RNA–Protein interactions for RNA: ENST00000557348.5

SHMT2-229, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,659 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-229ENST00000557348 MRPS24Q96EL2 167 aaKnown RBP11.11□□□□□ -0.63
SHMT2-229ENST00000557348 FOXB1Q99853 325 aa11.11□□□□□ -0.63
SHMT2-229ENST00000557348 ARL6Q9H0F7 186 aa11.11□□□□□ -0.63
SHMT2-229ENST00000557348 EXO5Q9H790 373 aa11.11□□□□□ -0.63
SHMT2-229ENST00000557348 ZDHHC11Q9H8X9 412 aa11.11□□□□□ -0.63
SHMT2-229ENST00000557348 CRLF2Q9HC73 371 aa11.11□□□□□ -0.63
SHMT2-229ENST00000557348 RASL12Q9NYN1 266 aa11.11□□□□□ -0.63
SHMT2-229ENST00000557348 PLEK2Q9NYT0 353 aa11.11□□□□□ -0.63
SHMT2-229ENST00000557348 COQ3Q9NZJ6 369 aa11.11□□□□□ -0.63
SHMT2-229ENST00000557348 ZNF107Q9UII5 783 aaPredicted RBP11.11□□□□□ -0.63
SHMT2-229ENST00000557348 TIMM10BQ9Y5J6 103 aa11.11□□□□□ -0.63
SHMT2-229ENST00000557348 SPTBN4Q9H254 2564 aa11.1□□□□□ -0.63
SHMT2-229ENST00000557348 EML6Q6ZMW3 1958 aa11.1□□□□□ -0.63
SHMT2-229ENST00000557348 TRGV5A0A0B4J1U4 118 aa11.1□□□□□ -0.63
SHMT2-229ENST00000557348 A0A0B4J203 849 aa11.1□□□□□ -0.63
SHMT2-229ENST00000557348 RPL36A-HNRNPH2H7BZ11 118 aa11.1□□□□□ -0.63
SHMT2-229ENST00000557348 XRCC3O43542 346 aa11.1□□□□□ -0.63
SHMT2-229ENST00000557348 SGCEO43556 437 aa11.1□□□□□ -0.63
SHMT2-229ENST00000557348 OR2F2O95006 317 aa11.1□□□□□ -0.63
SHMT2-229ENST00000557348 CSF1P09603 554 aa11.1□□□□□ -0.63
SHMT2-229ENST00000557348 RAB6AP20340 208 aa11.1□□□□□ -0.63
SHMT2-229ENST00000557348 VEGFCP49767 419 aa11.1□□□□□ -0.63
SHMT2-229ENST00000557348 PRKXP51817 358 aa11.1□□□□□ -0.63
SHMT2-229ENST00000557348 OR2F1Q13607 317 aa11.1□□□□□ -0.63
SHMT2-229ENST00000557348 ATP1A1-AS1Q5TC04 95 aa11.1□□□□□ -0.63
SHMT2-229ENST00000557348 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.1□□□□□ -0.63
SHMT2-229ENST00000557348 DPPA2Q7Z7J5 298 aa11.1□□□□□ -0.63
SHMT2-229ENST00000557348 COMMD2Q86X83 199 aa11.1□□□□□ -0.63
SHMT2-229ENST00000557348 SPAG16Q8N0X2 631 aa11.1□□□□□ -0.63
SHMT2-229ENST00000557348 SLC22A24Q8N4F4 322 aa11.1□□□□□ -0.63
SHMT2-229ENST00000557348 OR8B12Q8NGG6 310 aa11.1□□□□□ -0.63
SHMT2-229ENST00000557348 PGAM5Q96HS1 289 aa11.1□□□□□ -0.63
SHMT2-229ENST00000557348 OR10A2Q9H208 303 aa11.1□□□□□ -0.63
SHMT2-229ENST00000557348 GPR35Q9HC97 309 aa11.1□□□□□ -0.63
SHMT2-229ENST00000557348 CLEC4AQ9UMR7 237 aa11.1□□□□□ -0.63
SHMT2-229ENST00000557348 MRPS7Q9Y2R9 242 aaKnown RBP11.1□□□□□ -0.63
SHMT2-229ENST00000557348 FRYLO94915 3013 aa11.1□□□□□ -0.63
SHMT2-229ENST00000557348 DOCK10Q96BY6 2186 aa11.09□□□□□ -0.63
SHMT2-229ENST00000557348 ZNF587BE7ETH6 402 aa11.09□□□□□ -0.63
SHMT2-229ENST00000557348 M0R135 149 aa11.09□□□□□ -0.63
SHMT2-229ENST00000557348 ARPC1BO15143 372 aaKnown RBP11.09□□□□□ -0.63
SHMT2-229ENST00000557348 NKX2-8O15522 239 aa11.09□□□□□ -0.63
SHMT2-229ENST00000557348 ITGB2P05107 769 aa11.09□□□□□ -0.63
SHMT2-229ENST00000557348 S100A8P05109 93 aa11.09□□□□□ -0.63
SHMT2-229ENST00000557348 HEXAP06865 529 aa11.09□□□□□ -0.63
SHMT2-229ENST00000557348 CELA3AP09093 270 aa11.09□□□□□ -0.63
SHMT2-229ENST00000557348 PAX6P26367 422 aa11.09□□□□□ -0.63
SHMT2-229ENST00000557348 MPGP29372 298 aa11.09□□□□□ -0.63
SHMT2-229ENST00000557348 POU3F4P49335 361 aa11.09□□□□□ -0.63
SHMT2-229ENST00000557348 RAB13P51153 203 aa11.09□□□□□ -0.63
SHMT2-229ENST00000557348 ZNF660Q6AZW8 331 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-229ENST00000557348 RAB12Q6IQ22 244 aa11.09□□□□□ -0.63
SHMT2-229ENST00000557348 ZNF529Q6P280 563 aa11.09□□□□□ -0.63
SHMT2-229ENST00000557348 Q6ZSR3 168 aa11.09□□□□□ -0.63
SHMT2-229ENST00000557348 Q6ZTK2 550 aa11.09□□□□□ -0.63
SHMT2-229ENST00000557348 ZNF627Q7L945 461 aa11.09□□□□□ -0.63
SHMT2-229ENST00000557348 ADGRE4PQ86SQ3 457 aa11.09□□□□□ -0.63
SHMT2-229ENST00000557348 COQ8AQ8NI60 647 aa11.09□□□□□ -0.63
SHMT2-229ENST00000557348 OR51E1Q8TCB6 317 aa11.09□□□□□ -0.63
SHMT2-229ENST00000557348 ABHD3Q8WU67 409 aa11.09□□□□□ -0.63
SHMT2-229ENST00000557348 PP6455Q8WZ26 134 aa11.09□□□□□ -0.63
SHMT2-229ENST00000557348 PPP1R14AQ96A00 147 aa11.09□□□□□ -0.63
SHMT2-229ENST00000557348 FGGYQ96C11 551 aa11.09□□□□□ -0.63
SHMT2-229ENST00000557348 CPNE2Q96FN4 548 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-229ENST00000557348 ZNF799Q96GE5 643 aa11.09□□□□□ -0.63
SHMT2-229ENST00000557348 ZNF845Q96IR2 970 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-229ENST00000557348 CXorf58Q96LI9 332 aa11.09□□□□□ -0.63
SHMT2-229ENST00000557348 PDCD10Q9BUL8 212 aa11.09□□□□□ -0.63
SHMT2-229ENST00000557348 RGCCQ9H4X1 137 aa11.09□□□□□ -0.63
SHMT2-229ENST00000557348 GLRX2Q9NS18 164 aa11.09□□□□□ -0.63
SHMT2-229ENST00000557348 ZNF69Q9UC07 566 aa11.09□□□□□ -0.63
SHMT2-229ENST00000557348 MLXQ9UH92 298 aa11.09□□□□□ -0.63
SHMT2-229ENST00000557348 A0A1B0GTI1 187 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 OR6C6A6NF89 314 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 CEACAM4O75871 244 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 TOXO94900 526 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 BPNT1O95861 308 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 APOC3P02656 99 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 ITGA5P08648 1049 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 SLC25A4P12235 298 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 CDK2P24941 298 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 RFC3P40938 356 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 SLC6A9P48067 706 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 CCL11P51671 97 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 SRYQ05066 204 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 CLN3Q13286 438 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 MADCAM1Q13477 382 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 CEACAM16Q2WEN9 425 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 GLYATL3Q5SZD4 288 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 ZNF813Q6ZN06 617 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 FAM57BQ71RH2 274 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 LRRC18Q8N456 261 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 PLPP7Q8NBV4 271 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 BEST4Q8NFU0 473 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 OR2AK2Q8NG84 335 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 OR1J2Q8NGS2 313 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 APH1AQ96BI3 265 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 LRRC46Q96FV0 321 aa11.08□□□□□ -0.64
SHMT2-229ENST00000557348 ALKBH3Q96Q83 286 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-229ENST00000557348 TCEAL7Q9BRU2 100 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms