RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 ECM29Q5VYK3 1845 aa3.28□□□□□ -1.88
MARK3-220ENST00000560417 PAPPA2Q9BXP8 1791 aa3.28□□□□□ -1.89
MARK3-220ENST00000560417 ZNF609O15014 1411 aa3.27□□□□□ -1.89
MARK3-220ENST00000560417 IGHV1OR15-9A0A0B4J2B8 117 aa3.27□□□□□ -1.89
MARK3-220ENST00000560417 LRCOL1A6NCL2 159 aa3.27□□□□□ -1.89
MARK3-220ENST00000560417 BPY2O14599 106 aa3.27□□□□□ -1.89
MARK3-220ENST00000560417 RAD51BO15315 384 aa3.27□□□□□ -1.89
MARK3-220ENST00000560417 NVLO15381 856 aaKnown RBP3.27□□□□□ -1.89
MARK3-220ENST00000560417 SEMA3DO95025 777 aa3.27□□□□□ -1.89
MARK3-220ENST00000560417 PGA5P0DJD9 388 aa3.27□□□□□ -1.89
MARK3-220ENST00000560417 TUBG1P23258 451 aa3.27□□□□□ -1.89
MARK3-220ENST00000560417 IL32P24001 234 aa3.27□□□□□ -1.89
MARK3-220ENST00000560417 C5orf47Q569G3 176 aa3.27□□□□□ -1.89
MARK3-220ENST00000560417 GCSAMLQ5JQS6 135 aa3.27□□□□□ -1.89
MARK3-220ENST00000560417 KHDRBS2Q5VWX1 349 aaKnown RBP3.27□□□□□ -1.89
MARK3-220ENST00000560417 CST9Q5W186 159 aa3.27□□□□□ -1.89
MARK3-220ENST00000560417 HORMAD1Q86X24 394 aa3.27□□□□□ -1.89
MARK3-220ENST00000560417 CDKL3Q8IVW4 592 aaPredicted RBP3.27□□□□□ -1.89
MARK3-220ENST00000560417 OR5AR1Q8NGP9 310 aa3.27□□□□□ -1.89
MARK3-220ENST00000560417 OR51F2Q8NH61 342 aa3.27□□□□□ -1.89
MARK3-220ENST00000560417 FRZBQ92765 325 aa3.27□□□□□ -1.89
MARK3-220ENST00000560417 PTX4Q96A99 478 aa3.27□□□□□ -1.89
MARK3-220ENST00000560417 ISG20Q96AZ6 181 aaKnown RBP3.27□□□□□ -1.89
MARK3-220ENST00000560417 NARS2Q96I59 477 aaKnown RBP3.27□□□□□ -1.89
MARK3-220ENST00000560417 C9orf72Q96LT7 481 aa3.27□□□□□ -1.89
MARK3-220ENST00000560417 OR52D1Q9H346 318 aa3.27□□□□□ -1.89
MARK3-220ENST00000560417 C8orf33Q9H7E9 229 aaPredicted RBP3.27□□□□□ -1.89
MARK3-220ENST00000560417 CD209Q9NNX6 404 aa3.27□□□□□ -1.89
MARK3-220ENST00000560417 MED4Q9NPJ6 270 aa3.27□□□□□ -1.89
MARK3-220ENST00000560417 PXMP2Q9NR77 195 aa3.27□□□□□ -1.89
MARK3-220ENST00000560417 TUBG2Q9NRH3 451 aa3.27□□□□□ -1.89
MARK3-220ENST00000560417 SLC39A1Q9NY26 324 aa3.27□□□□□ -1.89
MARK3-220ENST00000560417 SLC17A7Q9P2U7 560 aa3.27□□□□□ -1.89
MARK3-220ENST00000560417 YARS2Q9Y2Z4 477 aaKnown RBP3.27□□□□□ -1.89
MARK3-220ENST00000560417 AKAP11Q9UKA4 1901 aa3.27□□□□□ -1.89
MARK3-220ENST00000560417 MKI67P46013 3256 aaKnown RBP3.26□□□□□ -1.89
MARK3-220ENST00000560417 IGLV4-60A0A075B6I1 120 aa3.26□□□□□ -1.89
MARK3-220ENST00000560417 IGHV3OR16-9A0A0B4J2B5 98 aa3.26□□□□□ -1.89
MARK3-220ENST00000560417 PDZK1P1A8MUH7 402 aa3.26□□□□□ -1.89
MARK3-220ENST00000560417 ZNF99A8MXY4 864 aaPredicted RBP3.26□□□□□ -1.89
MARK3-220ENST00000560417 GABRPO00591 440 aa3.26□□□□□ -1.89
MARK3-220ENST00000560417 SIVA1O15304 175 aa3.26□□□□□ -1.89
MARK3-220ENST00000560417 B4GALT5O43286 388 aa3.26□□□□□ -1.89
MARK3-220ENST00000560417 APCSP02743 223 aa3.26□□□□□ -1.89
MARK3-220ENST00000560417 PGA4P0DJD7 388 aa3.26□□□□□ -1.89
MARK3-220ENST00000560417 PGA3P0DJD8 388 aa3.26□□□□□ -1.89
MARK3-220ENST00000560417 CD82P27701 267 aa3.26□□□□□ -1.89
MARK3-220ENST00000560417 SLC11A1P49279 550 aa3.26□□□□□ -1.89
MARK3-220ENST00000560417 SERPINB8P50452 374 aa3.26□□□□□ -1.89
MARK3-220ENST00000560417 CDKN2DP55273 166 aa3.26□□□□□ -1.89
MARK3-220ENST00000560417 RAB11AP62491 216 aa3.26□□□□□ -1.89
MARK3-220ENST00000560417 ART3Q13508 389 aa3.26□□□□□ -1.89
MARK3-220ENST00000560417 DGCR6Q14129 220 aa3.26□□□□□ -1.89
MARK3-220ENST00000560417 RAB11BQ15907 218 aa3.26□□□□□ -1.89
MARK3-220ENST00000560417 KLHL40Q2TBA0 621 aa3.26□□□□□ -1.89
MARK3-220ENST00000560417 SMUG1Q53HV7 270 aa3.26□□□□□ -1.89
MARK3-220ENST00000560417 TCEAL5Q5H9L2 206 aa3.26□□□□□ -1.89
MARK3-220ENST00000560417 ZNF684Q5T5D7 378 aa3.26□□□□□ -1.89
MARK3-220ENST00000560417 OR2L8Q8NGY9 312 aa3.26□□□□□ -1.89
MARK3-220ENST00000560417 TCEAL3Q969E4 200 aa3.26□□□□□ -1.89
MARK3-220ENST00000560417 FLYWCH2Q96CP2 140 aaKnown RBP3.26□□□□□ -1.89
MARK3-220ENST00000560417 NEURL3Q96EH8 262 aa3.26□□□□□ -1.89
MARK3-220ENST00000560417 BTN2A3PQ96KV6 586 aa3.26□□□□□ -1.89
MARK3-220ENST00000560417 RFNGQ9Y644 331 aa3.26□□□□□ -1.89
MARK3-220ENST00000560417 CDK5RAP2Q96SN8 1893 aa3.26□□□□□ -1.89
MARK3-220ENST00000560417 ZSWIM8A7E2V4 1837 aa3.26□□□□□ -1.89
MARK3-220ENST00000560417 SIPA1L1O43166 1804 aa3.26□□□□□ -1.89
MARK3-220ENST00000560417 MAST2Q6P0Q8 1798 aa3.25□□□□□ -1.89
MARK3-220ENST00000560417 MROH5Q6ZUA9 1318 aa3.25□□□□□ -1.89
MARK3-220ENST00000560417 IGKV2-28A0A075B6P5 120 aa3.25□□□□□ -1.89
MARK3-220ENST00000560417 TMEM120BA0PK00 339 aa3.25□□□□□ -1.89
MARK3-220ENST00000560417 PLPP1O14494 284 aa3.25□□□□□ -1.89
MARK3-220ENST00000560417 BET1O15155 118 aa3.25□□□□□ -1.89
MARK3-220ENST00000560417 RBFOX2O43251 390 aaKnown RBP eCLIP3.25□□□□□ -1.89
MARK3-220ENST00000560417 REM1O75628 298 aa3.25□□□□□ -1.89
MARK3-220ENST00000560417 IGKV2D-28P01615 120 aa3.25□□□□□ -1.89
MARK3-220ENST00000560417 RHOXF2BP0C7M4 288 aa3.25□□□□□ -1.89
MARK3-220ENST00000560417 PFN2P35080 140 aa3.25□□□□□ -1.89
MARK3-220ENST00000560417 RBM34P42696 430 aaKnown RBP3.25□□□□□ -1.89
MARK3-220ENST00000560417 GFERP55789 205 aa3.25□□□□□ -1.89
MARK3-220ENST00000560417 ZNF266Q14584 549 aa3.25□□□□□ -1.89
MARK3-220ENST00000560417 HIKESHIQ53FT3 197 aa3.25□□□□□ -1.89
MARK3-220ENST00000560417 FBXW9Q5XUX1 488 aa3.25□□□□□ -1.89
MARK3-220ENST00000560417 WDR82Q6UXN9 313 aa3.25□□□□□ -1.89
MARK3-220ENST00000560417 USP50Q70EL3 339 aaPredicted RBP3.25□□□□□ -1.89
MARK3-220ENST00000560417 SLC16A13Q7RTY0 426 aa3.25□□□□□ -1.89
MARK3-220ENST00000560417 CALHM1Q8IU99 346 aa3.25□□□□□ -1.89
MARK3-220ENST00000560417 VKORC1L1Q8N0U8 176 aa3.25□□□□□ -1.89
MARK3-220ENST00000560417 SNX31Q8N9S9 440 aa3.25□□□□□ -1.89
MARK3-220ENST00000560417 OR4K5Q8NGD3 323 aa3.25□□□□□ -1.89
MARK3-220ENST00000560417 OR10W1Q8NGF6 305 aa3.25□□□□□ -1.89
MARK3-220ENST00000560417 ZNF707Q96C28 371 aaPredicted RBP3.25□□□□□ -1.89
MARK3-220ENST00000560417 ZBED3Q96IU2 234 aaPredicted RBP3.25□□□□□ -1.89
MARK3-220ENST00000560417 NAP1L5Q96NT1 182 aaPredicted RBP3.25□□□□□ -1.89
MARK3-220ENST00000560417 ZNF382Q96SR6 550 aa3.25□□□□□ -1.89
MARK3-220ENST00000560417 CALN1Q9BXU9 219 aa3.25□□□□□ -1.89
MARK3-220ENST00000560417 COA1Q9GZY4 146 aa3.25□□□□□ -1.89
MARK3-220ENST00000560417 RHBDD3Q9Y3P4 386 aa3.25□□□□□ -1.89
MARK3-220ENST00000560417 HYOU1Q9Y4L1 999 aa3.25□□□□□ -1.89
MARK3-220ENST00000560417 DOCK2Q92608 1830 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms