RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 DUX4L3P0CJ86 424 aa10.55□□□□□ -0.72
PTCH1-218ENST00000548945 DUX4L4P0CJ87 422 aa10.55□□□□□ -0.72
PTCH1-218ENST00000548945 DUX4L5P0CJ88 424 aa10.55□□□□□ -0.72
PTCH1-218ENST00000548945 DUX4L6P0CJ89 424 aa10.55□□□□□ -0.72
PTCH1-218ENST00000548945 DUX4L7P0CJ90 424 aa10.55□□□□□ -0.72
PTCH1-218ENST00000548945 SPI1P17947 270 aa10.55□□□□□ -0.72
PTCH1-218ENST00000548945 GNALP38405 381 aa10.55□□□□□ -0.72
PTCH1-218ENST00000548945 CX3CR1P49238 355 aa10.55□□□□□ -0.72
PTCH1-218ENST00000548945 IL5RAQ01344 420 aa10.55□□□□□ -0.72
PTCH1-218ENST00000548945 CRMP1Q14194 572 aa10.55□□□□□ -0.72
PTCH1-218ENST00000548945 STUMQ69YW2 141 aa10.55□□□□□ -0.72
PTCH1-218ENST00000548945 ZNF770Q6IQ21 691 aaPredicted RBP10.55□□□□□ -0.72
PTCH1-218ENST00000548945 DUX4L9Q6RFH8 374 aaPredicted RBP10.55□□□□□ -0.72
PTCH1-218ENST00000548945 PRSS45Q7RTY3 260 aa10.55□□□□□ -0.72
PTCH1-218ENST00000548945 AQP12AQ8IXF9 295 aa10.55□□□□□ -0.72
PTCH1-218ENST00000548945 PDZD9Q8IXQ8 264 aa10.55□□□□□ -0.72
PTCH1-218ENST00000548945 FAM216BQ8N7L0 139 aa10.55□□□□□ -0.72
PTCH1-218ENST00000548945 ZNF511Q8NB15 262 aa10.55□□□□□ -0.72
PTCH1-218ENST00000548945 OR8D4Q8NGM9 314 aa10.55□□□□□ -0.72
PTCH1-218ENST00000548945 RNF133Q8WVZ7 376 aa10.55□□□□□ -0.72
PTCH1-218ENST00000548945 SGK3Q96BR1 496 aa10.55□□□□□ -0.72
PTCH1-218ENST00000548945 REEP6Q96HR9 211 aa10.55□□□□□ -0.72
PTCH1-218ENST00000548945 RGCCQ9H4X1 137 aa10.55□□□□□ -0.72
PTCH1-218ENST00000548945 DCLRE1BQ9H816 532 aa10.55□□□□□ -0.72
PTCH1-218ENST00000548945 ABCB9Q9NP78 766 aa10.55□□□□□ -0.72
PTCH1-218ENST00000548945 TBC1D23Q9NUY8 699 aa10.55□□□□□ -0.72
PTCH1-218ENST00000548945 DUX4Q9UBX2 424 aa10.55□□□□□ -0.72
PTCH1-218ENST00000548945 N6AMT1Q9Y5N5 214 aa10.55□□□□□ -0.72
PTCH1-218ENST00000548945 MPC1Q9Y5U8 109 aa10.55□□□□□ -0.72
PTCH1-218ENST00000548945 ZNF816-ZNF321PA0A0X1KG74 233 aa10.54□□□□□ -0.72
PTCH1-218ENST00000548945 TMEM210A6NLX4 147 aa10.54□□□□□ -0.72
PTCH1-218ENST00000548945 ANXA2P2A6NMY6 339 aa10.54□□□□□ -0.72
PTCH1-218ENST00000548945 RNASEK-C17orf49H0YIS7 233 aa10.54□□□□□ -0.72
PTCH1-218ENST00000548945 M0R1W7 72 aa10.54□□□□□ -0.72
PTCH1-218ENST00000548945 TNFRSF11BO00300 401 aa10.54□□□□□ -0.72
PTCH1-218ENST00000548945 CDIPTO14735 213 aa10.54□□□□□ -0.72
PTCH1-218ENST00000548945 TSPAN15O95858 294 aa10.54□□□□□ -0.72
PTCH1-218ENST00000548945 IFNGP01579 166 aa10.54□□□□□ -0.72
PTCH1-218ENST00000548945 ANXA2P07355 339 aaKnown RBP10.54□□□□□ -0.72
PTCH1-218ENST00000548945 ATP6V1B2P21281 511 aa10.54□□□□□ -0.72
PTCH1-218ENST00000548945 HSD11B1P28845 292 aa10.54□□□□□ -0.72
PTCH1-218ENST00000548945 GSK3AP49840 483 aa10.54□□□□□ -0.72
PTCH1-218ENST00000548945 UBE2E1P51965 193 aa10.54□□□□□ -0.72
PTCH1-218ENST00000548945 CSNK2BP67870 215 aa10.54□□□□□ -0.72
PTCH1-218ENST00000548945 ACSM1Q08AH1 577 aa10.54□□□□□ -0.72
PTCH1-218ENST00000548945 NCR3LG1Q68D85 454 aa10.54□□□□□ -0.72
PTCH1-218ENST00000548945 ZFP1Q6P2D0 407 aa10.54□□□□□ -0.72
PTCH1-218ENST00000548945 SPATA24Q86W54 205 aa10.54□□□□□ -0.72
PTCH1-218ENST00000548945 FGFRL1Q8N441 504 aa10.54□□□□□ -0.72
PTCH1-218ENST00000548945 Q8N7P7 452 aa10.54□□□□□ -0.72
PTCH1-218ENST00000548945 OR2T33Q8NG76 320 aa10.54□□□□□ -0.72
PTCH1-218ENST00000548945 OR9Q2Q8NGE9 314 aa10.54□□□□□ -0.72
PTCH1-218ENST00000548945 OR6K6Q8NGW6 343 aa10.54□□□□□ -0.72
PTCH1-218ENST00000548945 TNFRSF14Q92956 283 aa10.54□□□□□ -0.72
PTCH1-218ENST00000548945 ITPKCQ96DU7 683 aa10.54□□□□□ -0.72
PTCH1-218ENST00000548945 MED30Q96HR3 178 aa10.54□□□□□ -0.72
PTCH1-218ENST00000548945 MICU1Q9BPX6 476 aa10.54□□□□□ -0.72
PTCH1-218ENST00000548945 RTL8AQ9BWD3 113 aa10.54□□□□□ -0.72
PTCH1-218ENST00000548945 PAPOLGQ9BWT3 736 aaKnown RBP10.54□□□□□ -0.72
PTCH1-218ENST00000548945 TSSK6Q9BXA6 273 aa10.54□□□□□ -0.72
PTCH1-218ENST00000548945 OR10A2Q9H208 303 aa10.54□□□□□ -0.72
PTCH1-218ENST00000548945 METTL8Q9H825 291 aaKnown RBP10.54□□□□□ -0.72
PTCH1-218ENST00000548945 SIRT7Q9NRC8 400 aa10.54□□□□□ -0.72
PTCH1-218ENST00000548945 HAO2Q9NYQ3 351 aa10.54□□□□□ -0.72
PTCH1-218ENST00000548945 FBLN5Q9UBX5 448 aa10.54□□□□□ -0.72
PTCH1-218ENST00000548945 TCRBV3S1A0A5B6 114 aa10.53□□□□□ -0.72
PTCH1-218ENST00000548945 NKX6-3A6NJ46 265 aa10.53□□□□□ -0.72
PTCH1-218ENST00000548945 CCNB2O95067 398 aa10.53□□□□□ -0.72
PTCH1-218ENST00000548945 PAHP00439 452 aa10.53□□□□□ -0.72
PTCH1-218ENST00000548945 GASTP01350 101 aa10.53□□□□□ -0.72
PTCH1-218ENST00000548945 GYPBP06028 91 aa10.53□□□□□ -0.72
PTCH1-218ENST00000548945 AMY2BP19961 511 aa10.53□□□□□ -0.72
PTCH1-218ENST00000548945 SAA4P35542 130 aa10.53□□□□□ -0.72
PTCH1-218ENST00000548945 MAGEA2P43356 314 aa10.53□□□□□ -0.72
PTCH1-218ENST00000548945 CAV3P56539 151 aa10.53□□□□□ -0.72
PTCH1-218ENST00000548945 IKZF1Q13422 519 aa10.53□□□□□ -0.72
PTCH1-218ENST00000548945 EIF2B1Q14232 305 aaKnown RBP10.53□□□□□ -0.72
PTCH1-218ENST00000548945 RCN1Q15293 331 aa10.53□□□□□ -0.72
PTCH1-218ENST00000548945 KLHL12Q53G59 568 aa10.53□□□□□ -0.72
PTCH1-218ENST00000548945 FAM76BQ5HYJ3 339 aa10.53□□□□□ -0.72
PTCH1-218ENST00000548945 LINC01590Q5TEZ4 76 aa10.53□□□□□ -0.72
PTCH1-218ENST00000548945 C11orf88Q6PI97 169 aa10.53□□□□□ -0.72
PTCH1-218ENST00000548945 CYP2R1Q6VVX0 501 aa10.53□□□□□ -0.72
PTCH1-218ENST00000548945 ZNF788Q6ZQV5 615 aa10.53□□□□□ -0.72
PTCH1-218ENST00000548945 SHFQ7M4L6 423 aa10.53□□□□□ -0.72
PTCH1-218ENST00000548945 INTS14Q96SY0 518 aa10.53□□□□□ -0.72
PTCH1-218ENST00000548945 ABHD6Q9BV23 337 aa10.53□□□□□ -0.72
PTCH1-218ENST00000548945 DGCR6LQ9BY27 220 aa10.53□□□□□ -0.72
PTCH1-218ENST00000548945 SEMA6AQ9H2E6 1030 aa10.53□□□□□ -0.72
PTCH1-218ENST00000548945 S100A14Q9HCY8 104 aa10.53□□□□□ -0.72
PTCH1-218ENST00000548945 CMC2Q9NRP2 79 aa10.53□□□□□ -0.72
PTCH1-218ENST00000548945 DNAJB11Q9UBS4 358 aa10.53□□□□□ -0.72
PTCH1-218ENST00000548945 ZNF391Q9UJN7 358 aa10.53□□□□□ -0.72
PTCH1-218ENST00000548945 RHBDD3Q9Y3P4 386 aa10.53□□□□□ -0.72
PTCH1-218ENST00000548945 RIIAD1A6NNX1 92 aa10.52□□□□□ -0.73
PTCH1-218ENST00000548945 SIGLEC5O15389 551 aa10.52□□□□□ -0.73
PTCH1-218ENST00000548945 CST4P01036 141 aa10.52□□□□□ -0.73
PTCH1-218ENST00000548945 CSF1P09603 554 aa10.52□□□□□ -0.73
PTCH1-218ENST00000548945 ZNF3P17036 446 aa10.52□□□□□ -0.73
PTCH1-218ENST00000548945 OPRL1P41146 370 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms