RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 PKP2Q99959 881 aa17.45■□□□□ 0.38
SCARB1-210ENST00000545493 RTL8AQ9BWD3 113 aa17.45■□□□□ 0.38
SCARB1-210ENST00000545493 RPUSD1Q9UJJ7 312 aaKnown RBP17.45■□□□□ 0.38
SCARB1-210ENST00000545493 MPC1Q9Y5U8 109 aa17.45■□□□□ 0.38
SCARB1-210ENST00000545493 DNAJC8O75937 253 aaPredicted RBP17.44■□□□□ 0.38
SCARB1-210ENST00000545493 CST4P01036 141 aa17.44■□□□□ 0.38
SCARB1-210ENST00000545493 SELLP14151 372 aa17.44■□□□□ 0.38
SCARB1-210ENST00000545493 AMY2BP19961 511 aa17.44■□□□□ 0.38
SCARB1-210ENST00000545493 DAPP51397 102 aa17.44■□□□□ 0.38
SCARB1-210ENST00000545493 BPIFB3P59826 476 aa17.44■□□□□ 0.38
SCARB1-210ENST00000545493 SNCBQ16143 134 aa17.44■□□□□ 0.38
SCARB1-210ENST00000545493 OR5P3Q8WZ94 311 aa17.44■□□□□ 0.38
SCARB1-210ENST00000545493 RPL3LQ92901 407 aaKnown RBP17.44■□□□□ 0.38
SCARB1-210ENST00000545493 UTP4Q969X6 686 aaKnown RBP17.44■□□□□ 0.38
SCARB1-210ENST00000545493 C12orf43Q96C57 262 aaKnown RBP17.44■□□□□ 0.38
SCARB1-210ENST00000545493 NIPAL2Q9H841 368 aa17.44■□□□□ 0.38
SCARB1-210ENST00000545493 PAPOLBQ9NRJ5 636 aaKnown RBP17.44■□□□□ 0.38
SCARB1-210ENST00000545493 FAM206AQ9NX38 181 aa17.44■□□□□ 0.38
SCARB1-210ENST00000545493 TVP23BQ9NYZ1 205 aa17.44■□□□□ 0.38
SCARB1-210ENST00000545493 KIF17Q9P2E2 1029 aa17.44■□□□□ 0.38
SCARB1-210ENST00000545493 LAMP5Q9UJQ1 280 aa17.44■□□□□ 0.38
SCARB1-210ENST00000545493 COPS3Q9UNS2 423 aa17.44■□□□□ 0.38
SCARB1-210ENST00000545493 TMEM210A6NLX4 147 aa17.43■□□□□ 0.38
SCARB1-210ENST00000545493 PSMD9O00233 223 aa17.43■□□□□ 0.38
SCARB1-210ENST00000545493 ECDO95905 644 aaPredicted RBP17.43■□□□□ 0.38
SCARB1-210ENST00000545493 MELTFP08582 738 aa17.43■□□□□ 0.38
SCARB1-210ENST00000545493 CRISP1P54107 249 aa17.43■□□□□ 0.38
SCARB1-210ENST00000545493 ARF6P62330 175 aa17.43■□□□□ 0.38
SCARB1-210ENST00000545493 IL13RA1P78552 427 aa17.43■□□□□ 0.38
SCARB1-210ENST00000545493 SNAPC1Q16533 368 aa17.43■□□□□ 0.38
SCARB1-210ENST00000545493 C11orf91Q3C1V1 193 aa17.43■□□□□ 0.38
SCARB1-210ENST00000545493 SHISA2Q6UWI4 295 aa17.43■□□□□ 0.38
SCARB1-210ENST00000545493 Q6YL49 198 aa17.43■□□□□ 0.38
SCARB1-210ENST00000545493 ZDHHC23Q8IYP9 409 aa17.43■□□□□ 0.38
SCARB1-210ENST00000545493 OR10Z1Q8NGY1 313 aa17.43■□□□□ 0.38
SCARB1-210ENST00000545493 GATAD2BQ8WXI9 593 aa17.43■□□□□ 0.38
SCARB1-210ENST00000545493 DNAJC9Q8WXX5 260 aa17.43■□□□□ 0.38
SCARB1-210ENST00000545493 LHX4Q969G2 390 aa17.43■□□□□ 0.38
SCARB1-210ENST00000545493 ZDHHC16Q969W1 377 aa17.43■□□□□ 0.38
SCARB1-210ENST00000545493 NRBF2Q96F24 287 aa17.43■□□□□ 0.38
SCARB1-210ENST00000545493 CADM1Q9BY67 442 aaKnown RBP17.43■□□□□ 0.38
SCARB1-210ENST00000545493 TTTY10Q9BZA0 68 aa17.43■□□□□ 0.38
SCARB1-210ENST00000545493 WDR13Q9H1Z4 485 aa17.43■□□□□ 0.38
SCARB1-210ENST00000545493 ABCB9Q9NP78 766 aa17.43■□□□□ 0.38
SCARB1-210ENST00000545493 ZNF391Q9UJN7 358 aa17.43■□□□□ 0.38
SCARB1-210ENST00000545493 M0R129 80 aa17.42■□□□□ 0.38
SCARB1-210ENST00000545493 PRKYO43930 277 aa17.42■□□□□ 0.38
SCARB1-210ENST00000545493 TFF1P04155 84 aa17.42■□□□□ 0.38
SCARB1-210ENST00000545493 MDKP21741 143 aaPredicted RBP17.42■□□□□ 0.38
SCARB1-210ENST00000545493 DCTDP32321 178 aa17.42■□□□□ 0.38
SCARB1-210ENST00000545493 GMFBP60983 142 aa17.42■□□□□ 0.38
SCARB1-210ENST00000545493 FAM76BQ5HYJ3 339 aa17.42■□□□□ 0.38
SCARB1-210ENST00000545493 C16orf87Q6PH81 154 aa17.42■□□□□ 0.38
SCARB1-210ENST00000545493 KRT77Q7Z794 578 aa17.42■□□□□ 0.38
SCARB1-210ENST00000545493 LY6G5BQ8NDX9 201 aa17.42■□□□□ 0.38
SCARB1-210ENST00000545493 PIGCQ92535 297 aa17.42■□□□□ 0.38
SCARB1-210ENST00000545493 RAB3IPQ96QF0 476 aaPredicted RBP17.42■□□□□ 0.38
SCARB1-210ENST00000545493 YIPF3Q9GZM5 350 aa17.42■□□□□ 0.38
SCARB1-210ENST00000545493 NOX4Q9NPH5 578 aa17.42■□□□□ 0.38
SCARB1-210ENST00000545493 TNFRSF19Q9NS68 423 aa17.42■□□□□ 0.38
SCARB1-210ENST00000545493 SNTG1Q9NSN8 517 aa17.42■□□□□ 0.38
SCARB1-210ENST00000545493 IGHV1-69DA0A0B4J2H0 117 aa17.41■□□□□ 0.38
SCARB1-210ENST00000545493 IGLV3-1P01715 115 aa17.41■□□□□ 0.38
SCARB1-210ENST00000545493 IGHV1-69P01742 117 aa17.41■□□□□ 0.38
SCARB1-210ENST00000545493 IKZF1Q13422 519 aa17.41■□□□□ 0.38
SCARB1-210ENST00000545493 PDCD1Q15116 288 aa17.41■□□□□ 0.38
SCARB1-210ENST00000545493 PRR31Q5SQ13 230 aa17.41■□□□□ 0.38
SCARB1-210ENST00000545493 LCN1P1Q5VSP4 162 aa17.41■□□□□ 0.38
SCARB1-210ENST00000545493 KCTD8Q6ZWB6 473 aa17.41■□□□□ 0.38
SCARB1-210ENST00000545493 KRT74Q7RTS7 529 aa17.41■□□□□ 0.38
SCARB1-210ENST00000545493 SLC36A1Q7Z2H8 476 aa17.41■□□□□ 0.38
SCARB1-210ENST00000545493 VMO1Q7Z5L0 202 aa17.41■□□□□ 0.38
SCARB1-210ENST00000545493 SCCPDHQ8NBX0 429 aa17.41■□□□□ 0.38
SCARB1-210ENST00000545493 GAFA1Q96PS6 74 aa17.41■□□□□ 0.38
SCARB1-210ENST00000545493 OR8B4Q96RC9 309 aa17.41■□□□□ 0.38
SCARB1-210ENST00000545493 TEAD3Q99594 435 aa17.41■□□□□ 0.38
SCARB1-210ENST00000545493 TEX12Q9BXU0 123 aa17.41■□□□□ 0.38
SCARB1-210ENST00000545493 CHIAQ9BZP6 476 aa17.41■□□□□ 0.38
SCARB1-210ENST00000545493 ACOXLQ9NUZ1 547 aa17.41■□□□□ 0.38
SCARB1-210ENST00000545493 KPTNQ9Y664 436 aa17.41■□□□□ 0.38
SCARB1-210ENST00000545493 A0A0U1RQV5 110 aa17.4■□□□□ 0.38
SCARB1-210ENST00000545493 ZNF816-ZNF321PA0A0X1KG74 233 aa17.4■□□□□ 0.38
SCARB1-210ENST00000545493 FAM181BA6NEQ2 426 aa17.4■□□□□ 0.38
SCARB1-210ENST00000545493 GSC2O15499 205 aa17.4■□□□□ 0.38
SCARB1-210ENST00000545493 AKR7A2O43488 359 aa17.4■□□□□ 0.38
SCARB1-210ENST00000545493 MITFO75030 526 aaPredicted RBP17.4■□□□□ 0.38
SCARB1-210ENST00000545493 OMGP23515 440 aa17.4■□□□□ 0.38
SCARB1-210ENST00000545493 TGM4P49221 684 aa17.4■□□□□ 0.38
SCARB1-210ENST00000545493 MFGE8Q08431 387 aaPredicted RBP17.4■□□□□ 0.38
SCARB1-210ENST00000545493 PTGES3Q15185 160 aaKnown RBP17.4■□□□□ 0.38
SCARB1-210ENST00000545493 CDONQ4KMG0 1287 aa17.4■□□□□ 0.38
SCARB1-210ENST00000545493 BCDIN3DQ7Z5W3 292 aaKnown RBP17.4■□□□□ 0.38
SCARB1-210ENST00000545493 PDZD9Q8IXQ8 264 aa17.4■□□□□ 0.38
SCARB1-210ENST00000545493 TMEM86BQ8N661 226 aa17.4■□□□□ 0.38
SCARB1-210ENST00000545493 OR5T2Q8NGG2 359 aa17.4■□□□□ 0.38
SCARB1-210ENST00000545493 TMIGD2Q96BF3 282 aa17.4■□□□□ 0.38
SCARB1-210ENST00000545493 CNN2Q99439 309 aaKnown RBP17.4■□□□□ 0.38
SCARB1-210ENST00000545493 HAO2Q9NYQ3 351 aa17.4■□□□□ 0.38
SCARB1-210ENST00000545493 A0A0U1RQK1 487 aa17.39■□□□□ 0.37
SCARB1-210ENST00000545493 TMEM269A0A1B0GVZ9 245 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms