RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 NDUFS7O75251 213 aa12.12□□□□□ -0.47
CHD8-208ENST00000555301 HPXP02790 462 aa12.12□□□□□ -0.47
CHD8-208ENST00000555301 PSMA1P25786 263 aaKnown RBP12.12□□□□□ -0.47
CHD8-208ENST00000555301 PSMB9P28065 219 aa12.12□□□□□ -0.47
CHD8-208ENST00000555301 TRAM1Q15629 374 aa12.12□□□□□ -0.47
CHD8-208ENST00000555301 CEACAM21Q3KPI0 293 aa12.12□□□□□ -0.47
CHD8-208ENST00000555301 Q499Y3 187 aa12.12□□□□□ -0.47
CHD8-208ENST00000555301 PLCXD3Q63HM9 321 aa12.12□□□□□ -0.47
CHD8-208ENST00000555301 MOB3CQ70IA8 216 aa12.12□□□□□ -0.47
CHD8-208ENST00000555301 UTS2BQ765I0 119 aa12.12□□□□□ -0.47
CHD8-208ENST00000555301 SERPINA12Q8IW75 414 aa12.12□□□□□ -0.47
CHD8-208ENST00000555301 PHC2Q8IXK0 858 aa12.12□□□□□ -0.47
CHD8-208ENST00000555301 PARP16Q8N5Y8 322 aa12.12□□□□□ -0.47
CHD8-208ENST00000555301 OR5A2Q8NGI9 324 aa12.12□□□□□ -0.47
CHD8-208ENST00000555301 OR5D14Q8NGL3 314 aa12.12□□□□□ -0.47
CHD8-208ENST00000555301 UBASH3BQ8TF42 649 aa12.12□□□□□ -0.47
CHD8-208ENST00000555301 OR5P3Q8WZ94 311 aa12.12□□□□□ -0.47
CHD8-208ENST00000555301 ERGIC1Q969X5 290 aa12.12□□□□□ -0.47
CHD8-208ENST00000555301 ADAT3Q96EY9 351 aaPredicted RBP12.12□□□□□ -0.47
CHD8-208ENST00000555301 MEGF10Q96KG7 1140 aa12.12□□□□□ -0.47
CHD8-208ENST00000555301 FOXC2Q99958 501 aa12.12□□□□□ -0.47
CHD8-208ENST00000555301 CENPEQ02224 2701 aa12.11□□□□□ -0.47
CHD8-208ENST00000555301 A6NIN4 97 aa12.11□□□□□ -0.47
CHD8-208ENST00000555301 OR5B21A6NL26 309 aa12.11□□□□□ -0.47
CHD8-208ENST00000555301 TMEM210A6NLX4 147 aa12.11□□□□□ -0.47
CHD8-208ENST00000555301 NCR1O76036 304 aa12.11□□□□□ -0.47
CHD8-208ENST00000555301 PTBP3O95758 552 aaKnown RBP12.11□□□□□ -0.47
CHD8-208ENST00000555301 DAOP14920 347 aa12.11□□□□□ -0.47
CHD8-208ENST00000555301 MAPK3P27361 379 aaPredicted RBP12.11□□□□□ -0.47
CHD8-208ENST00000555301 CRYBB2P43320 205 aa12.11□□□□□ -0.47
CHD8-208ENST00000555301 SOX2P48431 317 aa12.11□□□□□ -0.47
CHD8-208ENST00000555301 RPS11P62280 158 aaKnown RBP eCLIP12.11□□□□□ -0.47
CHD8-208ENST00000555301 MAB21L1Q13394 359 aa12.11□□□□□ -0.47
CHD8-208ENST00000555301 CNN3Q15417 329 aaKnown RBP12.11□□□□□ -0.47
CHD8-208ENST00000555301 CEP78Q5JTW2 689 aa12.11□□□□□ -0.47
CHD8-208ENST00000555301 SYT6Q5T7P8 510 aaPredicted RBP12.11□□□□□ -0.47
CHD8-208ENST00000555301 ITLN1Q8WWA0 313 aa12.11□□□□□ -0.47
CHD8-208ENST00000555301 RDH5Q92781 318 aa12.11□□□□□ -0.47
CHD8-208ENST00000555301 DVL3Q92997 716 aaPredicted RBP12.11□□□□□ -0.47
CHD8-208ENST00000555301 TMEM106AQ96A25 262 aa12.11□□□□□ -0.47
CHD8-208ENST00000555301 RNF170Q96K19 258 aa12.11□□□□□ -0.47
CHD8-208ENST00000555301 TMED9Q9BVK6 235 aa12.11□□□□□ -0.47
CHD8-208ENST00000555301 NEK6Q9HC98 313 aa12.11□□□□□ -0.47
CHD8-208ENST00000555301 DLL4Q9NR61 685 aa12.11□□□□□ -0.47
CHD8-208ENST00000555301 GPR173Q9NS66 373 aa12.11□□□□□ -0.47
CHD8-208ENST00000555301 SLC7A11Q9UPY5 501 aa12.11□□□□□ -0.47
CHD8-208ENST00000555301 IGHV1-69-2A0A0G2JMI3 117 aa12.1□□□□□ -0.47
CHD8-208ENST00000555301 MAGEA13PA6NCF6 341 aa12.1□□□□□ -0.47
CHD8-208ENST00000555301 TRIM64CA6NLI5 447 aa12.1□□□□□ -0.47
CHD8-208ENST00000555301 ZNF879B4DU55 563 aa12.1□□□□□ -0.47
CHD8-208ENST00000555301 IFNL4K9M1U5 179 aa12.1□□□□□ -0.47
CHD8-208ENST00000555301 CCRL2O00421 344 aa12.1□□□□□ -0.47
CHD8-208ENST00000555301 SSX4O60224 188 aa12.1□□□□□ -0.47
CHD8-208ENST00000555301 INMTO95050 263 aa12.1□□□□□ -0.47
CHD8-208ENST00000555301 CSF3P09919 207 aa12.1□□□□□ -0.47
CHD8-208ENST00000555301 OCMP0CE72 109 aaPredicted RBP12.1□□□□□ -0.47
CHD8-208ENST00000555301 GABRA5P31644 462 aa12.1□□□□□ -0.47
CHD8-208ENST00000555301 GATA4P43694 442 aa12.1□□□□□ -0.47
CHD8-208ENST00000555301 DSCR9P59020 149 aa12.1□□□□□ -0.47
CHD8-208ENST00000555301 GNG3P63215 75 aa12.1□□□□□ -0.47
CHD8-208ENST00000555301 NEDD8Q15843 81 aa12.1□□□□□ -0.47
CHD8-208ENST00000555301 PRSS57Q6UWY2 283 aa12.1□□□□□ -0.47
CHD8-208ENST00000555301 OR13C5Q8NGS8 318 aa12.1□□□□□ -0.47
CHD8-208ENST00000555301 HPSE2Q8WWQ2 592 aa12.1□□□□□ -0.47
CHD8-208ENST00000555301 ZCCHC4Q9H5U6 513 aa12.1□□□□□ -0.47
CHD8-208ENST00000555301 PPP1R3EQ9H7J1 279 aa12.1□□□□□ -0.47
CHD8-208ENST00000555301 PPP1R3CQ9UQK1 317 aa12.1□□□□□ -0.47
CHD8-208ENST00000555301 FLNBO75369 2602 aaKnown RBP12.1□□□□□ -0.47
CHD8-208ENST00000555301 APCP25054 2843 aa12.09□□□□□ -0.47
CHD8-208ENST00000555301 LOC100289279A0A1B0GTE1 492 aa12.09□□□□□ -0.47
CHD8-208ENST00000555301 LY6HO94772 140 aa12.09□□□□□ -0.47
CHD8-208ENST00000555301 ALX3O95076 343 aa12.09□□□□□ -0.47
CHD8-208ENST00000555301 ATF1P18846 271 aa12.09□□□□□ -0.47
CHD8-208ENST00000555301 PRKACBP22694 351 aa12.09□□□□□ -0.47
CHD8-208ENST00000555301 UBE2V2Q15819 145 aa12.09□□□□□ -0.47
CHD8-208ENST00000555301 HFEQ30201 348 aa12.09□□□□□ -0.47
CHD8-208ENST00000555301 ACSM3Q53FZ2 586 aa12.09□□□□□ -0.47
CHD8-208ENST00000555301 FAM76BQ5HYJ3 339 aa12.09□□□□□ -0.47
CHD8-208ENST00000555301 SHEQ5VZ18 495 aa12.09□□□□□ -0.47
CHD8-208ENST00000555301 CLEC2AQ6UVW9 174 aa12.09□□□□□ -0.47
CHD8-208ENST00000555301 DNAAF1Q8NEP3 725 aa12.09□□□□□ -0.47
CHD8-208ENST00000555301 OR1M1Q8NGA1 313 aa12.09□□□□□ -0.47
CHD8-208ENST00000555301 OR13C9Q8NGT0 318 aa12.09□□□□□ -0.47
CHD8-208ENST00000555301 PHYHIPQ92561 330 aa12.09□□□□□ -0.47
CHD8-208ENST00000555301 TMEM203Q969S6 136 aa12.09□□□□□ -0.47
CHD8-208ENST00000555301 MUL1Q969V5 352 aa12.09□□□□□ -0.47
CHD8-208ENST00000555301 SPSB1Q96BD6 273 aa12.09□□□□□ -0.47
CHD8-208ENST00000555301 OR14A2Q96R54 314 aa12.09□□□□□ -0.47
CHD8-208ENST00000555301 FN3KRPQ9HA64 309 aa12.09□□□□□ -0.47
CHD8-208ENST00000555301 GCM1Q9NP62 436 aa12.09□□□□□ -0.47
CHD8-208ENST00000555301 NDUFB11Q9NX14 153 aa12.09□□□□□ -0.47
CHD8-208ENST00000555301 CKLFQ9UBR5 152 aa12.09□□□□□ -0.47
CHD8-208ENST00000555301 SF3B6Q9Y3B4 125 aaKnown RBP12.09□□□□□ -0.47
CHD8-208ENST00000555301 CSMD2Q7Z408 3487 aa12.09□□□□□ -0.47
CHD8-208ENST00000555301 ABCA12Q86UK0 2595 aa12.09□□□□□ -0.47
CHD8-208ENST00000555301 TRBV5-7A0A0A0MS05 114 aa12.08□□□□□ -0.48
CHD8-208ENST00000555301 LRRC30A6NM36 301 aa12.08□□□□□ -0.48
CHD8-208ENST00000555301 ZNF732B4DXR9 585 aa12.08□□□□□ -0.48
CHD8-208ENST00000555301 NDUFS8O00217 210 aa12.08□□□□□ -0.48
CHD8-208ENST00000555301 SULT1B1O43704 296 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms