RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 SSX2Q16385 188 aa12.23□□□□□ -0.45
CACNA1C-231ENST00000616390 C1QL2Q7Z5L3 287 aa12.23□□□□□ -0.45
CACNA1C-231ENST00000616390 OR5AS1Q8N127 324 aa12.23□□□□□ -0.45
CACNA1C-231ENST00000616390 ARMC10Q8N2F6 343 aa12.23□□□□□ -0.45
CACNA1C-231ENST00000616390 OR4K15Q8NH41 348 aa12.23□□□□□ -0.45
CACNA1C-231ENST00000616390 NAT6Q93015 286 aa12.23□□□□□ -0.45
CACNA1C-231ENST00000616390 RAB3CQ96E17 227 aa12.23□□□□□ -0.45
CACNA1C-231ENST00000616390 PRRT1Q99946 306 aa12.23□□□□□ -0.45
CACNA1C-231ENST00000616390 NUDT16L1Q9BRJ7 211 aaKnown RBP12.23□□□□□ -0.45
CACNA1C-231ENST00000616390 COMMD9Q9P000 198 aa12.23□□□□□ -0.45
CACNA1C-231ENST00000616390 PLATP00750 562 aa12.23□□□□□ -0.45
CACNA1C-231ENST00000616390 RLN2P04090 185 aa12.23□□□□□ -0.45
CACNA1C-231ENST00000616390 NPY4RP50391 375 aa12.23□□□□□ -0.45
CACNA1C-231ENST00000616390 ATP1B3P54709 279 aa12.23□□□□□ -0.45
CACNA1C-231ENST00000616390 PLAC9Q5JTB6 97 aa12.23□□□□□ -0.45
CACNA1C-231ENST00000616390 WDR73Q6P4I2 378 aa12.23□□□□□ -0.45
CACNA1C-231ENST00000616390 BOLLQ8N9W6 283 aaKnown RBP12.23□□□□□ -0.45
CACNA1C-231ENST00000616390 ARHGAP5-AS1Q96IT6 56 aa12.23□□□□□ -0.45
CACNA1C-231ENST00000616390 TMEM59Q9BXS4 323 aa12.23□□□□□ -0.45
CACNA1C-231ENST00000616390 LPAR5Q9H1C0 372 aa12.23□□□□□ -0.45
CACNA1C-231ENST00000616390 PNRC2Q9NPJ4 139 aaKnown RBP12.23□□□□□ -0.45
CACNA1C-231ENST00000616390 HS3ST3B1Q9Y662 390 aa12.23□□□□□ -0.45
CACNA1C-231ENST00000616390 AUP1Q9Y679 476 aa12.23□□□□□ -0.45
CACNA1C-231ENST00000616390 TRBV23-1A0A0A0MS06 115 aa12.22□□□□□ -0.45
CACNA1C-231ENST00000616390 A0A0A6YYH2 397 aa12.22□□□□□ -0.45
CACNA1C-231ENST00000616390 hCG_1807616A0A1W2PRN6 198 aa12.22□□□□□ -0.45
CACNA1C-231ENST00000616390 A6NJ64 397 aa12.22□□□□□ -0.45
CACNA1C-231ENST00000616390 ETV2O00321 342 aaPredicted RBP12.22□□□□□ -0.45
CACNA1C-231ENST00000616390 NMBP08949 121 aa12.22□□□□□ -0.45
CACNA1C-231ENST00000616390 CD37P11049 281 aa12.22□□□□□ -0.45
CACNA1C-231ENST00000616390 FAHP16930 419 aa12.22□□□□□ -0.45
CACNA1C-231ENST00000616390 SERPINA2P20848 420 aa12.22□□□□□ -0.45
CACNA1C-231ENST00000616390 RAB13P51153 203 aa12.22□□□□□ -0.45
CACNA1C-231ENST00000616390 MEF2DQ14814 521 aa12.22□□□□□ -0.45
CACNA1C-231ENST00000616390 HDDC2Q7Z4H3 204 aa12.22□□□□□ -0.45
CACNA1C-231ENST00000616390 DTX1Q86Y01 620 aa12.22□□□□□ -0.45
CACNA1C-231ENST00000616390 RNF138Q8WVD3 245 aa12.22□□□□□ -0.45
CACNA1C-231ENST00000616390 PIGTQ969N2 578 aa12.22□□□□□ -0.45
CACNA1C-231ENST00000616390 CDX2Q99626 313 aaPredicted RBP12.22□□□□□ -0.45
CACNA1C-231ENST00000616390 ALX4Q9H161 411 aaPredicted RBP12.22□□□□□ -0.45
CACNA1C-231ENST00000616390 HDGFL3Q9Y3E1 203 aa12.22□□□□□ -0.45
CACNA1C-231ENST00000616390 IGLV3-32A0A0A0MS00 114 aa12.22□□□□□ -0.45
CACNA1C-231ENST00000616390 C5orf51A6NDU8 294 aa12.22□□□□□ -0.45
CACNA1C-231ENST00000616390 RFPL4AA6NLU0 287 aa12.22□□□□□ -0.45
CACNA1C-231ENST00000616390 RFPL4AL1F8VTS6 287 aa12.22□□□□□ -0.45
CACNA1C-231ENST00000616390 SDCBPO00560 298 aaPredicted RBP12.22□□□□□ -0.45
CACNA1C-231ENST00000616390 ZNF273Q14593 569 aa12.22□□□□□ -0.45
CACNA1C-231ENST00000616390 KRTCAP3Q53RY4 240 aa12.22□□□□□ -0.45
CACNA1C-231ENST00000616390 YRDCQ86U90 279 aaKnown RBP12.22□□□□□ -0.45
CACNA1C-231ENST00000616390 FADS6Q8N9I5 356 aa12.22□□□□□ -0.45
CACNA1C-231ENST00000616390 OR51T1Q8NGJ9 327 aa12.22□□□□□ -0.45
CACNA1C-231ENST00000616390 CA5BP1Q8WTZ4 195 aa12.22□□□□□ -0.45
CACNA1C-231ENST00000616390 PPP1R1CQ8WVI7 109 aa12.22□□□□□ -0.45
CACNA1C-231ENST00000616390 LINC00052Q96N35 136 aa12.22□□□□□ -0.45
CACNA1C-231ENST00000616390 IGKV1-9A0A0C4DH69 117 aa12.21□□□□□ -0.45
CACNA1C-231ENST00000616390 PQLC2LA1A4F0 135 aa12.21□□□□□ -0.45
CACNA1C-231ENST00000616390 C9J4A7 227 aa12.21□□□□□ -0.45
CACNA1C-231ENST00000616390 D6RAR5 112 aa12.21□□□□□ -0.45
CACNA1C-231ENST00000616390 CDC14BO60729 498 aa12.21□□□□□ -0.45
CACNA1C-231ENST00000616390 PATE4P0C8F1 98 aa12.21□□□□□ -0.45
CACNA1C-231ENST00000616390 COX6A1P12074 109 aa12.21□□□□□ -0.45
CACNA1C-231ENST00000616390 OTX2P32243 289 aa12.21□□□□□ -0.45
CACNA1C-231ENST00000616390 ZNF660Q6AZW8 331 aaPredicted RBP12.21□□□□□ -0.45
CACNA1C-231ENST00000616390 AGBL5Q8NDL9 886 aa12.21□□□□□ -0.45
CACNA1C-231ENST00000616390 SLC25A43Q8WUT9 341 aaPredicted RBP12.21□□□□□ -0.45
CACNA1C-231ENST00000616390 PTX4Q96A99 478 aa12.21□□□□□ -0.45
CACNA1C-231ENST00000616390 NEU1Q99519 415 aa12.21□□□□□ -0.45
CACNA1C-231ENST00000616390 SLC26A1Q9H2B4 701 aa12.21□□□□□ -0.45
CACNA1C-231ENST00000616390 PLEK2Q9NYT0 353 aa12.21□□□□□ -0.45
CACNA1C-231ENST00000616390 DOCK7Q96N67 2140 aa12.21□□□□□ -0.45
CACNA1C-231ENST00000616390 NSG1A0A0A6YYJ2 146 aa12.21□□□□□ -0.46
CACNA1C-231ENST00000616390 C9orf170A2RU37 121 aa12.21□□□□□ -0.46
CACNA1C-231ENST00000616390 TMEM14DPA8MWL7 114 aa12.21□□□□□ -0.46
CACNA1C-231ENST00000616390 RAD51DO75771 328 aa12.21□□□□□ -0.46
CACNA1C-231ENST00000616390 KLF7O75840 302 aaPredicted RBP12.21□□□□□ -0.46
CACNA1C-231ENST00000616390 DKK1O94907 266 aa12.21□□□□□ -0.46
CACNA1C-231ENST00000616390 SSR4P51571 173 aa12.21□□□□□ -0.46
CACNA1C-231ENST00000616390 TMEM50BP56557 158 aa12.21□□□□□ -0.46
CACNA1C-231ENST00000616390 MICBQ29980 383 aa12.21□□□□□ -0.46
CACNA1C-231ENST00000616390 OPN5Q6U736 354 aa12.21□□□□□ -0.46
CACNA1C-231ENST00000616390 GALNTL5Q7Z4T8 443 aa12.21□□□□□ -0.46
CACNA1C-231ENST00000616390 LYG2Q86SG7 212 aa12.21□□□□□ -0.46
CACNA1C-231ENST00000616390 RPS19BP1Q86WX3 136 aaKnown RBP12.21□□□□□ -0.46
CACNA1C-231ENST00000616390 OR5M8Q8NGP6 311 aa12.21□□□□□ -0.46
CACNA1C-231ENST00000616390 SCARB1Q8WTV0 552 aa12.21□□□□□ -0.46
CACNA1C-231ENST00000616390 NCKAP5O14513 1909 aa12.21□□□□□ -0.46
CACNA1C-231ENST00000616390 GPR179Q6PRD1 2367 aa12.2□□□□□ -0.46
CACNA1C-231ENST00000616390 SIGLEC5O15389 551 aa12.2□□□□□ -0.46
CACNA1C-231ENST00000616390 CASRP41180 1078 aa12.2□□□□□ -0.46
CACNA1C-231ENST00000616390 SIGLEC14Q08ET2 396 aa12.2□□□□□ -0.46
CACNA1C-231ENST00000616390 SLC9A3R2Q15599 337 aa12.2□□□□□ -0.46
CACNA1C-231ENST00000616390 TRIM61Q5EBN2 209 aa12.2□□□□□ -0.46
CACNA1C-231ENST00000616390 LYZL4Q96KX0 146 aa12.2□□□□□ -0.46
CACNA1C-231ENST00000616390 ZNF75AQ96N20 296 aa12.2□□□□□ -0.46
CACNA1C-231ENST00000616390 FN3KRPQ9HA64 309 aa12.2□□□□□ -0.46
CACNA1C-231ENST00000616390 CHMP1AQ9HD42 196 aaPredicted RBP12.2□□□□□ -0.46
CACNA1C-231ENST00000616390 KIF25Q9UIL4 384 aa12.2□□□□□ -0.46
CACNA1C-231ENST00000616390 A0A0G2JMM0 328 aa12.2□□□□□ -0.46
CACNA1C-231ENST00000616390 A0A1W2PPB8 328 aa12.2□□□□□ -0.46
CACNA1C-231ENST00000616390 A0A1W2PRS3 328 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms