RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 HSD11B1P28845 292 aa7.5□□□□□ -1.21
NEDD8-206ENST00000531430 CX3CR1P49238 355 aa7.5□□□□□ -1.21
NEDD8-206ENST00000531430 ERVFRD-1P60508 538 aa7.5□□□□□ -1.21
NEDD8-206ENST00000531430 FAM3AP98173 230 aa7.5□□□□□ -1.21
NEDD8-206ENST00000531430 DGCR6Q14129 220 aa7.5□□□□□ -1.21
NEDD8-206ENST00000531430 COQ5Q5HYK3 327 aa7.5□□□□□ -1.21
NEDD8-206ENST00000531430 STUMQ69YW2 141 aa7.5□□□□□ -1.21
NEDD8-206ENST00000531430 LYPD4Q6UWN0 246 aa7.5□□□□□ -1.21
NEDD8-206ENST00000531430 ZNF788Q6ZQV5 615 aa7.5□□□□□ -1.21
NEDD8-206ENST00000531430 TMEM219Q86XT9 240 aa7.5□□□□□ -1.21
NEDD8-206ENST00000531430 SLC15A3Q8IY34 581 aa7.5□□□□□ -1.21
NEDD8-206ENST00000531430 TIGD4Q8IY51 512 aa7.5□□□□□ -1.21
NEDD8-206ENST00000531430 ZNRF1Q8ND25 227 aa7.5□□□□□ -1.21
NEDD8-206ENST00000531430 ZNRF4Q8WWF5 429 aa7.5□□□□□ -1.21
NEDD8-206ENST00000531430 PIGCQ92535 297 aa7.5□□□□□ -1.21
NEDD8-206ENST00000531430 C12orf43Q96C57 262 aaKnown RBP7.5□□□□□ -1.21
NEDD8-206ENST00000531430 DMRTB1Q96MA1 342 aa7.5□□□□□ -1.21
NEDD8-206ENST00000531430 GAFA1Q96PS6 74 aa7.5□□□□□ -1.21
NEDD8-206ENST00000531430 PRSS22Q9GZN4 317 aa7.5□□□□□ -1.21
NEDD8-206ENST00000531430 HEXA-AS1Q9H8Q6 139 aa7.5□□□□□ -1.21
NEDD8-206ENST00000531430 KCNG2Q9UJ96 466 aa7.5□□□□□ -1.21
NEDD8-206ENST00000531430 TENM3Q9P273 2699 aa7.49□□□□□ -1.21
NEDD8-206ENST00000531430 WI2-2373I1.2A0A1W2PRP0 233 aa7.49□□□□□ -1.21
NEDD8-206ENST00000531430 OR2AT4A6NND4 320 aa7.49□□□□□ -1.21
NEDD8-206ENST00000531430 ARPC3O15145 178 aa7.49□□□□□ -1.21
NEDD8-206ENST00000531430 GMNNO75496 209 aa7.49□□□□□ -1.21
NEDD8-206ENST00000531430 GADD45GO95257 159 aa7.49□□□□□ -1.21
NEDD8-206ENST00000531430 ACAA1P09110 424 aaPredicted RBP7.49□□□□□ -1.21
NEDD8-206ENST00000531430 RHCEP18577 417 aa7.49□□□□□ -1.21
NEDD8-206ENST00000531430 FMO3P31513 532 aa7.49□□□□□ -1.21
NEDD8-206ENST00000531430 SLC15A1P46059 708 aa7.49□□□□□ -1.21
NEDD8-206ENST00000531430 GSK3AP49840 483 aa7.49□□□□□ -1.21
NEDD8-206ENST00000531430 CBX1P83916 185 aa7.49□□□□□ -1.21
NEDD8-206ENST00000531430 SPIBQ01892 262 aa7.49□□□□□ -1.21
NEDD8-206ENST00000531430 EIF2B1Q14232 305 aaKnown RBP7.49□□□□□ -1.21
NEDD8-206ENST00000531430 ATPAF1Q5TC12 328 aaPredicted RBP7.49□□□□□ -1.21
NEDD8-206ENST00000531430 HCP5Q6MZN7 132 aa7.49□□□□□ -1.21
NEDD8-206ENST00000531430 CCDC121Q6ZUS5 278 aa7.49□□□□□ -1.21
NEDD8-206ENST00000531430 CENPVQ7Z7K6 275 aaPredicted RBP7.49□□□□□ -1.21
NEDD8-206ENST00000531430 ZDHHC21Q8IVQ6 265 aa7.49□□□□□ -1.21
NEDD8-206ENST00000531430 ZNF511Q8NB15 262 aa7.49□□□□□ -1.21
NEDD8-206ENST00000531430 OR5AU1Q8NGC0 362 aa7.49□□□□□ -1.21
NEDD8-206ENST00000531430 OR4M1Q8NGD0 313 aa7.49□□□□□ -1.21
NEDD8-206ENST00000531430 OR2T4Q8NH00 348 aa7.49□□□□□ -1.21
NEDD8-206ENST00000531430 C8orf46Q8TAG6 207 aa7.49□□□□□ -1.21
NEDD8-206ENST00000531430 OTULINQ96BN8 352 aa7.49□□□□□ -1.21
NEDD8-206ENST00000531430 PGAM5Q96HS1 289 aa7.49□□□□□ -1.21
NEDD8-206ENST00000531430 WWC2-AS2Q96NR7 200 aa7.49□□□□□ -1.21
NEDD8-206ENST00000531430 RAB3IPQ96QF0 476 aaPredicted RBP7.49□□□□□ -1.21
NEDD8-206ENST00000531430 DDOQ99489 341 aa7.49□□□□□ -1.21
NEDD8-206ENST00000531430 KCTD14Q9BQ13 255 aaPredicted RBP7.49□□□□□ -1.21
NEDD8-206ENST00000531430 SIKE1Q9BRV8 207 aa7.49□□□□□ -1.21
NEDD8-206ENST00000531430 RTL8AQ9BWD3 113 aa7.49□□□□□ -1.21
NEDD8-206ENST00000531430 OPA3Q9H6K4 179 aa7.49□□□□□ -1.21
NEDD8-206ENST00000531430 YY1AP1Q9H869 796 aa7.49□□□□□ -1.21
NEDD8-206ENST00000531430 SP140LQ9H930 580 aa7.49□□□□□ -1.21
NEDD8-206ENST00000531430 ZNF702PQ9H963 129 aa7.49□□□□□ -1.21
NEDD8-206ENST00000531430 SAR1AQ9NR31 198 aa7.49□□□□□ -1.21
NEDD8-206ENST00000531430 SERTAD4Q9NUC0 356 aa7.49□□□□□ -1.21
NEDD8-206ENST00000531430 NDUFAF4Q9P032 175 aa7.49□□□□□ -1.21
NEDD8-206ENST00000531430 NLKQ9UBE8 527 aa7.49□□□□□ -1.21
NEDD8-206ENST00000531430 AP3M1Q9Y2T2 418 aa7.49□□□□□ -1.21
NEDD8-206ENST00000531430 TCRBV4S1A1TA0A5B7 111 aa7.48□□□□□ -1.21
NEDD8-206ENST00000531430 SIGLEC5O15389 551 aa7.48□□□□□ -1.21
NEDD8-206ENST00000531430 IDH3BO43837 385 aa7.48□□□□□ -1.21
NEDD8-206ENST00000531430 GYPBP06028 91 aa7.48□□□□□ -1.21
NEDD8-206ENST00000531430 PAICSP22234 425 aaKnown RBP7.48□□□□□ -1.21
NEDD8-206ENST00000531430 HOXD3P31249 432 aaPredicted RBP7.48□□□□□ -1.21
NEDD8-206ENST00000531430 IFNGR2P38484 337 aa7.48□□□□□ -1.21
NEDD8-206ENST00000531430 VDAC2P45880 294 aaPredicted RBP7.48□□□□□ -1.21
NEDD8-206ENST00000531430 NUDT2P50583 147 aa7.48□□□□□ -1.21
NEDD8-206ENST00000531430 SMIM11AP58511 58 aa7.48□□□□□ -1.21
NEDD8-206ENST00000531430 BLCAPP62952 87 aa7.48□□□□□ -1.21
NEDD8-206ENST00000531430 IL5RAQ01344 420 aa7.48□□□□□ -1.21
NEDD8-206ENST00000531430 PRDX4Q13162 271 aa7.48□□□□□ -1.21
NEDD8-206ENST00000531430 DYNC1I2Q13409 638 aaKnown RBP7.48□□□□□ -1.21
NEDD8-206ENST00000531430 CNN3Q15417 329 aaKnown RBP7.48□□□□□ -1.21
NEDD8-206ENST00000531430 SSX2Q16385 188 aa7.48□□□□□ -1.21
NEDD8-206ENST00000531430 KHDC1LQ5JSQ8 128 aa7.48□□□□□ -1.21
NEDD8-206ENST00000531430 GLYATQ6IB77 296 aa7.48□□□□□ -1.21
NEDD8-206ENST00000531430 ZNF782Q6ZMW2 699 aaPredicted RBP7.48□□□□□ -1.21
NEDD8-206ENST00000531430 Q6ZS46 218 aa7.48□□□□□ -1.21
NEDD8-206ENST00000531430 LHFPL4Q7Z7J7 247 aa7.48□□□□□ -1.21
NEDD8-206ENST00000531430 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.48□□□□□ -1.21
NEDD8-206ENST00000531430 OR6K6Q8NGW6 343 aa7.48□□□□□ -1.21
NEDD8-206ENST00000531430 OR2T27Q8NH04 317 aa7.48□□□□□ -1.21
NEDD8-206ENST00000531430 ANGPTL6Q8NI99 470 aa7.48□□□□□ -1.21
NEDD8-206ENST00000531430 PIFOQ8TCI5 191 aa7.48□□□□□ -1.21
NEDD8-206ENST00000531430 GNPDA2Q8TDQ7 276 aa7.48□□□□□ -1.21
NEDD8-206ENST00000531430 STON2Q8WXE9 905 aa7.48□□□□□ -1.21
NEDD8-206ENST00000531430 OCSTAMPQ9BR26 566 aa7.48□□□□□ -1.21
NEDD8-206ENST00000531430 CDCA4Q9BXL8 241 aa7.48□□□□□ -1.21
NEDD8-206ENST00000531430 DNTTIP1Q9H147 329 aa7.48□□□□□ -1.21
NEDD8-206ENST00000531430 OR10A2Q9H208 303 aa7.48□□□□□ -1.21
NEDD8-206ENST00000531430 EGLN3Q9H6Z9 239 aa7.48□□□□□ -1.21
NEDD8-206ENST00000531430 COL7A1Q02388 2944 aa7.47□□□□□ -1.21
NEDD8-206ENST00000531430 hCG_1809904A0A1W2PP81 198 aa7.47□□□□□ -1.21
NEDD8-206ENST00000531430 A0A1W2PPE2 198 aa7.47□□□□□ -1.21
NEDD8-206ENST00000531430 A0A1W2PPH5 198 aa7.47□□□□□ -1.21
NEDD8-206ENST00000531430 A0A1W2PR64 198 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms