RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 ZNF319Q9P2F9 582 aa12.78□□□□□ -0.36
SNX6-205ENST00000555648 ONECUT1Q9UBC0 465 aa12.78□□□□□ -0.36
SNX6-205ENST00000555648 RPUSD1Q9UJJ7 312 aaKnown RBP12.78□□□□□ -0.36
SNX6-205ENST00000555648 IGHV1-69DA0A0B4J2H0 117 aa12.77□□□□□ -0.37
SNX6-205ENST00000555648 CENPVL3A0A0U1RRI6 287 aa12.77□□□□□ -0.37
SNX6-205ENST00000555648 A0A1B0GVI7 797 aa12.77□□□□□ -0.37
SNX6-205ENST00000555648 GPR37O15354 613 aa12.77□□□□□ -0.37
SNX6-205ENST00000555648 GSC2O15499 205 aa12.77□□□□□ -0.37
SNX6-205ENST00000555648 DNAJC8O75937 253 aaPredicted RBP12.77□□□□□ -0.37
SNX6-205ENST00000555648 CST4P01036 141 aa12.77□□□□□ -0.37
SNX6-205ENST00000555648 IGHV1-69P01742 117 aa12.77□□□□□ -0.37
SNX6-205ENST00000555648 TMEM236Q5W0B7 351 aa12.77□□□□□ -0.37
SNX6-205ENST00000555648 FIP1L1Q6UN15 594 aaKnown RBP12.77□□□□□ -0.37
SNX6-205ENST00000555648 Q6YL49 198 aa12.77□□□□□ -0.37
SNX6-205ENST00000555648 THAP5Q7Z6K1 395 aa12.77□□□□□ -0.37
SNX6-205ENST00000555648 C11orf53Q8IXP5 236 aa12.77□□□□□ -0.37
SNX6-205ENST00000555648 BBS1Q8NFJ9 593 aa12.77□□□□□ -0.37
SNX6-205ENST00000555648 OR10Z1Q8NGY1 313 aa12.77□□□□□ -0.37
SNX6-205ENST00000555648 OR4F5Q8NH21 305 aa12.77□□□□□ -0.37
SNX6-205ENST00000555648 SSMEM1Q8WWF3 244 aa12.77□□□□□ -0.37
SNX6-205ENST00000555648 H1FXQ92522 213 aaKnown RBP12.77□□□□□ -0.37
SNX6-205ENST00000555648 RPL3LQ92901 407 aaKnown RBP12.77□□□□□ -0.37
SNX6-205ENST00000555648 ITPKCQ96DU7 683 aa12.77□□□□□ -0.37
SNX6-205ENST00000555648 PKP2Q99959 881 aa12.77□□□□□ -0.37
SNX6-205ENST00000555648 YIPF3Q9GZM5 350 aa12.77□□□□□ -0.37
SNX6-205ENST00000555648 SLC25A19Q9HC21 320 aa12.77□□□□□ -0.37
SNX6-205ENST00000555648 H2AFY2Q9P0M6 372 aaPredicted RBP12.77□□□□□ -0.37
SNX6-205ENST00000555648 CAB39Q9Y376 341 aaPredicted RBP12.77□□□□□ -0.37
SNX6-205ENST00000555648 FAM96BQ9Y3D0 163 aa12.77□□□□□ -0.37
SNX6-205ENST00000555648 LRP12Q9Y561 859 aa12.77□□□□□ -0.37
SNX6-205ENST00000555648 KPTNQ9Y664 436 aa12.77□□□□□ -0.37
SNX6-205ENST00000555648 TMEM14AQ9Y6G1 99 aa12.77□□□□□ -0.37
SNX6-205ENST00000555648 ZNF816-ZNF321PA0A0X1KG74 233 aa12.76□□□□□ -0.37
SNX6-205ENST00000555648 A0A1B0GUS0 222 aa12.76□□□□□ -0.37
SNX6-205ENST00000555648 TMEM269A0A1B0GVZ9 245 aa12.76□□□□□ -0.37
SNX6-205ENST00000555648 FAM181BA6NEQ2 426 aa12.76□□□□□ -0.37
SNX6-205ENST00000555648 ACOD1A6NK06 481 aa12.76□□□□□ -0.37
SNX6-205ENST00000555648 MMP9P14780 707 aa12.76□□□□□ -0.37
SNX6-205ENST00000555648 ALOX5APP20292 161 aa12.76□□□□□ -0.37
SNX6-205ENST00000555648 OMGP23515 440 aa12.76□□□□□ -0.37
SNX6-205ENST00000555648 MAP2K3P46734 347 aa12.76□□□□□ -0.37
SNX6-205ENST00000555648 CDONQ4KMG0 1287 aa12.76□□□□□ -0.37
SNX6-205ENST00000555648 C17orf107Q6ZR85 190 aa12.76□□□□□ -0.37
SNX6-205ENST00000555648 PDZD9Q8IXQ8 264 aa12.76□□□□□ -0.37
SNX6-205ENST00000555648 TMEM86BQ8N661 226 aa12.76□□□□□ -0.37
SNX6-205ENST00000555648 FAM216BQ8N7L0 139 aa12.76□□□□□ -0.37
SNX6-205ENST00000555648 OR5T2Q8NGG2 359 aa12.76□□□□□ -0.37
SNX6-205ENST00000555648 OR8B12Q8NGG6 310 aa12.76□□□□□ -0.37
SNX6-205ENST00000555648 OR5P3Q8WZ94 311 aa12.76□□□□□ -0.37
SNX6-205ENST00000555648 NRBF2Q96F24 287 aa12.76□□□□□ -0.37
SNX6-205ENST00000555648 MED30Q96HR3 178 aa12.76□□□□□ -0.37
SNX6-205ENST00000555648 SIRPDQ9H106 197 aa12.76□□□□□ -0.37
SNX6-205ENST00000555648 TLNRD1Q9H1K6 362 aa12.76□□□□□ -0.37
SNX6-205ENST00000555648 PRDM13Q9H4Q3 707 aa12.76□□□□□ -0.37
SNX6-205ENST00000555648 PPP1R3EQ9H7J1 279 aa12.76□□□□□ -0.37
SNX6-205ENST00000555648 BEX1Q9HBH7 125 aa12.76□□□□□ -0.37
SNX6-205ENST00000555648 SNTG1Q9NSN8 517 aa12.76□□□□□ -0.37
SNX6-205ENST00000555648 HAO2Q9NYQ3 351 aa12.76□□□□□ -0.37
SNX6-205ENST00000555648 IKZF2Q9UKS7 526 aa12.76□□□□□ -0.37
SNX6-205ENST00000555648 POMPQ9Y244 141 aa12.76□□□□□ -0.37
SNX6-205ENST00000555648 POMT1Q9Y6A1 747 aa12.76□□□□□ -0.37
SNX6-205ENST00000555648 TCRBV3S1A0A5B6 114 aa12.75□□□□□ -0.37
SNX6-205ENST00000555648 BTBD17A6NE02 478 aa12.75□□□□□ -0.37
SNX6-205ENST00000555648 KNG1P01042 644 aa12.75□□□□□ -0.37
SNX6-205ENST00000555648 MRPL3P09001 348 aaKnown RBP12.75□□□□□ -0.37
SNX6-205ENST00000555648 MDKP21741 143 aaPredicted RBP12.75□□□□□ -0.37
SNX6-205ENST00000555648 EEF1B2P24534 225 aaKnown RBP12.75□□□□□ -0.37
SNX6-205ENST00000555648 ACKR3P25106 362 aa12.75□□□□□ -0.37
SNX6-205ENST00000555648 CRISP1P54107 249 aa12.75□□□□□ -0.37
SNX6-205ENST00000555648 ACTR3P61158 418 aa12.75□□□□□ -0.37
SNX6-205ENST00000555648 ZNF829Q3KNS6 432 aaPredicted RBP12.75□□□□□ -0.37
SNX6-205ENST00000555648 DEGS2Q6QHC5 323 aa12.75□□□□□ -0.37
SNX6-205ENST00000555648 VMO1Q7Z5L0 202 aa12.75□□□□□ -0.37
SNX6-205ENST00000555648 ASB17Q8WXJ9 295 aa12.75□□□□□ -0.37
SNX6-205ENST00000555648 ITFG2Q969R8 447 aa12.75□□□□□ -0.37
SNX6-205ENST00000555648 SEH1LQ96EE3 360 aa12.75□□□□□ -0.37
SNX6-205ENST00000555648 TEAD3Q99594 435 aa12.75□□□□□ -0.37
SNX6-205ENST00000555648 DNTTIP1Q9H147 329 aa12.75□□□□□ -0.37
SNX6-205ENST00000555648 ZNF696Q9H7X3 374 aa12.75□□□□□ -0.37
SNX6-205ENST00000555648 GTF2A1LQ9UNN4 478 aa12.75□□□□□ -0.37
SNX6-205ENST00000555648 KLHDC2Q9Y2U9 406 aa12.75□□□□□ -0.37
SNX6-205ENST00000555648 NBEAL1Q6ZS30 2694 aa12.75□□□□□ -0.37
SNX6-205ENST00000555648 PSMD9O00233 223 aa12.74□□□□□ -0.37
SNX6-205ENST00000555648 AKR7A2O43488 359 aa12.74□□□□□ -0.37
SNX6-205ENST00000555648 ZNF254O75437 659 aa12.74□□□□□ -0.37
SNX6-205ENST00000555648 MELTFP08582 738 aa12.74□□□□□ -0.37
SNX6-205ENST00000555648 ATP6V1B1P15313 513 aa12.74□□□□□ -0.37
SNX6-205ENST00000555648 NDUFB7P17568 137 aa12.74□□□□□ -0.37
SNX6-205ENST00000555648 GLRA1P23415 457 aa12.74□□□□□ -0.37
SNX6-205ENST00000555648 GABRA2P47869 451 aa12.74□□□□□ -0.37
SNX6-205ENST00000555648 GPM6AP51674 278 aa12.74□□□□□ -0.37
SNX6-205ENST00000555648 RIDAP52758 137 aaKnown RBP12.74□□□□□ -0.37
SNX6-205ENST00000555648 HCCSP53701 268 aa12.74□□□□□ -0.37
SNX6-205ENST00000555648 RAG2P55895 527 aa12.74□□□□□ -0.37
SNX6-205ENST00000555648 GNG3P63215 75 aa12.74□□□□□ -0.37
SNX6-205ENST00000555648 GUCA2AQ02747 115 aa12.74□□□□□ -0.37
SNX6-205ENST00000555648 RIPPLY1Q0D2K3 151 aa12.74□□□□□ -0.37
SNX6-205ENST00000555648 BLMHQ13867 455 aa12.74□□□□□ -0.37
SNX6-205ENST00000555648 PRR31Q5SQ13 230 aa12.74□□□□□ -0.37
SNX6-205ENST00000555648 ZNF671Q8TAW3 534 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms