RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 RTL8AQ9BWD3 113 aa13.97□□□□□ -0.17
PNKP-210ENST00000597965 PAPOLGQ9BWT3 736 aaKnown RBP13.97□□□□□ -0.17
PNKP-210ENST00000597965 TLNRD1Q9H1K6 362 aa13.97□□□□□ -0.17
PNKP-210ENST00000597965 OR10A2Q9H208 303 aa13.97□□□□□ -0.17
PNKP-210ENST00000597965 DCLRE1BQ9H816 532 aa13.97□□□□□ -0.17
PNKP-210ENST00000597965 SIRT7Q9NRC8 400 aa13.97□□□□□ -0.17
PNKP-210ENST00000597965 HAO2Q9NYQ3 351 aa13.97□□□□□ -0.17
PNKP-210ENST00000597965 MPC1Q9Y5U8 109 aa13.97□□□□□ -0.17
PNKP-210ENST00000597965 DHRS12A0PJE2 317 aa13.96□□□□□ -0.17
PNKP-210ENST00000597965 MEIOCA2RUB1 952 aa13.96□□□□□ -0.17
PNKP-210ENST00000597965 M0R1W7 72 aa13.96□□□□□ -0.17
PNKP-210ENST00000597965 FCN3O75636 299 aa13.96□□□□□ -0.17
PNKP-210ENST00000597965 TSPAN15O95858 294 aa13.96□□□□□ -0.17
PNKP-210ENST00000597965 TGM4P49221 684 aa13.96□□□□□ -0.17
PNKP-210ENST00000597965 MS4A2Q01362 244 aa13.96□□□□□ -0.17
PNKP-210ENST00000597965 EGR3Q06889 387 aa13.96□□□□□ -0.17
PNKP-210ENST00000597965 IKZF1Q13422 519 aa13.96□□□□□ -0.17
PNKP-210ENST00000597965 SPATS1Q496A3 300 aa13.96□□□□□ -0.17
PNKP-210ENST00000597965 FAM216BQ8N7L0 139 aa13.96□□□□□ -0.17
PNKP-210ENST00000597965 OR2T33Q8NG76 320 aa13.96□□□□□ -0.17
PNKP-210ENST00000597965 H1FXQ92522 213 aaKnown RBP13.96□□□□□ -0.17
PNKP-210ENST00000597965 RAB18Q9NP72 206 aa13.96□□□□□ -0.17
PNKP-210ENST00000597965 TET2Q6N021 2002 aaPredicted RBP13.96□□□□□ -0.17
PNKP-210ENST00000597965 hCG_38984A0A1B0GV85 526 aa13.95□□□□□ -0.18
PNKP-210ENST00000597965 RIIAD1A6NNX1 92 aa13.95□□□□□ -0.18
PNKP-210ENST00000597965 TNFRSF11BO00300 401 aa13.95□□□□□ -0.18
PNKP-210ENST00000597965 ACOT8O14734 319 aa13.95□□□□□ -0.18
PNKP-210ENST00000597965 CDIPTO14735 213 aa13.95□□□□□ -0.18
PNKP-210ENST00000597965 ZNF3P17036 446 aa13.95□□□□□ -0.18
PNKP-210ENST00000597965 SPI1P17947 270 aa13.95□□□□□ -0.18
PNKP-210ENST00000597965 GABRA5P31644 462 aa13.95□□□□□ -0.18
PNKP-210ENST00000597965 SAA4P35542 130 aa13.95□□□□□ -0.18
PNKP-210ENST00000597965 GSK3AP49840 483 aa13.95□□□□□ -0.18
PNKP-210ENST00000597965 EIF2B1Q14232 305 aaKnown RBP13.95□□□□□ -0.18
PNKP-210ENST00000597965 HERPUD1Q15011 391 aa13.95□□□□□ -0.18
PNKP-210ENST00000597965 STUMQ69YW2 141 aa13.95□□□□□ -0.18
PNKP-210ENST00000597965 SHFQ7M4L6 423 aa13.95□□□□□ -0.18
PNKP-210ENST00000597965 OR5D13Q8NGL4 314 aa13.95□□□□□ -0.18
PNKP-210ENST00000597965 SGK3Q96BR1 496 aa13.95□□□□□ -0.18
PNKP-210ENST00000597965 CCDC124Q96CT7 223 aaKnown RBP13.95□□□□□ -0.18
PNKP-210ENST00000597965 SLC25A10Q9UBX3 287 aaPredicted RBP13.95□□□□□ -0.18
PNKP-210ENST00000597965 ZNF391Q9UJN7 358 aa13.95□□□□□ -0.18
PNKP-210ENST00000597965 SF3B6Q9Y3B4 125 aaKnown RBP13.95□□□□□ -0.18
PNKP-210ENST00000597965 PRKDCP78527 4128 aaKnown RBP13.95□□□□□ -0.18
PNKP-210ENST00000597965 A0A1W2PQ09 198 aa13.94□□□□□ -0.18
PNKP-210ENST00000597965 FKBP6O75344 327 aa13.94□□□□□ -0.18
PNKP-210ENST00000597965 CCNB2O95067 398 aa13.94□□□□□ -0.18
PNKP-210ENST00000597965 CAV3P56539 151 aa13.94□□□□□ -0.18
PNKP-210ENST00000597965 CSNK2BP67870 215 aa13.94□□□□□ -0.18
PNKP-210ENST00000597965 CRMP1Q14194 572 aa13.94□□□□□ -0.18
PNKP-210ENST00000597965 FBLN7Q53RD9 439 aa13.94□□□□□ -0.18
PNKP-210ENST00000597965 SLC35E4Q6ICL7 350 aa13.94□□□□□ -0.18
PNKP-210ENST00000597965 LYPD4Q6UWN0 246 aa13.94□□□□□ -0.18
PNKP-210ENST00000597965 FAM57BQ71RH2 274 aa13.94□□□□□ -0.18
PNKP-210ENST00000597965 REC114Q7Z4M0 266 aa13.94□□□□□ -0.18
PNKP-210ENST00000597965 WDR86Q86TI4 376 aa13.94□□□□□ -0.18
PNKP-210ENST00000597965 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.94□□□□□ -0.18
PNKP-210ENST00000597965 ZNF511Q8NB15 262 aa13.94□□□□□ -0.18
PNKP-210ENST00000597965 BEND2Q8NDZ0 799 aa13.94□□□□□ -0.18
PNKP-210ENST00000597965 RNF133Q8WVZ7 376 aa13.94□□□□□ -0.18
PNKP-210ENST00000597965 ZNRF4Q8WWF5 429 aa13.94□□□□□ -0.18
PNKP-210ENST00000597965 ITFG2Q969R8 447 aa13.94□□□□□ -0.18
PNKP-210ENST00000597965 ITPKCQ96DU7 683 aa13.94□□□□□ -0.18
PNKP-210ENST00000597965 HIST1H2AAQ96QV6 131 aa13.94□□□□□ -0.18
PNKP-210ENST00000597965 INTS14Q96SY0 518 aa13.94□□□□□ -0.18
PNKP-210ENST00000597965 TSSK6Q9BXA6 273 aa13.94□□□□□ -0.18
PNKP-210ENST00000597965 NMNAT2Q9BZQ4 307 aa13.94□□□□□ -0.18
PNKP-210ENST00000597965 PPA2Q9H2U2 334 aa13.94□□□□□ -0.18
PNKP-210ENST00000597965 ZNF281Q9Y2X9 895 aa13.94□□□□□ -0.18
PNKP-210ENST00000597965 LYVE1Q9Y5Y7 322 aa13.94□□□□□ -0.18
PNKP-210ENST00000597965 CMYA5Q8N3K9 4069 aa13.93□□□□□ -0.18
PNKP-210ENST00000597965 A0A1W2PPH5 198 aa13.93□□□□□ -0.18
PNKP-210ENST00000597965 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.93□□□□□ -0.18
PNKP-210ENST00000597965 ARPC2O15144 300 aa13.93□□□□□ -0.18
PNKP-210ENST00000597965 GYPBP06028 91 aa13.93□□□□□ -0.18
PNKP-210ENST00000597965 POU1F1P28069 291 aa13.93□□□□□ -0.18
PNKP-210ENST00000597965 MSX2P35548 267 aaPredicted RBP13.93□□□□□ -0.18
PNKP-210ENST00000597965 ZNF121P58317 390 aaPredicted RBP13.93□□□□□ -0.18
PNKP-210ENST00000597965 TRIM25Q14258 630 aaKnown RBP13.93□□□□□ -0.18
PNKP-210ENST00000597965 C1QL4Q86Z23 238 aa13.93□□□□□ -0.18
PNKP-210ENST00000597965 Q8N7P7 452 aa13.93□□□□□ -0.18
PNKP-210ENST00000597965 OR9Q2Q8NGE9 314 aa13.93□□□□□ -0.18
PNKP-210ENST00000597965 OR4C13Q8NGP0 309 aa13.93□□□□□ -0.18
PNKP-210ENST00000597965 STMN2Q93045 179 aa13.93□□□□□ -0.18
PNKP-210ENST00000597965 PGAM5Q96HS1 289 aa13.93□□□□□ -0.18
PNKP-210ENST00000597965 ABHD6Q9BV23 337 aa13.93□□□□□ -0.18
PNKP-210ENST00000597965 SEMA6AQ9H2E6 1030 aa13.93□□□□□ -0.18
PNKP-210ENST00000597965 RANBP3Q9H6Z4 567 aaPredicted RBP13.93□□□□□ -0.18
PNKP-210ENST00000597965 S100A14Q9HCY8 104 aa13.93□□□□□ -0.18
PNKP-210ENST00000597965 RHBDD3Q9Y3P4 386 aa13.93□□□□□ -0.18
PNKP-210ENST00000597965 TRBV23-1A0A0A0MS06 115 aa13.92□□□□□ -0.18
PNKP-210ENST00000597965 A0A1B0GW55 424 aa13.92□□□□□ -0.18
PNKP-210ENST00000597965 CST4P01036 141 aa13.92□□□□□ -0.18
PNKP-210ENST00000597965 GASTP01350 101 aa13.92□□□□□ -0.18
PNKP-210ENST00000597965 OPN1MWP04001 364 aa13.92□□□□□ -0.18
PNKP-210ENST00000597965 H2BFMP0C1H6 154 aa13.92□□□□□ -0.18
PNKP-210ENST00000597965 DUX4L2P0CJ85 424 aa13.92□□□□□ -0.18
PNKP-210ENST00000597965 DUX4L3P0CJ86 424 aa13.92□□□□□ -0.18
PNKP-210ENST00000597965 DUX4L4P0CJ87 422 aa13.92□□□□□ -0.18
PNKP-210ENST00000597965 DUX4L5P0CJ88 424 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms