RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 NXPH2O95156 264 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 CD3DP04234 171 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 OR8U8P0C7N1 319 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 ELAVL1Q15717 326 aaKnown RBP2.76□□□□□ -1.97
LPP-221ENST00000618621 ZNF141Q15928 474 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 TMEM71Q6P5X7 295 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 ADGRE4PQ86SQ3 457 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 DMBX1Q8NFW5 382 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 DMRTA2Q96SC8 542 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 OR51M1Q9H341 326 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 GLRX2Q9NS18 164 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 CTAG2O75638 210 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 SNCAP37840 140 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 KCNJ3P48549 501 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 F2RL1P55085 397 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 OR2B8PP59922 312 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 UBE2MP61081 183 aaKnown RBP2.76□□□□□ -1.97
LPP-221ENST00000618621 IKZF1Q13422 519 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 CLINT1Q14677 625 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 IQCJQ1A5X6 159 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 VWA2Q5GFL6 755 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 CMTM2Q8TAZ6 248 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 FRZBQ92765 325 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 RAB40CQ96S21 281 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 PIMREGQ9BSJ6 248 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 EDEM2Q9BV94 578 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 FN3KRPQ9HA64 309 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 CLDN17P56750 224 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 ODF1Q14990 250 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 BATFQ16520 125 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 TMEM128Q5BJH2 165 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 COL13A1Q5TAT6 717 aaPredicted RBP2.76□□□□□ -1.97
LPP-221ENST00000618621 DMKNQ6E0U4 476 aaPredicted RBP2.76□□□□□ -1.97
LPP-221ENST00000618621 ANKRD33Q7Z3H0 272 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 ATOH1Q92858 354 aaPredicted RBP2.76□□□□□ -1.97
LPP-221ENST00000618621 PTP4A1Q93096 173 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 SIGLEC11Q96RL6 698 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 UTP23Q9BRU9 249 aaKnown RBP2.76□□□□□ -1.97
LPP-221ENST00000618621 TMPRSS13Q9BYE2 586 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 GAR1Q9NY12 217 aaKnown RBP2.76□□□□□ -1.97
LPP-221ENST00000618621 NTMQ9P121 344 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 IL19Q9UHD0 177 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 OSGIN2Q9Y236 505 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 KDM3BQ7LBC6 1761 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 C7orf66A4D0T2 115 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 DUS4LO95620 317 aaKnown RBP2.76□□□□□ -1.97
LPP-221ENST00000618621 CBX7O95931 251 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 WNT1P04628 370 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 CCR5P51681 352 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 UBE2G2P60604 165 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 HYAL4Q2M3T9 481 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 KRTCAP3Q53RY4 240 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 DCAF12Q5T6F0 453 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 SSX9Q7RTT3 188 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 UBE3DQ7Z6J8 389 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 Q8NFD4 153 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 ST8SIA1Q92185 356 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 C10orf35Q96D05 121 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 PIPOXQ9P0Z9 390 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 ABCD4O14678 606 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 FBP1P09467 338 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 ZNF17P17021 662 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 LEMD1Q68G75 181 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 OR2T2Q6IF00 324 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 MRM1Q6IN84 353 aaKnown RBP2.76□□□□□ -1.97
LPP-221ENST00000618621 HSD17B13Q7Z5P4 300 aaPredicted RBP2.76□□□□□ -1.97
LPP-221ENST00000618621 RBMXL3Q8N7X1 1067 aaKnown RBP2.76□□□□□ -1.97
LPP-221ENST00000618621 OTOSQ8NHW6 89 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 RND1Q92730 232 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 ELSPBP1Q96BH3 223 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 PIK3IP1Q96FE7 263 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 NUDT22Q9BRQ3 303 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 FANCMQ8IYD8 2048 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 BHLHE40O14503 412 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 SFT2D2O95562 160 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 CD37P11049 281 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 CPN1P15169 458 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 CSNK1EP49674 416 aaKnown RBP2.76□□□□□ -1.97
LPP-221ENST00000618621 GPM6AP51674 278 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 ZNF77Q15935 545 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 ZNF770Q6IQ21 691 aaPredicted RBP2.76□□□□□ -1.97
LPP-221ENST00000618621 ZNF610Q8N9Z0 462 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 C11orf40Q8WZ69 217 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 CPNE4Q96A23 557 aaPredicted RBP2.76□□□□□ -1.97
LPP-221ENST00000618621 ZNF714Q96N38 554 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 SOSTQ9BQB4 213 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 RPP25Q9BUL9 199 aaKnown RBP2.76□□□□□ -1.97
LPP-221ENST00000618621 AKIRIN1Q9H9L7 192 aaPredicted RBP2.76□□□□□ -1.97
LPP-221ENST00000618621 MMP26Q9NRE1 261 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 GNG12Q9UBI6 72 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 C4AP0C0L4 1744 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 C4BP0C0L5 1744 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 RGPD8O14715 1765 aaPredicted RBP2.76□□□□□ -1.97
LPP-221ENST00000618621 A0A1W2PPH5 198 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 ST8SIA3O43173 380 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 SPINT2O43291 252 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 HRO43593 1189 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 CD46P15529 392 aa2.76□□□□□ -1.97
LPP-221ENST00000618621 SUB1P53999 127 aaKnown RBP eCLIP2.76□□□□□ -1.97
LPP-221ENST00000618621 EIF4EBP2Q13542 120 aaPredicted RBP2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms