RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 OR5T2Q8NGG2 359 aa18.95■□□□□ 0.62
SMARCD1-209ENST00000550477 FAM110DQ8TAY7 271 aaPredicted RBP18.95■□□□□ 0.62
SMARCD1-209ENST00000550477 TEX47Q8TBZ9 253 aa18.95■□□□□ 0.62
SMARCD1-209ENST00000550477 DGCR6LQ9BY27 220 aa18.95■□□□□ 0.62
SMARCD1-209ENST00000550477 METTL8Q9H825 291 aaKnown RBP18.95■□□□□ 0.62
SMARCD1-209ENST00000550477 CMC2Q9NRP2 79 aa18.95■□□□□ 0.62
SMARCD1-209ENST00000550477 ACTR3BQ9P1U1 418 aa18.95■□□□□ 0.62
SMARCD1-209ENST00000550477 SLC25A10Q9UBX3 287 aaPredicted RBP18.95■□□□□ 0.62
SMARCD1-209ENST00000550477 ZNF391Q9UJN7 358 aa18.95■□□□□ 0.62
SMARCD1-209ENST00000550477 RHBDD3Q9Y3P4 386 aa18.95■□□□□ 0.62
SMARCD1-209ENST00000550477 MEIOCA2RUB1 952 aa18.94■□□□□ 0.62
SMARCD1-209ENST00000550477 M0R1W7 72 aa18.94■□□□□ 0.62
SMARCD1-209ENST00000550477 SNX3O60493 162 aa18.94■□□□□ 0.62
SMARCD1-209ENST00000550477 CSF1P09603 554 aa18.94■□□□□ 0.62
SMARCD1-209ENST00000550477 CLUP10909 449 aa18.94■□□□□ 0.62
SMARCD1-209ENST00000550477 MNAT1P51948 309 aa18.94■□□□□ 0.62
SMARCD1-209ENST00000550477 UBE2E1P51965 193 aa18.94■□□□□ 0.62
SMARCD1-209ENST00000550477 GMFBP60983 142 aa18.94■□□□□ 0.62
SMARCD1-209ENST00000550477 MICAQ29983 383 aa18.94■□□□□ 0.62
SMARCD1-209ENST00000550477 STUMQ69YW2 141 aa18.94■□□□□ 0.62
SMARCD1-209ENST00000550477 Q6ZTK2 550 aa18.94■□□□□ 0.62
SMARCD1-209ENST00000550477 DEFB107AQ8IZN7 70 aa18.94■□□□□ 0.62
SMARCD1-209ENST00000550477 ITPKCQ96DU7 683 aa18.94■□□□□ 0.62
SMARCD1-209ENST00000550477 RNF170Q96K19 258 aa18.94■□□□□ 0.62
SMARCD1-209ENST00000550477 ARMC1Q9NVT9 282 aa18.94■□□□□ 0.62
SMARCD1-209ENST00000550477 SF3B6Q9Y3B4 125 aaKnown RBP18.94■□□□□ 0.62
SMARCD1-209ENST00000550477 A0A1B0GW55 424 aa18.93■□□□□ 0.62
SMARCD1-209ENST00000550477 A0A1W2PRD5 423 aa18.93■□□□□ 0.62
SMARCD1-209ENST00000550477 A0A1W2PRF3 423 aa18.93■□□□□ 0.62
SMARCD1-209ENST00000550477 A0A1W2PRM7 423 aa18.93■□□□□ 0.62
SMARCD1-209ENST00000550477 RNASEK-C17orf49H0YIS7 233 aa18.93■□□□□ 0.62
SMARCD1-209ENST00000550477 SOX14O95416 240 aa18.93■□□□□ 0.62
SMARCD1-209ENST00000550477 DUX4L2P0CJ85 424 aa18.93■□□□□ 0.62
SMARCD1-209ENST00000550477 DUX4L3P0CJ86 424 aa18.93■□□□□ 0.62
SMARCD1-209ENST00000550477 DUX4L4P0CJ87 422 aa18.93■□□□□ 0.62
SMARCD1-209ENST00000550477 DUX4L5P0CJ88 424 aa18.93■□□□□ 0.62
SMARCD1-209ENST00000550477 DUX4L6P0CJ89 424 aa18.93■□□□□ 0.62
SMARCD1-209ENST00000550477 DUX4L7P0CJ90 424 aa18.93■□□□□ 0.62
SMARCD1-209ENST00000550477 NDUFB7P17568 137 aa18.93■□□□□ 0.62
SMARCD1-209ENST00000550477 PRDX4Q13162 271 aa18.93■□□□□ 0.62
SMARCD1-209ENST00000550477 C11orf88Q6PI97 169 aa18.93■□□□□ 0.62
SMARCD1-209ENST00000550477 DUX4L9Q6RFH8 374 aaPredicted RBP18.93■□□□□ 0.62
SMARCD1-209ENST00000550477 CYP2R1Q6VVX0 501 aa18.93■□□□□ 0.62
SMARCD1-209ENST00000550477 FGFRL1Q8N441 504 aa18.93■□□□□ 0.62
SMARCD1-209ENST00000550477 OR4Q3Q8NH05 313 aa18.93■□□□□ 0.62
SMARCD1-209ENST00000550477 RAB3IPQ96QF0 476 aaPredicted RBP18.93■□□□□ 0.62
SMARCD1-209ENST00000550477 SEMA6AQ9H2E6 1030 aa18.93■□□□□ 0.62
SMARCD1-209ENST00000550477 MAGIXQ9H6Y5 334 aa18.93■□□□□ 0.62
SMARCD1-209ENST00000550477 SNTG1Q9NSN8 517 aa18.93■□□□□ 0.62
SMARCD1-209ENST00000550477 DUX4Q9UBX2 424 aa18.93■□□□□ 0.62
SMARCD1-209ENST00000550477 SAMHD1Q9Y3Z3 626 aaKnown RBP18.93■□□□□ 0.62
SMARCD1-209ENST00000550477 ZNF850A8MQ14 1090 aa18.92■□□□□ 0.62
SMARCD1-209ENST00000550477 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.92■□□□□ 0.62
SMARCD1-209ENST00000550477 GLCEO94923 617 aa18.92■□□□□ 0.62
SMARCD1-209ENST00000550477 CST4P01036 141 aa18.92■□□□□ 0.62
SMARCD1-209ENST00000550477 GABRA5P31644 462 aa18.92■□□□□ 0.62
SMARCD1-209ENST00000550477 CAV3P56539 151 aa18.92■□□□□ 0.62
SMARCD1-209ENST00000550477 EGR3Q06889 387 aa18.92■□□□□ 0.62
SMARCD1-209ENST00000550477 LINC01590Q5TEZ4 76 aa18.92■□□□□ 0.62
SMARCD1-209ENST00000550477 ZNF788Q6ZQV5 615 aa18.92■□□□□ 0.62
SMARCD1-209ENST00000550477 PRSS45Q7RTY3 260 aa18.92■□□□□ 0.62
SMARCD1-209ENST00000550477 ZNF454Q8N9F8 522 aa18.92■□□□□ 0.62
SMARCD1-209ENST00000550477 OR5D13Q8NGL4 314 aa18.92■□□□□ 0.62
SMARCD1-209ENST00000550477 PIGCQ92535 297 aa18.92■□□□□ 0.62
SMARCD1-209ENST00000550477 PPA2Q9H2U2 334 aa18.92■□□□□ 0.62
SMARCD1-209ENST00000550477 FBLN5Q9UBX5 448 aa18.92■□□□□ 0.62
SMARCD1-209ENST00000550477 U3KQV3 271 aa18.92■□□□□ 0.62
SMARCD1-209ENST00000550477 NOTCH1P46531 2555 aa18.92■□□□□ 0.62
SMARCD1-209ENST00000550477 H3BN98 237 aa18.91■□□□□ 0.62
SMARCD1-209ENST00000550477 LYNP07948 512 aa18.91■□□□□ 0.62
SMARCD1-209ENST00000550477 GLRA1P23415 457 aa18.91■□□□□ 0.62
SMARCD1-209ENST00000550477 SAA4P35542 130 aa18.91■□□□□ 0.62
SMARCD1-209ENST00000550477 OPRL1P41146 370 aa18.91■□□□□ 0.62
SMARCD1-209ENST00000550477 MAGEA2P43356 314 aa18.91■□□□□ 0.62
SMARCD1-209ENST00000550477 GABRA2P47869 451 aa18.91■□□□□ 0.62
SMARCD1-209ENST00000550477 ELF3P78545 371 aaPredicted RBP18.91■□□□□ 0.62
SMARCD1-209ENST00000550477 GK3PQ14409 553 aa18.91■□□□□ 0.62
SMARCD1-209ENST00000550477 FAM98BQ52LJ0 330 aaKnown RBP18.91■□□□□ 0.62
SMARCD1-209ENST00000550477 OR2T5Q6IEZ7 315 aa18.91■□□□□ 0.62
SMARCD1-209ENST00000550477 Q8N7P7 452 aa18.91■□□□□ 0.62
SMARCD1-209ENST00000550477 OR2T29Q8NH02 315 aa18.91■□□□□ 0.62
SMARCD1-209ENST00000550477 THEM6Q8WUY1 208 aa18.91■□□□□ 0.62
SMARCD1-209ENST00000550477 OR5P3Q8WZ94 311 aa18.91■□□□□ 0.62
SMARCD1-209ENST00000550477 RPL3LQ92901 407 aaKnown RBP18.91■□□□□ 0.62
SMARCD1-209ENST00000550477 SEH1LQ96EE3 360 aa18.91■□□□□ 0.62
SMARCD1-209ENST00000550477 OR51V1Q9H2C8 321 aa18.91■□□□□ 0.62
SMARCD1-209ENST00000550477 MUC13Q9H3R2 512 aa18.91■□□□□ 0.62
SMARCD1-209ENST00000550477 NIPAL2Q9H841 368 aa18.91■□□□□ 0.62
SMARCD1-209ENST00000550477 RAB18Q9NP72 206 aa18.91■□□□□ 0.62
SMARCD1-209ENST00000550477 NLKQ9UBE8 527 aa18.91■□□□□ 0.62
SMARCD1-209ENST00000550477 VWFP04275 2813 aa18.9■□□□□ 0.62
SMARCD1-209ENST00000550477 TET2Q6N021 2002 aaPredicted RBP18.9■□□□□ 0.62
SMARCD1-209ENST00000550477 A0A1W2PPH5 198 aa18.9■□□□□ 0.62
SMARCD1-209ENST00000550477 H0YAE9 185 aa18.9■□□□□ 0.62
SMARCD1-209ENST00000550477 AKR7A2O43488 359 aa18.9■□□□□ 0.62
SMARCD1-209ENST00000550477 TSPAN15O95858 294 aa18.9■□□□□ 0.62
SMARCD1-209ENST00000550477 ACAA1P09110 424 aaPredicted RBP18.9■□□□□ 0.62
SMARCD1-209ENST00000550477 PPP1R8Q12972 351 aaKnown RBP18.9■□□□□ 0.62
SMARCD1-209ENST00000550477 KLHL12Q53G59 568 aa18.9■□□□□ 0.62
SMARCD1-209ENST00000550477 FAM76BQ5HYJ3 339 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms