RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 RPP25Q9BUL9 199 aaKnown RBP12.88□□□□□ -0.35
SCARF1-209ENST00000576012 ZNF700Q9H0M5 742 aa12.88□□□□□ -0.35
SCARF1-209ENST00000576012 G6PC2Q9NQR9 355 aa12.88□□□□□ -0.35
SCARF1-209ENST00000576012 DOK5Q9P104 306 aa12.88□□□□□ -0.35
SCARF1-209ENST00000576012 TMEM184BQ9Y519 407 aaPredicted RBP12.88□□□□□ -0.35
SCARF1-209ENST00000576012 LINC01553A4QN01 128 aa12.88□□□□□ -0.35
SCARF1-209ENST00000576012 C2orf74A8MZ97 194 aa12.88□□□□□ -0.35
SCARF1-209ENST00000576012 IFNA17P01571 189 aa12.88□□□□□ -0.35
SCARF1-209ENST00000576012 FOLR2P14207 255 aa12.88□□□□□ -0.35
SCARF1-209ENST00000576012 GPR3P46089 330 aa12.88□□□□□ -0.35
SCARF1-209ENST00000576012 OR1D4P47884 311 aa12.88□□□□□ -0.35
SCARF1-209ENST00000576012 SURF2Q15527 256 aaPredicted RBP12.88□□□□□ -0.35
SCARF1-209ENST00000576012 RPUSD3Q6P087 351 aaKnown RBP12.88□□□□□ -0.35
SCARF1-209ENST00000576012 BRICD5Q6PL45 260 aa12.88□□□□□ -0.35
SCARF1-209ENST00000576012 AQP10Q96PS8 301 aa12.88□□□□□ -0.35
SCARF1-209ENST00000576012 IGLV1-36A0A0B4J1U3 117 aa12.87□□□□□ -0.35
SCARF1-209ENST00000576012 FAM221AA4D161 298 aa12.87□□□□□ -0.35
SCARF1-209ENST00000576012 ZNF729A6NN14 1252 aaPredicted RBP12.87□□□□□ -0.35
SCARF1-209ENST00000576012 PPIHO43447 177 aaKnown RBP12.87□□□□□ -0.35
SCARF1-209ENST00000576012 C5AR1P21730 350 aa12.87□□□□□ -0.35
SCARF1-209ENST00000576012 CDAP32320 146 aa12.87□□□□□ -0.35
SCARF1-209ENST00000576012 NOVA1P51513 510 aaKnown RBP12.87□□□□□ -0.35
SCARF1-209ENST00000576012 RAP1AP62834 184 aa12.87□□□□□ -0.35
SCARF1-209ENST00000576012 GABREP78334 506 aa12.87□□□□□ -0.35
SCARF1-209ENST00000576012 POU3F1Q03052 451 aaPredicted RBP12.87□□□□□ -0.35
SCARF1-209ENST00000576012 RSU1Q15404 277 aa12.87□□□□□ -0.35
SCARF1-209ENST00000576012 ARMC6Q6NXE6 501 aa12.87□□□□□ -0.35
SCARF1-209ENST00000576012 SLC22A24Q8N4F4 322 aa12.87□□□□□ -0.35
SCARF1-209ENST00000576012 SUMF1Q8NBK3 374 aa12.87□□□□□ -0.35
SCARF1-209ENST00000576012 UBAC2Q8NBM4 344 aa12.87□□□□□ -0.35
SCARF1-209ENST00000576012 OR51T1Q8NGJ9 327 aa12.87□□□□□ -0.35
SCARF1-209ENST00000576012 SPPL3Q8TCT6 385 aa12.87□□□□□ -0.35
SCARF1-209ENST00000576012 TSLPQ969D9 159 aa12.87□□□□□ -0.35
SCARF1-209ENST00000576012 C5orf34Q96MH7 638 aa12.87□□□□□ -0.35
SCARF1-209ENST00000576012 TBL1XR1Q9BZK7 514 aa12.87□□□□□ -0.35
SCARF1-209ENST00000576012 VDAC3Q9Y277 283 aa12.87□□□□□ -0.35
SCARF1-209ENST00000576012 TRBV6-7A0A0A0MS04 114 aa12.87□□□□□ -0.35
SCARF1-209ENST00000576012 NUDT19A8MXV4 375 aa12.87□□□□□ -0.35
SCARF1-209ENST00000576012 GPR89AB7ZAQ6 455 aa12.87□□□□□ -0.35
SCARF1-209ENST00000576012 FAM157AC9JC47 383 aa12.87□□□□□ -0.35
SCARF1-209ENST00000576012 GATCO43716 136 aaKnown RBP12.87□□□□□ -0.35
SCARF1-209ENST00000576012 CST4P01036 141 aa12.87□□□□□ -0.35
SCARF1-209ENST00000576012 GPR89BP0CG08 455 aa12.87□□□□□ -0.35
SCARF1-209ENST00000576012 FABP4P15090 132 aa12.87□□□□□ -0.35
SCARF1-209ENST00000576012 RAB5CP51148 216 aa12.87□□□□□ -0.35
SCARF1-209ENST00000576012 TMEM50BP56557 158 aa12.87□□□□□ -0.35
SCARF1-209ENST00000576012 TAS2R31P59538 309 aa12.87□□□□□ -0.35
SCARF1-209ENST00000576012 NHLH2Q02577 135 aa12.87□□□□□ -0.35
SCARF1-209ENST00000576012 SOHLH1Q5JUK2 328 aa12.87□□□□□ -0.35
SCARF1-209ENST00000576012 KLHL24Q6TFL4 600 aa12.87□□□□□ -0.35
SCARF1-209ENST00000576012 BATF2Q8N1L9 274 aa12.87□□□□□ -0.35
SCARF1-209ENST00000576012 FNDC9Q8TBE3 224 aa12.87□□□□□ -0.35
SCARF1-209ENST00000576012 ADAMTS18Q8TE60 1221 aa12.87□□□□□ -0.35
SCARF1-209ENST00000576012 TMEM59Q9BXS4 323 aa12.87□□□□□ -0.35
SCARF1-209ENST00000576012 RAB18Q9NP72 206 aa12.87□□□□□ -0.35
SCARF1-209ENST00000576012 HTR5AP47898 357 aa12.87□□□□□ -0.35
SCARF1-209ENST00000576012 CHAF1BQ13112 559 aa12.87□□□□□ -0.35
SCARF1-209ENST00000576012 PNLIPRP3Q17RR3 467 aa12.87□□□□□ -0.35
SCARF1-209ENST00000576012 POC1AQ8NBT0 407 aa12.87□□□□□ -0.35
SCARF1-209ENST00000576012 LPAR5Q9H1C0 372 aa12.87□□□□□ -0.35
SCARF1-209ENST00000576012 NELFAQ9H3P2 528 aa12.87□□□□□ -0.35
SCARF1-209ENST00000576012 UNKLQ9H9P5 680 aaKnown RBP12.87□□□□□ -0.35
SCARF1-209ENST00000576012 GAR1Q9NY12 217 aaKnown RBP12.87□□□□□ -0.35
SCARF1-209ENST00000576012 FRYLO94915 3013 aa12.86□□□□□ -0.35
SCARF1-209ENST00000576012 FGF19O95750 216 aa12.86□□□□□ -0.35
SCARF1-209ENST00000576012 SNCAP37840 140 aa12.86□□□□□ -0.35
SCARF1-209ENST00000576012 GABRA4P48169 554 aa12.86□□□□□ -0.35
SCARF1-209ENST00000576012 RPS23P62266 143 aaKnown RBP12.86□□□□□ -0.35
SCARF1-209ENST00000576012 CCL20P78556 96 aa12.86□□□□□ -0.35
SCARF1-209ENST00000576012 PRTGQ2VWP7 1150 aa12.86□□□□□ -0.35
SCARF1-209ENST00000576012 CHRFAM7AQ494W8 412 aa12.86□□□□□ -0.35
SCARF1-209ENST00000576012 NSUN5P2Q63ZY6 315 aa12.86□□□□□ -0.35
SCARF1-209ENST00000576012 SLC37A2Q8TED4 501 aa12.86□□□□□ -0.35
SCARF1-209ENST00000576012 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.86□□□□□ -0.35
SCARF1-209ENST00000576012 ELSPBP1Q96BH3 223 aa12.86□□□□□ -0.35
SCARF1-209ENST00000576012 ZNF775Q96BV0 537 aaPredicted RBP12.86□□□□□ -0.35
SCARF1-209ENST00000576012 ZDHHC8Q9ULC8 765 aa12.86□□□□□ -0.35
SCARF1-209ENST00000576012 MYO7BQ6PIF6 2116 aa12.86□□□□□ -0.35
SCARF1-209ENST00000576012 B4DGG1 531 aa12.86□□□□□ -0.35
SCARF1-209ENST00000576012 IL12BP29460 328 aa12.86□□□□□ -0.35
SCARF1-209ENST00000576012 OPRM1P35372 400 aa12.86□□□□□ -0.35
SCARF1-209ENST00000576012 PTGER4P35408 488 aa12.86□□□□□ -0.35
SCARF1-209ENST00000576012 TAGLN2P37802 199 aaKnown RBP12.86□□□□□ -0.35
SCARF1-209ENST00000576012 EIF5AP63241 154 aaKnown RBP12.86□□□□□ -0.35
SCARF1-209ENST00000576012 RUNX3Q13761 415 aa12.86□□□□□ -0.35
SCARF1-209ENST00000576012 PHLDA2Q53GA4 152 aa12.86□□□□□ -0.35
SCARF1-209ENST00000576012 ZFP62Q8NB50 900 aaPredicted RBP12.86□□□□□ -0.35
SCARF1-209ENST00000576012 FAM212BQ9NTI7 297 aaPredicted RBP12.86□□□□□ -0.35
SCARF1-209ENST00000576012 IGKV1D-8A0A087WSZ0 117 aa12.86□□□□□ -0.35
SCARF1-209ENST00000576012 TGIF2-C20orf24A0A0A6YYL0 155 aa12.86□□□□□ -0.35
SCARF1-209ENST00000576012 H0YL77 283 aa12.86□□□□□ -0.35
SCARF1-209ENST00000576012 TTRP02766 147 aa12.86□□□□□ -0.35
SCARF1-209ENST00000576012 PET100P0DJ07 73 aa12.86□□□□□ -0.35
SCARF1-209ENST00000576012 GABRR1P24046 479 aa12.86□□□□□ -0.35
SCARF1-209ENST00000576012 BLVRBP30043 206 aaPredicted RBP12.86□□□□□ -0.35
SCARF1-209ENST00000576012 C1orf100Q5SVJ3 147 aa12.86□□□□□ -0.35
SCARF1-209ENST00000576012 C1QL2Q7Z5L3 287 aa12.86□□□□□ -0.35
SCARF1-209ENST00000576012 SUMF2Q8NBJ7 301 aa12.86□□□□□ -0.35
SCARF1-209ENST00000576012 OR5D14Q8NGL3 314 aa12.86□□□□□ -0.35
SCARF1-209ENST00000576012 PHOSPHO2Q8TCD6 241 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms