RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 FCGR1BQ92637 280 aa12.28□□□□□ -0.44
TNFRSF1A-216ENST00000543995 FGGYQ96C11 551 aa12.28□□□□□ -0.44
TNFRSF1A-216ENST00000543995 MEGF10Q96KG7 1140 aa12.28□□□□□ -0.44
TNFRSF1A-216ENST00000543995 PGLYRP3Q96LB9 341 aa12.28□□□□□ -0.44
TNFRSF1A-216ENST00000543995 FOXC2Q99958 501 aa12.28□□□□□ -0.44
TNFRSF1A-216ENST00000543995 MICU1Q9BPX6 476 aa12.28□□□□□ -0.44
TNFRSF1A-216ENST00000543995 RTL8AQ9BWD3 113 aa12.28□□□□□ -0.44
TNFRSF1A-216ENST00000543995 CXXC4Q9H2H0 198 aa12.28□□□□□ -0.44
TNFRSF1A-216ENST00000543995 ISYNA1Q9NPH2 558 aa12.28□□□□□ -0.44
TNFRSF1A-216ENST00000543995 GPR173Q9NS66 373 aa12.28□□□□□ -0.44
TNFRSF1A-216ENST00000543995 ZNF275Q9NSD4 429 aaPredicted RBP12.28□□□□□ -0.44
TNFRSF1A-216ENST00000543995 C14orf119Q9NWQ9 140 aa12.28□□□□□ -0.44
TNFRSF1A-216ENST00000543995 TREM2Q9NZC2 230 aa12.28□□□□□ -0.44
TNFRSF1A-216ENST00000543995 ARID1AO14497 2285 aa12.28□□□□□ -0.44
TNFRSF1A-216ENST00000543995 FLNBO75369 2602 aaKnown RBP12.28□□□□□ -0.44
TNFRSF1A-216ENST00000543995 IGHV1-69-2A0A0G2JMI3 117 aa12.27□□□□□ -0.44
TNFRSF1A-216ENST00000543995 GATBO75879 557 aaKnown RBP12.27□□□□□ -0.44
TNFRSF1A-216ENST00000543995 CD2P06729 351 aa12.27□□□□□ -0.44
TNFRSF1A-216ENST00000543995 PCMT1P22061 227 aa12.27□□□□□ -0.44
TNFRSF1A-216ENST00000543995 MAB21L1Q13394 359 aa12.27□□□□□ -0.44
TNFRSF1A-216ENST00000543995 Q5PR19 223 aa12.27□□□□□ -0.44
TNFRSF1A-216ENST00000543995 ZNF525Q8N782 197 aa12.27□□□□□ -0.44
TNFRSF1A-216ENST00000543995 RGP1Q92546 391 aaPredicted RBP12.27□□□□□ -0.44
TNFRSF1A-216ENST00000543995 RDH5Q92781 318 aa12.27□□□□□ -0.44
TNFRSF1A-216ENST00000543995 ITPKCQ96DU7 683 aa12.27□□□□□ -0.44
TNFRSF1A-216ENST00000543995 ADAT3Q96EY9 351 aaPredicted RBP12.27□□□□□ -0.44
TNFRSF1A-216ENST00000543995 RNF170Q96K19 258 aa12.27□□□□□ -0.44
TNFRSF1A-216ENST00000543995 NR1H4Q96RI1 486 aaPredicted RBP12.27□□□□□ -0.44
TNFRSF1A-216ENST00000543995 CHST5Q9GZS9 411 aa12.27□□□□□ -0.44
TNFRSF1A-216ENST00000543995 ZNF696Q9H7X3 374 aa12.27□□□□□ -0.44
TNFRSF1A-216ENST00000543995 MYOZ1Q9NP98 299 aaPredicted RBP12.27□□□□□ -0.44
TNFRSF1A-216ENST00000543995 A0A087WXM4 84 aa12.27□□□□□ -0.45
TNFRSF1A-216ENST00000543995 LYNX1G3V0Z9 82 aa12.27□□□□□ -0.45
TNFRSF1A-216ENST00000543995 CD1AP06126 327 aa12.27□□□□□ -0.45
TNFRSF1A-216ENST00000543995 GRPP07492 148 aa12.27□□□□□ -0.45
TNFRSF1A-216ENST00000543995 OCMP0CE72 109 aaPredicted RBP12.27□□□□□ -0.45
TNFRSF1A-216ENST00000543995 LYNX1P0DP58 116 aa12.27□□□□□ -0.45
TNFRSF1A-216ENST00000543995 CPEP16870 476 aa12.27□□□□□ -0.45
TNFRSF1A-216ENST00000543995 COL8A2P25067 703 aa12.27□□□□□ -0.45
TNFRSF1A-216ENST00000543995 PSMB9P28065 219 aa12.27□□□□□ -0.45
TNFRSF1A-216ENST00000543995 CD200P41217 278 aa12.27□□□□□ -0.45
TNFRSF1A-216ENST00000543995 CRYBB2P43320 205 aa12.27□□□□□ -0.45
TNFRSF1A-216ENST00000543995 GPR50Q13585 617 aa12.27□□□□□ -0.45
TNFRSF1A-216ENST00000543995 NEDD8Q15843 81 aa12.27□□□□□ -0.45
TNFRSF1A-216ENST00000543995 HFEQ30201 348 aa12.27□□□□□ -0.45
TNFRSF1A-216ENST00000543995 UBE2UQ5VVX9 321 aa12.27□□□□□ -0.45
TNFRSF1A-216ENST00000543995 PRAMEF6Q5VXH4 476 aa12.27□□□□□ -0.45
TNFRSF1A-216ENST00000543995 TMEM42Q69YG0 159 aa12.27□□□□□ -0.45
TNFRSF1A-216ENST00000543995 CLEC2AQ6UVW9 174 aa12.27□□□□□ -0.45
TNFRSF1A-216ENST00000543995 KRT74Q7RTS7 529 aa12.27□□□□□ -0.45
TNFRSF1A-216ENST00000543995 SERPINA12Q8IW75 414 aa12.27□□□□□ -0.45
TNFRSF1A-216ENST00000543995 PP6455Q8WZ26 134 aa12.27□□□□□ -0.45
TNFRSF1A-216ENST00000543995 OR5P3Q8WZ94 311 aa12.27□□□□□ -0.45
TNFRSF1A-216ENST00000543995 OPALINQ96PE5 141 aa12.27□□□□□ -0.45
TNFRSF1A-216ENST00000543995 TMED9Q9BVK6 235 aa12.27□□□□□ -0.45
TNFRSF1A-216ENST00000543995 UFSP2Q9NUQ7 469 aa12.27□□□□□ -0.45
TNFRSF1A-216ENST00000543995 PPP1R3CQ9UQK1 317 aa12.27□□□□□ -0.45
TNFRSF1A-216ENST00000543995 TACC2O95359 2948 aa12.26□□□□□ -0.45
TNFRSF1A-216ENST00000543995 DYSFO75923 2080 aa12.26□□□□□ -0.45
TNFRSF1A-216ENST00000543995 POLQO75417 2590 aa12.26□□□□□ -0.45
TNFRSF1A-216ENST00000543995 TANC2Q9HCD6 1990 aa12.26□□□□□ -0.45
TNFRSF1A-216ENST00000543995 LOC100289279A0A1B0GTE1 492 aa12.26□□□□□ -0.45
TNFRSF1A-216ENST00000543995 A6NLC8 198 aa12.26□□□□□ -0.45
TNFRSF1A-216ENST00000543995 GPM6AP51674 278 aa12.26□□□□□ -0.45
TNFRSF1A-216ENST00000543995 TPBGQ13641 420 aa12.26□□□□□ -0.45
TNFRSF1A-216ENST00000543995 CNN3Q15417 329 aaKnown RBP12.26□□□□□ -0.45
TNFRSF1A-216ENST00000543995 CLEC12BQ2HXU8 276 aa12.26□□□□□ -0.45
TNFRSF1A-216ENST00000543995 CEACAM21Q3KPI0 293 aa12.26□□□□□ -0.45
TNFRSF1A-216ENST00000543995 Q499Y3 187 aa12.26□□□□□ -0.45
TNFRSF1A-216ENST00000543995 ARMCX4Q5H9R4 360 aa12.26□□□□□ -0.45
TNFRSF1A-216ENST00000543995 SHEQ5VZ18 495 aa12.26□□□□□ -0.45
TNFRSF1A-216ENST00000543995 MOGAT3Q86VF5 341 aa12.26□□□□□ -0.45
TNFRSF1A-216ENST00000543995 MS4A15Q8N5U1 240 aa12.26□□□□□ -0.45
TNFRSF1A-216ENST00000543995 CELF2-AS1Q8N7Q2 184 aa12.26□□□□□ -0.45
TNFRSF1A-216ENST00000543995 OR5D14Q8NGL3 314 aa12.26□□□□□ -0.45
TNFRSF1A-216ENST00000543995 HPSE2Q8WWQ2 592 aa12.26□□□□□ -0.45
TNFRSF1A-216ENST00000543995 FAM168AQ92567 244 aa12.26□□□□□ -0.45
TNFRSF1A-216ENST00000543995 CCL17Q92583 94 aa12.26□□□□□ -0.45
TNFRSF1A-216ENST00000543995 YIPF5Q969M3 257 aa12.26□□□□□ -0.45
TNFRSF1A-216ENST00000543995 TMEM106AQ96A25 262 aa12.26□□□□□ -0.45
TNFRSF1A-216ENST00000543995 TECTBQ96PL2 329 aa12.26□□□□□ -0.45
TNFRSF1A-216ENST00000543995 OR14A2Q96R54 314 aa12.26□□□□□ -0.45
TNFRSF1A-216ENST00000543995 VCX3AQ9NNX9 186 aa12.26□□□□□ -0.45
TNFRSF1A-216ENST00000543995 GCM1Q9NP62 436 aa12.26□□□□□ -0.45
TNFRSF1A-216ENST00000543995 DLL4Q9NR61 685 aa12.26□□□□□ -0.45
TNFRSF1A-216ENST00000543995 SLC7A11Q9UPY5 501 aa12.26□□□□□ -0.45
TNFRSF1A-216ENST00000543995 ZNF732B4DXR9 585 aa12.25□□□□□ -0.45
TNFRSF1A-216ENST00000543995 INMTO95050 263 aa12.25□□□□□ -0.45
TNFRSF1A-216ENST00000543995 CSF3P09919 207 aa12.25□□□□□ -0.45
TNFRSF1A-216ENST00000543995 THBS2P35442 1172 aa12.25□□□□□ -0.45
TNFRSF1A-216ENST00000543995 PDLIM4P50479 330 aa12.25□□□□□ -0.45
TNFRSF1A-216ENST00000543995 RPS11P62280 158 aaKnown RBP eCLIP12.25□□□□□ -0.45
TNFRSF1A-216ENST00000543995 GNG3P63215 75 aa12.25□□□□□ -0.45
TNFRSF1A-216ENST00000543995 MRPS11P82912 194 aaKnown RBP12.25□□□□□ -0.45
TNFRSF1A-216ENST00000543995 UBE2V2Q15819 145 aa12.25□□□□□ -0.45
TNFRSF1A-216ENST00000543995 PRSS57Q6UWY2 283 aa12.25□□□□□ -0.45
TNFRSF1A-216ENST00000543995 OR1M1Q8NGA1 313 aa12.25□□□□□ -0.45
TNFRSF1A-216ENST00000543995 OR5A2Q8NGI9 324 aa12.25□□□□□ -0.45
TNFRSF1A-216ENST00000543995 ZNF420Q8TAQ5 688 aaPredicted RBP12.25□□□□□ -0.45
TNFRSF1A-216ENST00000543995 TRMT10AQ8TBZ6 339 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms