RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 PRODHO43272 600 aa14.32□□□□□ -0.12
CHMP1A-205ENST00000548650 CRYBA1P05813 215 aa14.32□□□□□ -0.12
CHMP1A-205ENST00000548650 PRR23D2P0DMB1 279 aaPredicted RBP14.32□□□□□ -0.12
CHMP1A-205ENST00000548650 SELLP14151 372 aa14.32□□□□□ -0.12
CHMP1A-205ENST00000548650 NAA10P41227 235 aaPredicted RBP14.32□□□□□ -0.12
CHMP1A-205ENST00000548650 RPL15P61313 204 aaKnown RBP14.32□□□□□ -0.12
CHMP1A-205ENST00000548650 PRDX4Q13162 271 aa14.32□□□□□ -0.12
CHMP1A-205ENST00000548650 GINS1Q14691 196 aa14.32□□□□□ -0.12
CHMP1A-205ENST00000548650 SNCBQ16143 134 aa14.32□□□□□ -0.12
CHMP1A-205ENST00000548650 SLC36A1Q7Z2H8 476 aa14.32□□□□□ -0.12
CHMP1A-205ENST00000548650 PDZD9Q8IXQ8 264 aa14.32□□□□□ -0.12
CHMP1A-205ENST00000548650 ZNF454Q8N9F8 522 aa14.32□□□□□ -0.12
CHMP1A-205ENST00000548650 SCCPDHQ8NBX0 429 aa14.32□□□□□ -0.12
CHMP1A-205ENST00000548650 BBS1Q8NFJ9 593 aa14.32□□□□□ -0.12
CHMP1A-205ENST00000548650 OR8B12Q8NGG6 310 aa14.32□□□□□ -0.12
CHMP1A-205ENST00000548650 OR5P3Q8WZ94 311 aa14.32□□□□□ -0.12
CHMP1A-205ENST00000548650 DYRK2Q92630 601 aa14.32□□□□□ -0.12
CHMP1A-205ENST00000548650 LYZL4Q96KX0 146 aa14.32□□□□□ -0.12
CHMP1A-205ENST00000548650 PKP2Q99959 881 aa14.32□□□□□ -0.12
CHMP1A-205ENST00000548650 MICU1Q9BPX6 476 aa14.32□□□□□ -0.12
CHMP1A-205ENST00000548650 WDR13Q9H1Z4 485 aa14.32□□□□□ -0.12
CHMP1A-205ENST00000548650 CNTD2Q9H8S5 307 aa14.32□□□□□ -0.12
CHMP1A-205ENST00000548650 TAS2R1Q9NYW7 299 aa14.32□□□□□ -0.12
CHMP1A-205ENST00000548650 PDP1Q9P0J1 537 aaPredicted RBP14.32□□□□□ -0.12
CHMP1A-205ENST00000548650 ONECUT1Q9UBC0 465 aa14.32□□□□□ -0.12
CHMP1A-205ENST00000548650 MPC1Q9Y5U8 109 aa14.32□□□□□ -0.12
CHMP1A-205ENST00000548650 TMEM210A6NLX4 147 aa14.31□□□□□ -0.12
CHMP1A-205ENST00000548650 ZNF850A8MQ14 1090 aa14.31□□□□□ -0.12
CHMP1A-205ENST00000548650 GPR137BO60478 399 aa14.31□□□□□ -0.12
CHMP1A-205ENST00000548650 FAM107AO95990 144 aa14.31□□□□□ -0.12
CHMP1A-205ENST00000548650 CST4P01036 141 aa14.31□□□□□ -0.12
CHMP1A-205ENST00000548650 POU1F1P28069 291 aa14.31□□□□□ -0.12
CHMP1A-205ENST00000548650 IER3P46695 156 aa14.31□□□□□ -0.12
CHMP1A-205ENST00000548650 TGM4P49221 684 aa14.31□□□□□ -0.12
CHMP1A-205ENST00000548650 IKZF1Q13422 519 aa14.31□□□□□ -0.12
CHMP1A-205ENST00000548650 ATPAF1Q5TC12 328 aaPredicted RBP14.31□□□□□ -0.12
CHMP1A-205ENST00000548650 OLFML2AQ68BL7 652 aa14.31□□□□□ -0.12
CHMP1A-205ENST00000548650 METAP1DQ6UB28 335 aaPredicted RBP14.31□□□□□ -0.12
CHMP1A-205ENST00000548650 C17orf107Q6ZR85 190 aa14.31□□□□□ -0.12
CHMP1A-205ENST00000548650 HS3ST5Q8IZT8 346 aa14.31□□□□□ -0.12
CHMP1A-205ENST00000548650 OR10Z1Q8NGY1 313 aa14.31□□□□□ -0.12
CHMP1A-205ENST00000548650 TBC1D15Q8TC07 691 aa14.31□□□□□ -0.12
CHMP1A-205ENST00000548650 CANT1Q8WVQ1 401 aa14.31□□□□□ -0.12
CHMP1A-205ENST00000548650 RPL3LQ92901 407 aaKnown RBP14.31□□□□□ -0.12
CHMP1A-205ENST00000548650 RAB3IPQ96QF0 476 aaPredicted RBP14.31□□□□□ -0.12
CHMP1A-205ENST00000548650 CITED1Q99966 193 aa14.31□□□□□ -0.12
CHMP1A-205ENST00000548650 ABCB9Q9NP78 766 aa14.31□□□□□ -0.12
CHMP1A-205ENST00000548650 SIRT7Q9NRC8 400 aa14.31□□□□□ -0.12
CHMP1A-205ENST00000548650 FAM53CQ9NYF3 392 aa14.31□□□□□ -0.12
CHMP1A-205ENST00000548650 HAO2Q9NYQ3 351 aa14.31□□□□□ -0.12
CHMP1A-205ENST00000548650 VWFP04275 2813 aa14.31□□□□□ -0.12
CHMP1A-205ENST00000548650 NOTCH1P46531 2555 aa14.3□□□□□ -0.12
CHMP1A-205ENST00000548650 CLPSL1A2RUU4 121 aa14.3□□□□□ -0.12
CHMP1A-205ENST00000548650 AQP12BA6NM10 295 aa14.3□□□□□ -0.12
CHMP1A-205ENST00000548650 NDUFB3O43676 98 aa14.3□□□□□ -0.12
CHMP1A-205ENST00000548650 TFF1P04155 84 aa14.3□□□□□ -0.12
CHMP1A-205ENST00000548650 OSMP13725 252 aa14.3□□□□□ -0.12
CHMP1A-205ENST00000548650 SLC2A5P22732 501 aa14.3□□□□□ -0.12
CHMP1A-205ENST00000548650 DCTDP32321 178 aa14.3□□□□□ -0.12
CHMP1A-205ENST00000548650 GMFBP60983 142 aa14.3□□□□□ -0.12
CHMP1A-205ENST00000548650 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.3□□□□□ -0.12
CHMP1A-205ENST00000548650 CPOQ8IVL8 374 aa14.3□□□□□ -0.12
CHMP1A-205ENST00000548650 AQP12AQ8IXF9 295 aa14.3□□□□□ -0.12
CHMP1A-205ENST00000548650 CCDC197Q8NCU1 140 aa14.3□□□□□ -0.12
CHMP1A-205ENST00000548650 OR5T2Q8NGG2 359 aa14.3□□□□□ -0.12
CHMP1A-205ENST00000548650 C8orf46Q8TAG6 207 aa14.3□□□□□ -0.12
CHMP1A-205ENST00000548650 THEM6Q8WUY1 208 aa14.3□□□□□ -0.12
CHMP1A-205ENST00000548650 DMRTB1Q96MA1 342 aa14.3□□□□□ -0.12
CHMP1A-205ENST00000548650 GAFA1Q96PS6 74 aa14.3□□□□□ -0.12
CHMP1A-205ENST00000548650 DCTN5Q9BTE1 182 aa14.3□□□□□ -0.12
CHMP1A-205ENST00000548650 DNTTIP1Q9H147 329 aa14.3□□□□□ -0.12
CHMP1A-205ENST00000548650 C1orf21Q9H246 121 aa14.3□□□□□ -0.12
CHMP1A-205ENST00000548650 SEMA6AQ9H2E6 1030 aa14.3□□□□□ -0.12
CHMP1A-205ENST00000548650 LRP12Q9Y561 859 aa14.3□□□□□ -0.12
CHMP1A-205ENST00000548650 NKX6-3A6NJ46 265 aa14.29□□□□□ -0.12
CHMP1A-205ENST00000548650 GPR37O15354 613 aa14.29□□□□□ -0.12
CHMP1A-205ENST00000548650 ALOX5APP20292 161 aa14.29□□□□□ -0.12
CHMP1A-205ENST00000548650 DLX1P56177 255 aa14.29□□□□□ -0.12
CHMP1A-205ENST00000548650 KRTAP10-3P60369 221 aa14.29□□□□□ -0.12
CHMP1A-205ENST00000548650 CDK5Q00535 292 aa14.29□□□□□ -0.12
CHMP1A-205ENST00000548650 PRB3Q04118 309 aaPredicted RBP14.29□□□□□ -0.12
CHMP1A-205ENST00000548650 LRRC10Q5BKY1 277 aa14.29□□□□□ -0.12
CHMP1A-205ENST00000548650 FAM76BQ5HYJ3 339 aa14.29□□□□□ -0.12
CHMP1A-205ENST00000548650 SLC35D3Q5M8T2 416 aa14.29□□□□□ -0.12
CHMP1A-205ENST00000548650 Q8N7P7 452 aa14.29□□□□□ -0.12
CHMP1A-205ENST00000548650 THTPAQ9BU02 230 aa14.29□□□□□ -0.12
CHMP1A-205ENST00000548650 NIPAL2Q9H841 368 aa14.29□□□□□ -0.12
CHMP1A-205ENST00000548650 SLC25A19Q9HC21 320 aa14.29□□□□□ -0.12
CHMP1A-205ENST00000548650 SNTG1Q9NSN8 517 aa14.29□□□□□ -0.12
CHMP1A-205ENST00000548650 ZNRD1Q9P1U0 126 aa14.29□□□□□ -0.12
CHMP1A-205ENST00000548650 DNAJB11Q9UBS4 358 aa14.29□□□□□ -0.12
CHMP1A-205ENST00000548650 ZNF391Q9UJN7 358 aa14.29□□□□□ -0.12
CHMP1A-205ENST00000548650 RNASEK-C17orf49H0YIS7 233 aa14.28□□□□□ -0.12
CHMP1A-205ENST00000548650 GNGT2O14610 69 aa14.28□□□□□ -0.12
CHMP1A-205ENST00000548650 AKR7A2O43488 359 aa14.28□□□□□ -0.12
CHMP1A-205ENST00000548650 E2F6O75461 281 aa14.28□□□□□ -0.12
CHMP1A-205ENST00000548650 HMGN1P05114 100 aa14.28□□□□□ -0.12
CHMP1A-205ENST00000548650 TAF9Q16594 264 aa14.28□□□□□ -0.12
CHMP1A-205ENST00000548650 DGUOKQ16854 277 aa14.28□□□□□ -0.12
CHMP1A-205ENST00000548650 BRICD5Q6PL45 260 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms