ -0.22
CD40-207ENST00000620709 APOC1P02654 83 aa13.69□□□□□ -0.22
CD40-207ENST00000620709 OCM2P0CE71 109 aa13.69□□□□□ -0.22
CD40-207ENST00000620709 UBCP0CG48 685 aaKnown RBP13.69□□□□□ -0.22
CD40-207ENST00000620709 ZNF32P17041 273 aa13.69□□□□□ -0.22
CD40-207ENST00000620709 PRKXP51817 358 aa13.69□□□□□ -0.22
CD40-207ENST00000620709 HNRNPA0Q13151 305 aaKnown RBP13.69□□□□□ -0.22
CD40-207ENST00000620709 ODF4Q2M2E3 257 aa13.69□□□□□ -0.22
CD40-207ENST00000620709 HSD17B12Q53GQ0 312 aa13.69□□□□□ -0.22
CD40-207ENST00000620709 SPATA46Q5T0L3 261 aa13.69□□□□□ -0.22
CD40-207ENST00000620709 FAM27D1Q5T7N8 215 aa13.69□□□□□ -0.22
CD40-207ENST00000620709 TMEM244Q5VVB8 128 aa13.69□□□□□ -0.22
CD40-207ENST00000620709 GLCCI1Q86VQ1 547 aa13.69□□□□□ -0.22
CD40-207ENST00000620709 TPRA1Q86W33 373 aa13.69□□□□□ -0.22
CD40-207ENST00000620709 ZNF283Q8N7M2 679 aa13.69□□□□□ -0.22
CD40-207ENST00000620709 CPEB3Q8NE35 698 aaKnown RBP13.69□□□□□ -0.22
CD40-207ENST00000620709 AKR7LQ8NHP1 331 aa13.69□□□□□ -0.22
CD40-207ENST00000620709 TSEN15Q8WW01 171 aaKnown RBP13.69□□□□□ -0.22
CD40-207ENST00000620709 DERL3Q96Q80 235 aa13.69□□□□□ -0.22
CD40-207ENST00000620709 BCL2L14Q9BZR8 327 aa13.69□□□□□ -0.22
CD40-207ENST00000620709 NUFIP1Q9UHK0 495 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms