RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 FBLN5Q9UBX5 448 aa17.13■□□□□ 0.33
HERC2-204ENST00000563945 SF3B6Q9Y3B4 125 aaKnown RBP17.13■□□□□ 0.33
HERC2-204ENST00000563945 RHBDD3Q9Y3P4 386 aa17.13■□□□□ 0.33
HERC2-204ENST00000563945 MPC1Q9Y5U8 109 aa17.13■□□□□ 0.33
HERC2-204ENST00000563945 hCG_38984A0A1B0GV85 526 aa17.12■□□□□ 0.33
HERC2-204ENST00000563945 RIIAD1A6NNX1 92 aa17.12■□□□□ 0.33
HERC2-204ENST00000563945 GASTP01350 101 aa17.12■□□□□ 0.33
HERC2-204ENST00000563945 H2BFMP0C1H6 154 aa17.12■□□□□ 0.33
HERC2-204ENST00000563945 HMGA2P52926 109 aa17.12■□□□□ 0.33
HERC2-204ENST00000563945 ZNF121P58317 390 aaPredicted RBP17.12■□□□□ 0.33
HERC2-204ENST00000563945 HERPUD1Q15011 391 aa17.12■□□□□ 0.33
HERC2-204ENST00000563945 STUMQ69YW2 141 aa17.12■□□□□ 0.33
HERC2-204ENST00000563945 SHFQ7M4L6 423 aa17.12■□□□□ 0.33
HERC2-204ENST00000563945 ERI1Q8IV48 349 aaKnown RBP17.12■□□□□ 0.33
HERC2-204ENST00000563945 TIGD4Q8IY51 512 aa17.12■□□□□ 0.33
HERC2-204ENST00000563945 Q8N7P7 452 aa17.12■□□□□ 0.33
HERC2-204ENST00000563945 OR10Z1Q8NGY1 313 aa17.12■□□□□ 0.33
HERC2-204ENST00000563945 C8orf46Q8TAG6 207 aa17.12■□□□□ 0.33
HERC2-204ENST00000563945 INTS14Q96SY0 518 aa17.12■□□□□ 0.33
HERC2-204ENST00000563945 CDRT15Q96T59 188 aa17.12■□□□□ 0.33
HERC2-204ENST00000563945 RGCCQ9H4X1 137 aa17.12■□□□□ 0.33
HERC2-204ENST00000563945 TET2Q6N021 2002 aaPredicted RBP17.11■□□□□ 0.33
HERC2-204ENST00000563945 TMEM210A6NLX4 147 aa17.11■□□□□ 0.33
HERC2-204ENST00000563945 H0YAE9 185 aa17.11■□□□□ 0.33
HERC2-204ENST00000563945 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.11■□□□□ 0.33
HERC2-204ENST00000563945 M0R1W7 72 aa17.11■□□□□ 0.33
HERC2-204ENST00000563945 ZNF3P17036 446 aa17.11■□□□□ 0.33
HERC2-204ENST00000563945 DTX3Q8N9I9 347 aa17.11■□□□□ 0.33
HERC2-204ENST00000563945 PAPD5Q8NDF8 572 aaKnown RBP17.11■□□□□ 0.33
HERC2-204ENST00000563945 OR51G2Q8NGK0 314 aa17.11■□□□□ 0.33
HERC2-204ENST00000563945 OR8D4Q8NGM9 314 aa17.11■□□□□ 0.33
HERC2-204ENST00000563945 RNF170Q96K19 258 aa17.11■□□□□ 0.33
HERC2-204ENST00000563945 RAB3IPQ96QF0 476 aaPredicted RBP17.11■□□□□ 0.33
HERC2-204ENST00000563945 BTBD10Q9BSF8 475 aa17.11■□□□□ 0.33
HERC2-204ENST00000563945 ABHD6Q9BV23 337 aa17.11■□□□□ 0.33
HERC2-204ENST00000563945 TLNRD1Q9H1K6 362 aa17.11■□□□□ 0.33
HERC2-204ENST00000563945 MYLK2Q9H1R3 596 aa17.11■□□□□ 0.33
HERC2-204ENST00000563945 LYVE1Q9Y5Y7 322 aa17.11■□□□□ 0.33
HERC2-204ENST00000563945 ZNF850A8MQ14 1090 aa17.1■□□□□ 0.33
HERC2-204ENST00000563945 H3BUX3 64 aa17.1■□□□□ 0.33
HERC2-204ENST00000563945 AKR7A2O43488 359 aa17.1■□□□□ 0.33
HERC2-204ENST00000563945 CLUP10909 449 aa17.1■□□□□ 0.33
HERC2-204ENST00000563945 SELLP14151 372 aa17.1■□□□□ 0.33
HERC2-204ENST00000563945 GABRA2P47869 451 aa17.1■□□□□ 0.33
HERC2-204ENST00000563945 DLX1P56177 255 aa17.1■□□□□ 0.33
HERC2-204ENST00000563945 PRDX4Q13162 271 aa17.1■□□□□ 0.33
HERC2-204ENST00000563945 C11orf88Q6PI97 169 aa17.1■□□□□ 0.33
HERC2-204ENST00000563945 PGAM4Q8N0Y7 254 aa17.1■□□□□ 0.33
HERC2-204ENST00000563945 PNKDQ8N490 385 aa17.1■□□□□ 0.33
HERC2-204ENST00000563945 AQP11Q8NBQ7 271 aa17.1■□□□□ 0.33
HERC2-204ENST00000563945 BEND2Q8NDZ0 799 aa17.1■□□□□ 0.33
HERC2-204ENST00000563945 OR5D13Q8NGL4 314 aa17.1■□□□□ 0.33
HERC2-204ENST00000563945 OR4C13Q8NGP0 309 aa17.1■□□□□ 0.33
HERC2-204ENST00000563945 RNF133Q8WVZ7 376 aa17.1■□□□□ 0.33
HERC2-204ENST00000563945 PIGCQ92535 297 aa17.1■□□□□ 0.33
HERC2-204ENST00000563945 RPL3LQ92901 407 aaKnown RBP17.1■□□□□ 0.33
HERC2-204ENST00000563945 ITPKCQ96DU7 683 aa17.1■□□□□ 0.33
HERC2-204ENST00000563945 SSX3Q99909 188 aa17.1■□□□□ 0.33
HERC2-204ENST00000563945 NMNAT2Q9BZQ4 307 aa17.1■□□□□ 0.33
HERC2-204ENST00000563945 PPP1R3EQ9H7J1 279 aa17.1■□□□□ 0.33
HERC2-204ENST00000563945 AMY2BP19961 511 aa17.09■□□□□ 0.33
HERC2-204ENST00000563945 GSTT1P30711 240 aa17.09■□□□□ 0.33
HERC2-204ENST00000563945 FBLN7Q53RD9 439 aa17.09■□□□□ 0.33
HERC2-204ENST00000563945 ZNF788Q6ZQV5 615 aa17.09■□□□□ 0.33
HERC2-204ENST00000563945 OR2T6Q8NHC8 308 aa17.09■□□□□ 0.33
HERC2-204ENST00000563945 TNFRSF14Q92956 283 aa17.09■□□□□ 0.33
HERC2-204ENST00000563945 DUS3LQ96G46 650 aaKnown RBP17.09■□□□□ 0.33
HERC2-204ENST00000563945 CLPTM1LQ96KA5 538 aa17.09■□□□□ 0.33
HERC2-204ENST00000563945 WDR13Q9H1Z4 485 aa17.09■□□□□ 0.33
HERC2-204ENST00000563945 RAB18Q9NP72 206 aa17.09■□□□□ 0.33
HERC2-204ENST00000563945 SIGLEC5O15389 551 aa17.08■□□□□ 0.32
HERC2-204ENST00000563945 SOX14O95416 240 aa17.08■□□□□ 0.32
HERC2-204ENST00000563945 GLRA1P23415 457 aa17.08■□□□□ 0.32
HERC2-204ENST00000563945 CAV3P56539 151 aa17.08■□□□□ 0.32
HERC2-204ENST00000563945 MXRA7P84157 204 aa17.08■□□□□ 0.32
HERC2-204ENST00000563945 LY6EQ16553 131 aa17.08■□□□□ 0.32
HERC2-204ENST00000563945 OR4Q3Q8NH05 313 aa17.08■□□□□ 0.32
HERC2-204ENST00000563945 OR5P3Q8WZ94 311 aa17.08■□□□□ 0.32
HERC2-204ENST00000563945 GAFA1Q96PS6 74 aa17.08■□□□□ 0.32
HERC2-204ENST00000563945 FAM107BQ9H098 131 aa17.08■□□□□ 0.32
HERC2-204ENST00000563945 ARMC1Q9NVT9 282 aa17.08■□□□□ 0.32
HERC2-204ENST00000563945 NDE1Q9NXR1 346 aa17.08■□□□□ 0.32
HERC2-204ENST00000563945 NLKQ9UBE8 527 aa17.08■□□□□ 0.32
HERC2-204ENST00000563945 PRKDCP78527 4128 aaKnown RBP17.08■□□□□ 0.32
HERC2-204ENST00000563945 OR2AT4A6NND4 320 aa17.07■□□□□ 0.32
HERC2-204ENST00000563945 ANGPTL7O43827 346 aa17.07■□□□□ 0.32
HERC2-204ENST00000563945 CST4P01036 141 aa17.07■□□□□ 0.32
HERC2-204ENST00000563945 OPN1MWP04001 364 aa17.07■□□□□ 0.32
HERC2-204ENST00000563945 ACAA1P09110 424 aaPredicted RBP17.07■□□□□ 0.32
HERC2-204ENST00000563945 OPN1MW2P0DN77 364 aa17.07■□□□□ 0.32
HERC2-204ENST00000563945 OPN1MW3P0DN78 364 aa17.07■□□□□ 0.32
HERC2-204ENST00000563945 PAICSP22234 425 aaKnown RBP17.07■□□□□ 0.32
HERC2-204ENST00000563945 KIR2DS4P43632 304 aa17.07■□□□□ 0.32
HERC2-204ENST00000563945 CAPZA1P52907 286 aa17.07■□□□□ 0.32
HERC2-204ENST00000563945 DGUOKQ16854 277 aa17.07■□□□□ 0.32
HERC2-204ENST00000563945 KLHL12Q53G59 568 aa17.07■□□□□ 0.32
HERC2-204ENST00000563945 C16orf89Q6UX73 402 aa17.07■□□□□ 0.32
HERC2-204ENST00000563945 PRSS45Q7RTY3 260 aa17.07■□□□□ 0.32
HERC2-204ENST00000563945 ZDHHC23Q8IYP9 409 aa17.07■□□□□ 0.32
HERC2-204ENST00000563945 FAM185AQ8N0U4 392 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms