RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 CLEC12BQ2HXU8 276 aa11.85□□□□□ -0.51
RPAIN-217ENST00000575711 CLVS2Q5SYC1 327 aa11.85□□□□□ -0.51
RPAIN-217ENST00000575711 PLCXD3Q63HM9 321 aa11.85□□□□□ -0.51
RPAIN-217ENST00000575711 ZNF773Q6PK81 442 aa11.85□□□□□ -0.51
RPAIN-217ENST00000575711 MOB3CQ70IA8 216 aa11.85□□□□□ -0.51
RPAIN-217ENST00000575711 ZNF367Q7RTV3 350 aa11.85□□□□□ -0.51
RPAIN-217ENST00000575711 SPARTQ8N0X7 666 aa11.85□□□□□ -0.51
RPAIN-217ENST00000575711 OR51A4Q8NGJ6 313 aa11.85□□□□□ -0.51
RPAIN-217ENST00000575711 OR10AC1Q8NH08 325 aa11.85□□□□□ -0.51
RPAIN-217ENST00000575711 GPR148Q8TDV2 347 aa11.85□□□□□ -0.51
RPAIN-217ENST00000575711 ITPKCQ96DU7 683 aa11.85□□□□□ -0.51
RPAIN-217ENST00000575711 RTL8AQ9BWD3 113 aa11.85□□□□□ -0.51
RPAIN-217ENST00000575711 PPP1R3EQ9H7J1 279 aa11.85□□□□□ -0.51
RPAIN-217ENST00000575711 ISYNA1Q9NPH2 558 aa11.85□□□□□ -0.51
RPAIN-217ENST00000575711 ACOT13Q9NPJ3 140 aa11.85□□□□□ -0.51
RPAIN-217ENST00000575711 ZNF275Q9NSD4 429 aaPredicted RBP11.85□□□□□ -0.51
RPAIN-217ENST00000575711 DHDHQ9UQ10 334 aa11.85□□□□□ -0.51
RPAIN-217ENST00000575711 POLQO75417 2590 aa11.85□□□□□ -0.51
RPAIN-217ENST00000575711 ANKRD17O75179 2603 aaKnown RBP11.84□□□□□ -0.51
RPAIN-217ENST00000575711 ANKRD61A6NGH8 418 aa11.84□□□□□ -0.51
RPAIN-217ENST00000575711 TRIM64A6NGJ6 449 aa11.84□□□□□ -0.51
RPAIN-217ENST00000575711 LYNX1G3V0Z9 82 aa11.84□□□□□ -0.51
RPAIN-217ENST00000575711 LMX1BO60663 402 aa11.84□□□□□ -0.51
RPAIN-217ENST00000575711 GATBO75879 557 aaKnown RBP11.84□□□□□ -0.51
RPAIN-217ENST00000575711 LYNX1P0DP58 116 aa11.84□□□□□ -0.51
RPAIN-217ENST00000575711 COL8A2P25067 703 aa11.84□□□□□ -0.51
RPAIN-217ENST00000575711 EMX1Q04741 257 aaPredicted RBP11.84□□□□□ -0.51
RPAIN-217ENST00000575711 MLLT11Q13015 90 aaPredicted RBP11.84□□□□□ -0.51
RPAIN-217ENST00000575711 HFEQ30201 348 aa11.84□□□□□ -0.51
RPAIN-217ENST00000575711 CEACAM21Q3KPI0 293 aa11.84□□□□□ -0.51
RPAIN-217ENST00000575711 SPRNQ5BIV9 151 aa11.84□□□□□ -0.51
RPAIN-217ENST00000575711 YIF1BQ5BJH7 314 aa11.84□□□□□ -0.51
RPAIN-217ENST00000575711 CEP78Q5JTW2 689 aa11.84□□□□□ -0.51
RPAIN-217ENST00000575711 TMEM42Q69YG0 159 aa11.84□□□□□ -0.51
RPAIN-217ENST00000575711 KCTD8Q6ZWB6 473 aa11.84□□□□□ -0.51
RPAIN-217ENST00000575711 KRTAP1-3Q8IUG1 177 aa11.84□□□□□ -0.51
RPAIN-217ENST00000575711 PP6455Q8WZ26 134 aa11.84□□□□□ -0.51
RPAIN-217ENST00000575711 OR5P3Q8WZ94 311 aa11.84□□□□□ -0.51
RPAIN-217ENST00000575711 FAM168AQ92567 244 aa11.84□□□□□ -0.51
RPAIN-217ENST00000575711 UFD1Q92890 307 aa11.84□□□□□ -0.51
RPAIN-217ENST00000575711 ERGIC1Q969X5 290 aa11.84□□□□□ -0.51
RPAIN-217ENST00000575711 FGGYQ96C11 551 aa11.84□□□□□ -0.51
RPAIN-217ENST00000575711 RNF170Q96K19 258 aa11.84□□□□□ -0.51
RPAIN-217ENST00000575711 PGLYRP3Q96LB9 341 aa11.84□□□□□ -0.51
RPAIN-217ENST00000575711 TECTBQ96PL2 329 aa11.84□□□□□ -0.51
RPAIN-217ENST00000575711 CHODLQ9H9P2 273 aa11.84□□□□□ -0.51
RPAIN-217ENST00000575711 GPR173Q9NS66 373 aa11.84□□□□□ -0.51
RPAIN-217ENST00000575711 PPP1R3CQ9UQK1 317 aa11.84□□□□□ -0.51
RPAIN-217ENST00000575711 PDZD2O15018 2839 aa11.84□□□□□ -0.51
RPAIN-217ENST00000575711 IGHV3-64DA0A0J9YX35 117 aa11.83□□□□□ -0.52
RPAIN-217ENST00000575711 LOC100289279A0A1B0GTE1 492 aa11.83□□□□□ -0.52
RPAIN-217ENST00000575711 OR5B21A6NL26 309 aa11.83□□□□□ -0.52
RPAIN-217ENST00000575711 A6NLC8 198 aa11.83□□□□□ -0.52
RPAIN-217ENST00000575711 TMEM210A6NLX4 147 aa11.83□□□□□ -0.52
RPAIN-217ENST00000575711 NDUFS8O00217 210 aa11.83□□□□□ -0.52
RPAIN-217ENST00000575711 CD2P06729 351 aa11.83□□□□□ -0.52
RPAIN-217ENST00000575711 GRPP07492 148 aa11.83□□□□□ -0.52
RPAIN-217ENST00000575711 OCM2P0CE71 109 aa11.83□□□□□ -0.52
RPAIN-217ENST00000575711 GATA4P43694 442 aa11.83□□□□□ -0.52
RPAIN-217ENST00000575711 SOX2P48431 317 aa11.83□□□□□ -0.52
RPAIN-217ENST00000575711 PRAMEF6Q5VXH4 476 aa11.83□□□□□ -0.52
RPAIN-217ENST00000575711 MOGAT3Q86VF5 341 aa11.83□□□□□ -0.52
RPAIN-217ENST00000575711 OR5A2Q8NGI9 324 aa11.83□□□□□ -0.52
RPAIN-217ENST00000575711 HPSE2Q8WWQ2 592 aa11.83□□□□□ -0.52
RPAIN-217ENST00000575711 RGP1Q92546 391 aaPredicted RBP11.83□□□□□ -0.52
RPAIN-217ENST00000575711 CCL17Q92583 94 aa11.83□□□□□ -0.52
RPAIN-217ENST00000575711 FCGR1BQ92637 280 aa11.83□□□□□ -0.52
RPAIN-217ENST00000575711 YIPF5Q969M3 257 aa11.83□□□□□ -0.52
RPAIN-217ENST00000575711 ADAT3Q96EY9 351 aaPredicted RBP11.83□□□□□ -0.52
RPAIN-217ENST00000575711 MGLLQ99685 303 aa11.83□□□□□ -0.52
RPAIN-217ENST00000575711 PIMREGQ9BSJ6 248 aa11.83□□□□□ -0.52
RPAIN-217ENST00000575711 CHST5Q9GZS9 411 aa11.83□□□□□ -0.52
RPAIN-217ENST00000575711 FN3KRPQ9HA64 309 aa11.83□□□□□ -0.52
RPAIN-217ENST00000575711 GCM1Q9NP62 436 aa11.83□□□□□ -0.52
RPAIN-217ENST00000575711 TREM2Q9NZC2 230 aa11.83□□□□□ -0.52
RPAIN-217ENST00000575711 SLC7A11Q9UPY5 501 aa11.83□□□□□ -0.52
RPAIN-217ENST00000575711 CSMD1Q96PZ7 3565 aa11.82□□□□□ -0.52
RPAIN-217ENST00000575711 CLDN25C9JDP6 229 aa11.82□□□□□ -0.52
RPAIN-217ENST00000575711 IFNL4K9M1U5 179 aa11.82□□□□□ -0.52
RPAIN-217ENST00000575711 RP2O75695 350 aa11.82□□□□□ -0.52
RPAIN-217ENST00000575711 PTBP3O95758 552 aaKnown RBP11.82□□□□□ -0.52
RPAIN-217ENST00000575711 OCMP0CE72 109 aaPredicted RBP11.82□□□□□ -0.52
RPAIN-217ENST00000575711 IRF2P14316 349 aa11.82□□□□□ -0.52
RPAIN-217ENST00000575711 THBS2P35442 1172 aa11.82□□□□□ -0.52
RPAIN-217ENST00000575711 GPM6AP51674 278 aa11.82□□□□□ -0.52
RPAIN-217ENST00000575711 GNG3P63215 75 aa11.82□□□□□ -0.52
RPAIN-217ENST00000575711 GPR50Q13585 617 aa11.82□□□□□ -0.52
RPAIN-217ENST00000575711 TPBGQ13641 420 aa11.82□□□□□ -0.52
RPAIN-217ENST00000575711 CNN3Q15417 329 aaKnown RBP11.82□□□□□ -0.52
RPAIN-217ENST00000575711 LIPKQ5VXJ0 399 aa11.82□□□□□ -0.52
RPAIN-217ENST00000575711 DNM1P46Q6ZS02 220 aa11.82□□□□□ -0.52
RPAIN-217ENST00000575711 UTS2BQ765I0 119 aa11.82□□□□□ -0.52
RPAIN-217ENST00000575711 SERPINA12Q8IW75 414 aa11.82□□□□□ -0.52
RPAIN-217ENST00000575711 MS4A15Q8N5U1 240 aa11.82□□□□□ -0.52
RPAIN-217ENST00000575711 WFDC11Q8NEX6 87 aa11.82□□□□□ -0.52
RPAIN-217ENST00000575711 OR1M1Q8NGA1 313 aa11.82□□□□□ -0.52
RPAIN-217ENST00000575711 OR11L1Q8NGX0 322 aa11.82□□□□□ -0.52
RPAIN-217ENST00000575711 ZNF420Q8TAQ5 688 aaPredicted RBP11.82□□□□□ -0.52
RPAIN-217ENST00000575711 C10orf105Q8TEF2 133 aa11.82□□□□□ -0.52
RPAIN-217ENST00000575711 HPS1Q92902 700 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms