RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 CLDN12P56749 244 aa6.94□□□□□ -1.3
DEPDC4-207ENST00000549249 PPP3R1P63098 170 aa6.94□□□□□ -1.3
DEPDC4-207ENST00000549249 NKX6-1P78426 367 aaPredicted RBP6.94□□□□□ -1.3
DEPDC4-207ENST00000549249 RIPPLY1Q0D2K3 151 aa6.94□□□□□ -1.3
DEPDC4-207ENST00000549249 MALLQ13021 153 aa6.94□□□□□ -1.3
DEPDC4-207ENST00000549249 ALKBH6Q3KRA9 238 aa6.94□□□□□ -1.3
DEPDC4-207ENST00000549249 IDNKQ5T6J7 187 aa6.94□□□□□ -1.3
DEPDC4-207ENST00000549249 DDI2Q5TDH0 399 aa6.94□□□□□ -1.3
DEPDC4-207ENST00000549249 FBXW12Q6X9E4 464 aa6.94□□□□□ -1.3
DEPDC4-207ENST00000549249 PGAP1Q75T13 922 aa6.94□□□□□ -1.3
DEPDC4-207ENST00000549249 LAX1Q8IWV1 398 aa6.94□□□□□ -1.3
DEPDC4-207ENST00000549249 OR52N4Q8NGI2 321 aa6.94□□□□□ -1.3
DEPDC4-207ENST00000549249 OR5D14Q8NGL3 314 aa6.94□□□□□ -1.3
DEPDC4-207ENST00000549249 OR1J1Q8NGS3 322 aa6.94□□□□□ -1.3
DEPDC4-207ENST00000549249 OR5H6Q8NGV6 325 aa6.94□□□□□ -1.3
DEPDC4-207ENST00000549249 PP6455Q8WZ26 134 aa6.94□□□□□ -1.3
DEPDC4-207ENST00000549249 SLC25A28Q96A46 364 aa6.94□□□□□ -1.3
DEPDC4-207ENST00000549249 SPACA5Q96QH8 159 aa6.94□□□□□ -1.3
DEPDC4-207ENST00000549249 C6orf62Q9GZU0 229 aaPredicted RBP6.94□□□□□ -1.3
DEPDC4-207ENST00000549249 KCNK15Q9H427 330 aa6.94□□□□□ -1.3
DEPDC4-207ENST00000549249 OPA3Q9H6K4 179 aa6.94□□□□□ -1.3
DEPDC4-207ENST00000549249 MOV10Q9HCE1 1003 aaKnown RBP6.94□□□□□ -1.3
DEPDC4-207ENST00000549249 AKIP1Q9NQ31 210 aa6.94□□□□□ -1.3
DEPDC4-207ENST00000549249 GPR173Q9NS66 373 aa6.94□□□□□ -1.3
DEPDC4-207ENST00000549249 EIF3KQ9UBQ5 218 aaKnown RBP6.94□□□□□ -1.3
DEPDC4-207ENST00000549249 CGGBP1Q9UFW8 167 aaPredicted RBP6.94□□□□□ -1.3
DEPDC4-207ENST00000549249 PLCE1Q9P212 2302 aa6.94□□□□□ -1.3
DEPDC4-207ENST00000549249 PRRC2CQ9Y520 2896 aaKnown RBP6.94□□□□□ -1.3
DEPDC4-207ENST00000549249 RELNP78509 3460 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 ZNF816-ZNF321PA0A0X1KG74 233 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 SCO2A0A1W2PP80 73 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 DPRXA6NFQ7 191 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 GGT3PA6NGU5 568 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 CD300LBA8K4G0 201 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 ATP6V1G2-DDX39BF2Z307 99 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 SLC17A2O00624 439 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 GMDSO60547 372 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 HPGDSO60760 199 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 ALX3O95076 343 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 NRASP01111 189 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 ALDOBP05062 364 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 PPP3CBP16298 524 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 RAB3AP20336 220 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 SORDQ00796 357 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 PLA2G7Q13093 441 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 SNTB2Q13425 540 aaKnown RBP6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 C1orf100Q5SVJ3 147 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 CLVS2Q5SYC1 327 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 ZBTB37Q5TC79 503 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 OR2T2Q6IF00 324 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 MTFR2Q6P444 385 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 SHISA2Q6UWI4 295 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 CROCCP3Q8IVE0 287 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 MFSD4AQ8N468 514 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 NKAIN3Q8N8D7 197 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 OR4D6Q8NGJ1 314 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 OR5L1Q8NGL2 311 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 LINC01560Q8TB33 94 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 TRMT10AQ8TBZ6 339 aaKnown RBP6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 LGALS14Q8TCE9 139 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 KLF14Q8TD94 323 aaPredicted RBP6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 NPRL2Q8WTW4 380 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 CA5BP1Q8WTZ4 195 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 HPSE2Q8WWQ2 592 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 DVL3Q92997 716 aaPredicted RBP6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 PIGTQ969N2 578 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 CMBLQ96DG6 245 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 WDFY2Q96P53 400 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 METTL17Q9H7H0 456 aaPredicted RBP6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 ABCB9Q9NP78 766 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 TMEM138Q9NPI0 162 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 KCNJ16Q9NPI9 418 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 CKLFQ9UBR5 152 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 OR5V1Q9UGF6 321 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 KCNN3Q9UGI6 736 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 STEAP1Q9UHE8 339 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 GPR160Q9UJ42 338 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 CMAHPQ9Y471 501 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 ICE1Q9Y2F5 2266 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 DOPEY2Q9Y3R5 2298 aa6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 SPTBN1Q01082 2364 aaKnown RBP6.93□□□□□ -1.3
DEPDC4-207ENST00000549249 IGKV1-27A0A075B6S5 117 aa6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 MEGF11A6BM72 1044 aa6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 ZNF850A8MQ14 1090 aa6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 IQCF6A8MYZ5 107 aa6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 CLDN14O95500 239 aa6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 CST4P01036 141 aa6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 CRYAAP02489 173 aa6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 RPLP1P05386 114 aaKnown RBP6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 EIF4EP06730 217 aaKnown RBP6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 RNF224P0DH78 156 aa6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 RAC2P15153 192 aa6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 AGAP20933 346 aa6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 AZGP1P25311 298 aaKnown RBP6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 LOXP28300 417 aaPredicted RBP6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 TNFSF8P32971 234 aa6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 RAD52P43351 418 aa6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 OR3A4PP47883 348 aa6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 MMP15P51511 669 aa6.92□□□□□ -1.3
DEPDC4-207ENST00000549249 BSPH1Q075Z2 132 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms