RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 OR1M1Q8NGA1 313 aa10.89□□□□□ -0.67
VMP1-202ENST00000585847 OR51A4Q8NGJ6 313 aa10.89□□□□□ -0.67
VMP1-202ENST00000585847 ZNF671Q8TAW3 534 aa10.89□□□□□ -0.67
VMP1-202ENST00000585847 POM121Q96HA1 1249 aa10.89□□□□□ -0.67
VMP1-202ENST00000585847 MS4A3Q96HJ5 214 aa10.89□□□□□ -0.67
VMP1-202ENST00000585847 HS3ST6Q96QI5 342 aa10.89□□□□□ -0.67
VMP1-202ENST00000585847 SLC22A4Q9H015 551 aa10.89□□□□□ -0.67
VMP1-202ENST00000585847 PPIL3Q9H2H8 161 aaKnown RBP10.89□□□□□ -0.67
VMP1-202ENST00000585847 BRD7Q9NPI1 651 aa10.89□□□□□ -0.67
VMP1-202ENST00000585847 FBLN5Q9UBX5 448 aa10.89□□□□□ -0.67
VMP1-202ENST00000585847 RAI1Q7Z5J4 1906 aaPredicted RBP10.89□□□□□ -0.67
VMP1-202ENST00000585847 SETD2Q9BYW2 2564 aaPredicted RBP10.89□□□□□ -0.67
VMP1-202ENST00000585847 DCHS2Q6V1P9 2916 aa10.88□□□□□ -0.67
VMP1-202ENST00000585847 LOC100509620A0A075B734 347 aa10.88□□□□□ -0.67
VMP1-202ENST00000585847 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.88□□□□□ -0.67
VMP1-202ENST00000585847 SHISA3A0PJX4 238 aa10.88□□□□□ -0.67
VMP1-202ENST00000585847 BPNT1O95861 308 aa10.88□□□□□ -0.67
VMP1-202ENST00000585847 PLAUP00749 431 aa10.88□□□□□ -0.67
VMP1-202ENST00000585847 CECR9P0C854 216 aa10.88□□□□□ -0.67
VMP1-202ENST00000585847 SLC2A1P11166 492 aa10.88□□□□□ -0.67
VMP1-202ENST00000585847 PPP5CP53041 499 aa10.88□□□□□ -0.67
VMP1-202ENST00000585847 MRPS10P82664 201 aaKnown RBP10.88□□□□□ -0.67
VMP1-202ENST00000585847 SPOCK1Q08629 439 aa10.88□□□□□ -0.67
VMP1-202ENST00000585847 UBE2NLQ5JXB2 153 aa10.88□□□□□ -0.67
VMP1-202ENST00000585847 CLVS2Q5SYC1 327 aa10.88□□□□□ -0.67
VMP1-202ENST00000585847 IDNKQ5T6J7 187 aa10.88□□□□□ -0.67
VMP1-202ENST00000585847 FAM27D1Q5T7N8 215 aa10.88□□□□□ -0.67
VMP1-202ENST00000585847 TMEM42Q69YG0 159 aa10.88□□□□□ -0.67
VMP1-202ENST00000585847 ALKBH2Q6NS38 261 aa10.88□□□□□ -0.67
VMP1-202ENST00000585847 FBXW12Q6X9E4 464 aa10.88□□□□□ -0.67
VMP1-202ENST00000585847 MRPL21Q7Z2W9 205 aaKnown RBP10.88□□□□□ -0.67
VMP1-202ENST00000585847 OR10AC1Q8NH08 325 aa10.88□□□□□ -0.67
VMP1-202ENST00000585847 SGK3Q96BR1 496 aa10.88□□□□□ -0.67
VMP1-202ENST00000585847 FGGYQ96C11 551 aa10.88□□□□□ -0.67
VMP1-202ENST00000585847 REPIN1Q9BWE0 567 aaKnown RBP10.88□□□□□ -0.67
VMP1-202ENST00000585847 PCDHB16Q9NRJ7 776 aa10.88□□□□□ -0.67
VMP1-202ENST00000585847 KCNN3Q9UGI6 736 aa10.88□□□□□ -0.67
VMP1-202ENST00000585847 DAPK2Q9UIK4 370 aa10.88□□□□□ -0.67
VMP1-202ENST00000585847 ABCA4P78363 2273 aa10.87□□□□□ -0.67
VMP1-202ENST00000585847 ISPDA4D126 451 aa10.87□□□□□ -0.67
VMP1-202ENST00000585847 H3BUI4 141 aa10.87□□□□□ -0.67
VMP1-202ENST00000585847 M0R1B8 84 aa10.87□□□□□ -0.67
VMP1-202ENST00000585847 ZNF780AO75290 641 aaPredicted RBP10.87□□□□□ -0.67
VMP1-202ENST00000585847 CST4P01036 141 aa10.87□□□□□ -0.67
VMP1-202ENST00000585847 DBHP09172 617 aa10.87□□□□□ -0.67
VMP1-202ENST00000585847 CD40P25942 277 aa10.87□□□□□ -0.67
VMP1-202ENST00000585847 CALCRP30988 508 aa10.87□□□□□ -0.67
VMP1-202ENST00000585847 THBS2P35442 1172 aa10.87□□□□□ -0.67
VMP1-202ENST00000585847 MNDAP41218 407 aa10.87□□□□□ -0.67
VMP1-202ENST00000585847 ALDH3B1P43353 468 aa10.87□□□□□ -0.67
VMP1-202ENST00000585847 IDH3GP51553 393 aaPredicted RBP10.87□□□□□ -0.67
VMP1-202ENST00000585847 PITPNAQ00169 270 aa10.87□□□□□ -0.67
VMP1-202ENST00000585847 ODF4Q2M2E3 257 aa10.87□□□□□ -0.67
VMP1-202ENST00000585847 SNAI3Q3KNW1 292 aa10.87□□□□□ -0.67
VMP1-202ENST00000585847 HACD4Q5VWC8 232 aa10.87□□□□□ -0.67
VMP1-202ENST00000585847 OR2W3Q7Z3T1 314 aa10.87□□□□□ -0.67
VMP1-202ENST00000585847 MFSD4AQ8N468 514 aa10.87□□□□□ -0.67
VMP1-202ENST00000585847 GDPD1Q8N9F7 314 aa10.87□□□□□ -0.67
VMP1-202ENST00000585847 LILRB1Q8NHL6 650 aaPredicted RBP10.87□□□□□ -0.67
VMP1-202ENST00000585847 TRMT10AQ8TBZ6 339 aaKnown RBP10.87□□□□□ -0.67
VMP1-202ENST00000585847 PLPPR2Q96GM1 343 aa10.87□□□□□ -0.67
VMP1-202ENST00000585847 FAM71F1Q96KD3 344 aaPredicted RBP10.87□□□□□ -0.67
VMP1-202ENST00000585847 NUDT16L1Q9BRJ7 211 aaKnown RBP10.87□□□□□ -0.67
VMP1-202ENST00000585847 TMEM204Q9BSN7 226 aa10.87□□□□□ -0.67
VMP1-202ENST00000585847 ABCG5Q9H222 651 aa10.87□□□□□ -0.67
VMP1-202ENST00000585847 CYSLTR2Q9NS75 346 aa10.87□□□□□ -0.67
VMP1-202ENST00000585847 TAS2R4Q9NYW5 299 aa10.87□□□□□ -0.67
VMP1-202ENST00000585847 SLC7A11Q9UPY5 501 aa10.87□□□□□ -0.67
VMP1-202ENST00000585847 AK6Q9Y3D8 172 aaKnown RBP10.87□□□□□ -0.67
VMP1-202ENST00000585847 MPC1Q9Y5U8 109 aa10.87□□□□□ -0.67
VMP1-202ENST00000585847 CCDC168Q8NDH2 2452 aa10.86□□□□□ -0.67
VMP1-202ENST00000585847 HIVEP1P15822 2718 aa10.86□□□□□ -0.67
VMP1-202ENST00000585847 ANKHD1Q8IWZ3 2542 aaKnown RBP10.86□□□□□ -0.67
VMP1-202ENST00000585847 TRAV8-7A0A075B6U6 113 aa10.86□□□□□ -0.67
VMP1-202ENST00000585847 LOC100289279A0A1B0GTE1 492 aa10.86□□□□□ -0.67
VMP1-202ENST00000585847 A6NNC1 897 aa10.86□□□□□ -0.67
VMP1-202ENST00000585847 CLEC2LP0C7M8 214 aa10.86□□□□□ -0.67
VMP1-202ENST00000585847 RAC2P15153 192 aa10.86□□□□□ -0.67
VMP1-202ENST00000585847 ADRA2CP18825 462 aa10.86□□□□□ -0.67
VMP1-202ENST00000585847 ATF1P18846 271 aa10.86□□□□□ -0.67
VMP1-202ENST00000585847 RAB6AP20340 208 aa10.86□□□□□ -0.67
VMP1-202ENST00000585847 HTR2CP28335 458 aa10.86□□□□□ -0.67
VMP1-202ENST00000585847 GSK3AP49840 483 aa10.86□□□□□ -0.67
VMP1-202ENST00000585847 FAM3AP98173 230 aa10.86□□□□□ -0.67
VMP1-202ENST00000585847 NAAAQ02083 359 aa10.86□□□□□ -0.67
VMP1-202ENST00000585847 BSPH1Q075Z2 132 aa10.86□□□□□ -0.67
VMP1-202ENST00000585847 MZT1Q08AG7 82 aa10.86□□□□□ -0.67
VMP1-202ENST00000585847 ARL6IP1Q15041 203 aa10.86□□□□□ -0.67
VMP1-202ENST00000585847 GFOD2Q3B7J2 385 aa10.86□□□□□ -0.67
VMP1-202ENST00000585847 BEX5Q5H9J7 111 aa10.86□□□□□ -0.67
VMP1-202ENST00000585847 GLYATL3Q5SZD4 288 aa10.86□□□□□ -0.67
VMP1-202ENST00000585847 RAB12Q6IQ22 244 aa10.86□□□□□ -0.67
VMP1-202ENST00000585847 FAM166AQ6J272 317 aa10.86□□□□□ -0.67
VMP1-202ENST00000585847 LHFPL2Q6ZUX7 228 aa10.86□□□□□ -0.67
VMP1-202ENST00000585847 PAQR4Q8N4S7 273 aaPredicted RBP10.86□□□□□ -0.67
VMP1-202ENST00000585847 ITPKCQ96DU7 683 aa10.86□□□□□ -0.67
VMP1-202ENST00000585847 ADAT3Q96EY9 351 aaPredicted RBP10.86□□□□□ -0.67
VMP1-202ENST00000585847 LIN7BQ9HAP6 207 aa10.86□□□□□ -0.67
VMP1-202ENST00000585847 MRPL15Q9P015 296 aaKnown RBP10.86□□□□□ -0.67
VMP1-202ENST00000585847 CGGBP1Q9UFW8 167 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms