RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 MICU1Q9BPX6 476 aa12.52□□□□□ -0.4
CD48-203ENST00000613788 ADAT1Q9BUB4 502 aaKnown RBP12.52□□□□□ -0.4
CD48-203ENST00000613788 FUNDC2Q9BWH2 189 aa12.52□□□□□ -0.4
CD48-203ENST00000613788 SLITRK2Q9H156 845 aa12.52□□□□□ -0.4
CD48-203ENST00000613788 OR51E2Q9H255 320 aa12.52□□□□□ -0.4
CD48-203ENST00000613788 GPR173Q9NS66 373 aa12.52□□□□□ -0.4
CD48-203ENST00000613788 NKIRAS2Q9NYR9 191 aa12.52□□□□□ -0.4
CD48-203ENST00000613788 FOXJ3Q9UPW0 622 aa12.52□□□□□ -0.4
CD48-203ENST00000613788 PLCE1Q9P212 2302 aa12.52□□□□□ -0.4
CD48-203ENST00000613788 AIREO43918 545 aa12.52□□□□□ -0.41
CD48-203ENST00000613788 GPX5O75715 221 aa12.52□□□□□ -0.41
CD48-203ENST00000613788 ALX3O95076 343 aa12.52□□□□□ -0.41
CD48-203ENST00000613788 ERCC1P07992 297 aaPredicted RBP12.52□□□□□ -0.41
CD48-203ENST00000613788 ATF1P18846 271 aa12.52□□□□□ -0.41
CD48-203ENST00000613788 FSTP19883 344 aa12.52□□□□□ -0.41
CD48-203ENST00000613788 RAB3AP20336 220 aa12.52□□□□□ -0.41
CD48-203ENST00000613788 BLMHQ13867 455 aa12.52□□□□□ -0.41
CD48-203ENST00000613788 UBE2V2Q15819 145 aa12.52□□□□□ -0.41
CD48-203ENST00000613788 PCGF3Q3KNV8 242 aa12.52□□□□□ -0.41
CD48-203ENST00000613788 FAM209AQ5JX71 171 aa12.52□□□□□ -0.41
CD48-203ENST00000613788 OR5A2Q8NGI9 324 aa12.52□□□□□ -0.41
CD48-203ENST00000613788 OR13C9Q8NGT0 318 aa12.52□□□□□ -0.41
CD48-203ENST00000613788 UBASH3BQ8TF42 649 aa12.52□□□□□ -0.41
CD48-203ENST00000613788 ELMOD3Q96FG2 381 aa12.52□□□□□ -0.41
CD48-203ENST00000613788 VRK1Q99986 396 aaPredicted RBP12.52□□□□□ -0.41
CD48-203ENST00000613788 CHCHD6Q9BRQ6 235 aa12.52□□□□□ -0.41
CD48-203ENST00000613788 RTL8AQ9BWD3 113 aa12.52□□□□□ -0.41
CD48-203ENST00000613788 RAB1BQ9H0U4 201 aa12.52□□□□□ -0.41
CD48-203ENST00000613788 TCF7L1Q9HCS4 588 aa12.52□□□□□ -0.41
CD48-203ENST00000613788 C14orf119Q9NWQ9 140 aa12.52□□□□□ -0.41
CD48-203ENST00000613788 TXNL4BQ9NX01 149 aaKnown RBP12.52□□□□□ -0.41
CD48-203ENST00000613788 TAS2R4Q9NYW5 299 aa12.52□□□□□ -0.41
CD48-203ENST00000613788 ROS1P08922 2347 aa12.51□□□□□ -0.41
CD48-203ENST00000613788 LOC100506127A0A0U1RQW1 187 aa12.51□□□□□ -0.41
CD48-203ENST00000613788 H0YL77 283 aa12.51□□□□□ -0.41
CD48-203ENST00000613788 PIN1P1O15428 100 aa12.51□□□□□ -0.41
CD48-203ENST00000613788 MAGEB3O15480 346 aa12.51□□□□□ -0.41
CD48-203ENST00000613788 MLNRO43193 412 aa12.51□□□□□ -0.41
CD48-203ENST00000613788 SULT1B1O43704 296 aa12.51□□□□□ -0.41
CD48-203ENST00000613788 IGHV1-46P01743 117 aa12.51□□□□□ -0.41
CD48-203ENST00000613788 SRMP19623 302 aa12.51□□□□□ -0.41
CD48-203ENST00000613788 PRKACBP22694 351 aa12.51□□□□□ -0.41
CD48-203ENST00000613788 FUT6P51993 359 aa12.51□□□□□ -0.41
CD48-203ENST00000613788 CEP78Q5JTW2 689 aa12.51□□□□□ -0.41
CD48-203ENST00000613788 FAM27D1Q5T7N8 215 aa12.51□□□□□ -0.41
CD48-203ENST00000613788 GPR107Q5VW38 600 aa12.51□□□□□ -0.41
CD48-203ENST00000613788 C22orf42Q6IC83 251 aa12.51□□□□□ -0.41
CD48-203ENST00000613788 SATL1Q86VE3 508 aa12.51□□□□□ -0.41
CD48-203ENST00000613788 ANKRD13BQ86YJ7 626 aa12.51□□□□□ -0.41
CD48-203ENST00000613788 OR1M1Q8NGA1 313 aa12.51□□□□□ -0.41
CD48-203ENST00000613788 OR10AD1Q8NGE0 317 aa12.51□□□□□ -0.41
CD48-203ENST00000613788 OR5P3Q8WZ94 311 aa12.51□□□□□ -0.41
CD48-203ENST00000613788 GTF3AQ92664 365 aaKnown RBP12.51□□□□□ -0.41
CD48-203ENST00000613788 SPSB1Q96BD6 273 aa12.51□□□□□ -0.41
CD48-203ENST00000613788 ITPKCQ96DU7 683 aa12.51□□□□□ -0.41
CD48-203ENST00000613788 RNF170Q96K19 258 aa12.51□□□□□ -0.41
CD48-203ENST00000613788 CCL19Q99731 98 aa12.51□□□□□ -0.41
CD48-203ENST00000613788 CACNG6Q9BXT2 260 aa12.51□□□□□ -0.41
CD48-203ENST00000613788 EGLN1Q9GZT9 426 aa12.51□□□□□ -0.41
CD48-203ENST00000613788 CXXC4Q9H2H0 198 aa12.51□□□□□ -0.41
CD48-203ENST00000613788 CXorf56Q9H5V9 222 aa12.51□□□□□ -0.41
CD48-203ENST00000613788 PPP1R3EQ9H7J1 279 aa12.51□□□□□ -0.41
CD48-203ENST00000613788 IL19Q9UHD0 177 aa12.51□□□□□ -0.41
CD48-203ENST00000613788 MEGF11A6BM72 1044 aa12.5□□□□□ -0.41
CD48-203ENST00000613788 OR5B21A6NL26 309 aa12.5□□□□□ -0.41
CD48-203ENST00000613788 H7C417 338 aa12.5□□□□□ -0.41
CD48-203ENST00000613788 IGFBP3P17936 291 aaPredicted RBP12.5□□□□□ -0.41
CD48-203ENST00000613788 CALRP27797 417 aaKnown RBP12.5□□□□□ -0.41
CD48-203ENST00000613788 SRP9P49458 86 aaKnown RBP12.5□□□□□ -0.41
CD48-203ENST00000613788 GNG3P63215 75 aa12.5□□□□□ -0.41
CD48-203ENST00000613788 TNFAIP6P98066 277 aaPredicted RBP12.5□□□□□ -0.41
CD48-203ENST00000613788 ZNF529Q6P280 563 aa12.5□□□□□ -0.41
CD48-203ENST00000613788 ZCCHC24Q8N2G6 241 aaKnown RBP12.5□□□□□ -0.41
CD48-203ENST00000613788 CELF2-AS1Q8N7Q2 184 aa12.5□□□□□ -0.41
CD48-203ENST00000613788 DNAAF1Q8NEP3 725 aa12.5□□□□□ -0.41
CD48-203ENST00000613788 ORAI1Q96D31 301 aa12.5□□□□□ -0.41
CD48-203ENST00000613788 TMEM138Q9NPI0 162 aa12.5□□□□□ -0.41
CD48-203ENST00000613788 SNTG1Q9NSN8 517 aa12.5□□□□□ -0.41
CD48-203ENST00000613788 DECR2Q9NUI1 292 aa12.5□□□□□ -0.41
CD48-203ENST00000613788 DCHS2Q6V1P9 2916 aa12.5□□□□□ -0.41
CD48-203ENST00000613788 TRAV8-7A0A075B6U6 113 aa12.49□□□□□ -0.41
CD48-203ENST00000613788 IGKV1-9A0A0C4DH69 117 aa12.49□□□□□ -0.41
CD48-203ENST00000613788 F5H5P2 479 aa12.49□□□□□ -0.41
CD48-203ENST00000613788 TPD52L2O43399 206 aaKnown RBP12.49□□□□□ -0.41
CD48-203ENST00000613788 ALDOBP05062 364 aa12.49□□□□□ -0.41
CD48-203ENST00000613788 CD55P08174 381 aa12.49□□□□□ -0.41
CD48-203ENST00000613788 PRF1P14222 555 aa12.49□□□□□ -0.41
CD48-203ENST00000613788 MYL9P24844 172 aa12.49□□□□□ -0.41
CD48-203ENST00000613788 AZGP1P25311 298 aaKnown RBP12.49□□□□□ -0.41
CD48-203ENST00000613788 BDKRB2P30411 391 aa12.49□□□□□ -0.41
CD48-203ENST00000613788 CD200P41217 278 aa12.49□□□□□ -0.41
CD48-203ENST00000613788 ASPHD2Q6ICH7 369 aa12.49□□□□□ -0.41
CD48-203ENST00000613788 HPSE2Q8WWQ2 592 aa12.49□□□□□ -0.41
CD48-203ENST00000613788 IGFBPL1Q8WX77 278 aa12.49□□□□□ -0.41
CD48-203ENST00000613788 RPL3LQ92901 407 aaKnown RBP12.49□□□□□ -0.41
CD48-203ENST00000613788 DVL3Q92997 716 aaPredicted RBP12.49□□□□□ -0.41
CD48-203ENST00000613788 BORCS8Q96FH0 119 aa12.49□□□□□ -0.41
CD48-203ENST00000613788 CPNE2Q96FN4 548 aaPredicted RBP12.49□□□□□ -0.41
CD48-203ENST00000613788 TRMT61AQ96FX7 289 aaKnown RBP12.49□□□□□ -0.41
CD48-203ENST00000613788 KCTD7Q96MP8 289 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms