RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 RHBDD3Q9Y3P4 386 aa8.11□□□□□ -1.11
LIG1-209ENST00000596104 CDH10Q9Y6N8 788 aa8.11□□□□□ -1.11
LIG1-209ENST00000596104 V9GYQ6 96 aa8.11□□□□□ -1.11
LIG1-209ENST00000596104 TET2Q6N021 2002 aaPredicted RBP8.1□□□□□ -1.11
LIG1-209ENST00000596104 NKX6-3A6NJ46 265 aa8.1□□□□□ -1.11
LIG1-209ENST00000596104 ZNF593O00488 134 aaPredicted RBP8.1□□□□□ -1.11
LIG1-209ENST00000596104 CHST1O43916 411 aa8.1□□□□□ -1.11
LIG1-209ENST00000596104 ANXA2P07355 339 aaKnown RBP8.1□□□□□ -1.11
LIG1-209ENST00000596104 CFL1P23528 166 aaKnown RBP8.1□□□□□ -1.11
LIG1-209ENST00000596104 PAX6P26367 422 aa8.1□□□□□ -1.11
LIG1-209ENST00000596104 RRM2P31350 389 aa8.1□□□□□ -1.11
LIG1-209ENST00000596104 FMO3P31513 532 aa8.1□□□□□ -1.11
LIG1-209ENST00000596104 DCTDP32321 178 aa8.1□□□□□ -1.11
LIG1-209ENST00000596104 IFNGR2P38484 337 aa8.1□□□□□ -1.11
LIG1-209ENST00000596104 SLC25A1P53007 311 aa8.1□□□□□ -1.11
LIG1-209ENST00000596104 GMFBP60983 142 aa8.1□□□□□ -1.11
LIG1-209ENST00000596104 GRB2P62993 217 aaKnown RBP8.1□□□□□ -1.11
LIG1-209ENST00000596104 IL5RAQ01344 420 aa8.1□□□□□ -1.11
LIG1-209ENST00000596104 CRMP1Q14194 572 aa8.1□□□□□ -1.11
LIG1-209ENST00000596104 LRRC75BQ2VPJ9 315 aa8.1□□□□□ -1.11
LIG1-209ENST00000596104 FAM76BQ5HYJ3 339 aa8.1□□□□□ -1.11
LIG1-209ENST00000596104 FAM57BQ71RH2 274 aa8.1□□□□□ -1.11
LIG1-209ENST00000596104 HDXQ7Z353 690 aa8.1□□□□□ -1.11
LIG1-209ENST00000596104 LYG1Q8N1E2 194 aa8.1□□□□□ -1.11
LIG1-209ENST00000596104 CSNK2A3Q8NEV1 391 aa8.1□□□□□ -1.11
LIG1-209ENST00000596104 PIFOQ8TCI5 191 aa8.1□□□□□ -1.11
LIG1-209ENST00000596104 RPL3LQ92901 407 aaKnown RBP8.1□□□□□ -1.11
LIG1-209ENST00000596104 MED30Q96HR3 178 aa8.1□□□□□ -1.11
LIG1-209ENST00000596104 MICU1Q9BPX6 476 aa8.1□□□□□ -1.11
LIG1-209ENST00000596104 FAM234AQ9H0X4 552 aa8.1□□□□□ -1.11
LIG1-209ENST00000596104 ELL3Q9HB65 397 aaPredicted RBP8.1□□□□□ -1.11
LIG1-209ENST00000596104 IL20Q9NYY1 176 aa8.1□□□□□ -1.11
LIG1-209ENST00000596104 A0A1W2PQ09 198 aa8.09□□□□□ -1.11
LIG1-209ENST00000596104 TMEM210A6NLX4 147 aa8.09□□□□□ -1.11
LIG1-209ENST00000596104 ANXA2P2A6NMY6 339 aa8.09□□□□□ -1.11
LIG1-209ENST00000596104 ADARB2-AS1A8MUL3 147 aa8.09□□□□□ -1.11
LIG1-209ENST00000596104 AKR7A2O43488 359 aa8.09□□□□□ -1.11
LIG1-209ENST00000596104 ANGPTL7O43827 346 aa8.09□□□□□ -1.11
LIG1-209ENST00000596104 XPNPEP2O43895 674 aa8.09□□□□□ -1.11
LIG1-209ENST00000596104 SASH3O75995 380 aa8.09□□□□□ -1.11
LIG1-209ENST00000596104 GYPBP06028 91 aa8.09□□□□□ -1.11
LIG1-209ENST00000596104 ACAA1P09110 424 aaPredicted RBP8.09□□□□□ -1.11
LIG1-209ENST00000596104 VSIG10L2P0DP72 767 aa8.09□□□□□ -1.11
LIG1-209ENST00000596104 CLUP10909 449 aa8.09□□□□□ -1.11
LIG1-209ENST00000596104 NDUFB7P17568 137 aa8.09□□□□□ -1.11
LIG1-209ENST00000596104 SPI1P17947 270 aa8.09□□□□□ -1.11
LIG1-209ENST00000596104 ACKR3P25106 362 aa8.09□□□□□ -1.11
LIG1-209ENST00000596104 GNALP38405 381 aa8.09□□□□□ -1.11
LIG1-209ENST00000596104 SLC15A1P46059 708 aa8.09□□□□□ -1.11
LIG1-209ENST00000596104 ZNF121P58317 390 aaPredicted RBP8.09□□□□□ -1.11
LIG1-209ENST00000596104 BLMHQ13867 455 aa8.09□□□□□ -1.11
LIG1-209ENST00000596104 LINC01590Q5TEZ4 76 aa8.09□□□□□ -1.11
LIG1-209ENST00000596104 RPL13AP3Q6NVV1 102 aa8.09□□□□□ -1.11
LIG1-209ENST00000596104 RNF148Q8N7C7 305 aa8.09□□□□□ -1.11
LIG1-209ENST00000596104 OR9Q2Q8NGE9 314 aa8.09□□□□□ -1.11
LIG1-209ENST00000596104 OR52L1Q8NGH7 329 aa8.09□□□□□ -1.11
LIG1-209ENST00000596104 OR52H1Q8NGJ2 320 aa8.09□□□□□ -1.11
LIG1-209ENST00000596104 OR5D13Q8NGL4 314 aa8.09□□□□□ -1.11
LIG1-209ENST00000596104 WIPF2Q8TF74 440 aaPredicted RBP8.09□□□□□ -1.11
LIG1-209ENST00000596104 RNF133Q8WVZ7 376 aa8.09□□□□□ -1.11
LIG1-209ENST00000596104 HPSE2Q8WWQ2 592 aa8.09□□□□□ -1.11
LIG1-209ENST00000596104 OR5P3Q8WZ94 311 aa8.09□□□□□ -1.11
LIG1-209ENST00000596104 PHF21AQ96BD5 680 aa8.09□□□□□ -1.11
LIG1-209ENST00000596104 CLPTM1LQ96KA5 538 aa8.09□□□□□ -1.11
LIG1-209ENST00000596104 AMELYQ99218 206 aa8.09□□□□□ -1.11
LIG1-209ENST00000596104 BTBD10Q9BSF8 475 aa8.09□□□□□ -1.11
LIG1-209ENST00000596104 ABHD6Q9BV23 337 aa8.09□□□□□ -1.11
LIG1-209ENST00000596104 RTL8AQ9BWD3 113 aa8.09□□□□□ -1.11
LIG1-209ENST00000596104 NPFFR1Q9GZQ6 430 aa8.09□□□□□ -1.11
LIG1-209ENST00000596104 MMP28Q9H239 520 aa8.09□□□□□ -1.11
LIG1-209ENST00000596104 ZNF702PQ9H963 129 aa8.09□□□□□ -1.11
LIG1-209ENST00000596104 RAB18Q9NP72 206 aa8.09□□□□□ -1.11
LIG1-209ENST00000596104 SPAG4Q9NPE6 437 aa8.09□□□□□ -1.11
LIG1-209ENST00000596104 SERTAD4Q9NUC0 356 aa8.09□□□□□ -1.11
LIG1-209ENST00000596104 NLKQ9UBE8 527 aa8.09□□□□□ -1.11
LIG1-209ENST00000596104 ZNF222Q9UK12 451 aa8.09□□□□□ -1.11
LIG1-209ENST00000596104 MPC1Q9Y5U8 109 aa8.09□□□□□ -1.11
LIG1-209ENST00000596104 PLXNB1O43157 2135 aa8.08□□□□□ -1.12
LIG1-209ENST00000596104 IGKV1D-17A0A075B6S4 117 aa8.08□□□□□ -1.12
LIG1-209ENST00000596104 TRBV23-1A0A0A0MS06 115 aa8.08□□□□□ -1.12
LIG1-209ENST00000596104 OR2AT4A6NND4 320 aa8.08□□□□□ -1.12
LIG1-209ENST00000596104 ZNF850A8MQ14 1090 aa8.08□□□□□ -1.12
LIG1-209ENST00000596104 H0YAE9 185 aa8.08□□□□□ -1.12
LIG1-209ENST00000596104 CCDC22O60826 627 aa8.08□□□□□ -1.12
LIG1-209ENST00000596104 FBXO24O75426 580 aa8.08□□□□□ -1.12
LIG1-209ENST00000596104 CST4P01036 141 aa8.08□□□□□ -1.12
LIG1-209ENST00000596104 CD28P10747 220 aa8.08□□□□□ -1.12
LIG1-209ENST00000596104 PSG2P11465 335 aa8.08□□□□□ -1.12
LIG1-209ENST00000596104 HSD11B1P28845 292 aa8.08□□□□□ -1.12
LIG1-209ENST00000596104 OPRL1P41146 370 aa8.08□□□□□ -1.12
LIG1-209ENST00000596104 HMGA2P52926 109 aa8.08□□□□□ -1.12
LIG1-209ENST00000596104 PRDX4Q13162 271 aa8.08□□□□□ -1.12
LIG1-209ENST00000596104 EIF2B1Q14232 305 aaKnown RBP8.08□□□□□ -1.12
LIG1-209ENST00000596104 HABP2Q14520 560 aaPredicted RBP8.08□□□□□ -1.12
LIG1-209ENST00000596104 SNCBQ16143 134 aa8.08□□□□□ -1.12
LIG1-209ENST00000596104 NSUN5P1Q3KNT7 163 aa8.08□□□□□ -1.12
LIG1-209ENST00000596104 ZNF770Q6IQ21 691 aaPredicted RBP8.08□□□□□ -1.12
LIG1-209ENST00000596104 LIAT1Q6ZQX7 453 aa8.08□□□□□ -1.12
LIG1-209ENST00000596104 RASSF6Q6ZTQ3 369 aa8.08□□□□□ -1.12
LIG1-209ENST00000596104 NDUFA11Q86Y39 141 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms