RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 SGMS2Q8NHU3 365 aa17.12■□□□□ 0.33
SDCBP-209ENST00000522243 LHX4Q969G2 390 aa17.12■□□□□ 0.33
SDCBP-209ENST00000522243 RNF170Q96K19 258 aa17.12■□□□□ 0.33
SDCBP-209ENST00000522243 RTL8AQ9BWD3 113 aa17.12■□□□□ 0.33
SDCBP-209ENST00000522243 SIRPDQ9H106 197 aa17.12■□□□□ 0.33
SDCBP-209ENST00000522243 PAPOLBQ9NRJ5 636 aaKnown RBP17.12■□□□□ 0.33
SDCBP-209ENST00000522243 SNTG1Q9NSN8 517 aa17.12■□□□□ 0.33
SDCBP-209ENST00000522243 FAM53CQ9NYF3 392 aa17.12■□□□□ 0.33
SDCBP-209ENST00000522243 CCDC182A6NF36 153 aa17.11■□□□□ 0.33
SDCBP-209ENST00000522243 GSC2O15499 205 aa17.11■□□□□ 0.33
SDCBP-209ENST00000522243 AMY2BP19961 511 aa17.11■□□□□ 0.33
SDCBP-209ENST00000522243 OMGP23515 440 aa17.11■□□□□ 0.33
SDCBP-209ENST00000522243 DAPP51397 102 aa17.11■□□□□ 0.33
SDCBP-209ENST00000522243 SNCBQ16143 134 aa17.11■□□□□ 0.33
SDCBP-209ENST00000522243 C16orf87Q6PH81 154 aa17.11■□□□□ 0.33
SDCBP-209ENST00000522243 PDZD9Q8IXQ8 264 aa17.11■□□□□ 0.33
SDCBP-209ENST00000522243 OR5P3Q8WZ94 311 aa17.11■□□□□ 0.33
SDCBP-209ENST00000522243 TEAD3Q99594 435 aa17.11■□□□□ 0.33
SDCBP-209ENST00000522243 PKP2Q99959 881 aa17.11■□□□□ 0.33
SDCBP-209ENST00000522243 CADM1Q9BY67 442 aaKnown RBP17.11■□□□□ 0.33
SDCBP-209ENST00000522243 TLNRD1Q9H1K6 362 aa17.11■□□□□ 0.33
SDCBP-209ENST00000522243 WDR13Q9H1Z4 485 aa17.11■□□□□ 0.33
SDCBP-209ENST00000522243 NIPAL2Q9H841 368 aa17.11■□□□□ 0.33
SDCBP-209ENST00000522243 UNKLQ9H9P5 680 aaKnown RBP17.11■□□□□ 0.33
SDCBP-209ENST00000522243 RPUSD1Q9UJJ7 312 aaKnown RBP17.11■□□□□ 0.33
SDCBP-209ENST00000522243 SRRM5B3KS81 715 aa17.1■□□□□ 0.33
SDCBP-209ENST00000522243 ECDO95905 644 aaPredicted RBP17.1■□□□□ 0.33
SDCBP-209ENST00000522243 CST4P01036 141 aa17.1■□□□□ 0.33
SDCBP-209ENST00000522243 TFF1P04155 84 aa17.1■□□□□ 0.33
SDCBP-209ENST00000522243 BPIFB3P59826 476 aa17.1■□□□□ 0.33
SDCBP-209ENST00000522243 IKZF1Q13422 519 aa17.1■□□□□ 0.33
SDCBP-209ENST00000522243 PTGES3Q15185 160 aaKnown RBP17.1■□□□□ 0.33
SDCBP-209ENST00000522243 DMRTC1Q5HYR2 192 aa17.1■□□□□ 0.33
SDCBP-209ENST00000522243 Q6YL49 198 aa17.1■□□□□ 0.33
SDCBP-209ENST00000522243 SLC36A1Q7Z2H8 476 aa17.1■□□□□ 0.33
SDCBP-209ENST00000522243 BCDIN3DQ7Z5W3 292 aaKnown RBP17.1■□□□□ 0.33
SDCBP-209ENST00000522243 SCCPDHQ8NBX0 429 aa17.1■□□□□ 0.33
SDCBP-209ENST00000522243 HPSE2Q8WWQ2 592 aa17.1■□□□□ 0.33
SDCBP-209ENST00000522243 UTP4Q969X6 686 aaKnown RBP17.1■□□□□ 0.33
SDCBP-209ENST00000522243 NRBF2Q96F24 287 aa17.1■□□□□ 0.33
SDCBP-209ENST00000522243 YIPF3Q9GZM5 350 aa17.1■□□□□ 0.33
SDCBP-209ENST00000522243 PRDM13Q9H4Q3 707 aa17.1■□□□□ 0.33
SDCBP-209ENST00000522243 CNTD2Q9H8S5 307 aa17.1■□□□□ 0.33
SDCBP-209ENST00000522243 DNAJB11Q9UBS4 358 aa17.1■□□□□ 0.33
SDCBP-209ENST00000522243 COPS3Q9UNS2 423 aa17.1■□□□□ 0.33
SDCBP-209ENST00000522243 TENM1Q9UKZ4 2725 aa17.09■□□□□ 0.33
SDCBP-209ENST00000522243 PRR32B1ATL7 298 aa17.09■□□□□ 0.33
SDCBP-209ENST00000522243 M0R129 80 aa17.09■□□□□ 0.33
SDCBP-209ENST00000522243 AKR7A2O43488 359 aa17.09■□□□□ 0.33
SDCBP-209ENST00000522243 NDUFB3O43676 98 aa17.09■□□□□ 0.33
SDCBP-209ENST00000522243 PRKYO43930 277 aa17.09■□□□□ 0.33
SDCBP-209ENST00000522243 MITFO75030 526 aaPredicted RBP17.09■□□□□ 0.33
SDCBP-209ENST00000522243 SELLP14151 372 aa17.09■□□□□ 0.33
SDCBP-209ENST00000522243 IL13RA1P78552 427 aa17.09■□□□□ 0.33
SDCBP-209ENST00000522243 PDCD1Q15116 288 aa17.09■□□□□ 0.33
SDCBP-209ENST00000522243 FAHD1Q6P587 224 aa17.09■□□□□ 0.33
SDCBP-209ENST00000522243 KCTD18Q6PI47 426 aaPredicted RBP17.09■□□□□ 0.33
SDCBP-209ENST00000522243 SHISA2Q6UWI4 295 aa17.09■□□□□ 0.33
SDCBP-209ENST00000522243 ZDHHC23Q8IYP9 409 aa17.09■□□□□ 0.33
SDCBP-209ENST00000522243 OR5K1Q8NHB7 308 aa17.09■□□□□ 0.33
SDCBP-209ENST00000522243 FAM81AQ8TBF8 368 aa17.09■□□□□ 0.33
SDCBP-209ENST00000522243 GATAD2BQ8WXI9 593 aa17.09■□□□□ 0.33
SDCBP-209ENST00000522243 PPP1R14AQ96A00 147 aa17.09■□□□□ 0.33
SDCBP-209ENST00000522243 FAM206AQ9NX38 181 aa17.09■□□□□ 0.33
SDCBP-209ENST00000522243 HAO2Q9NYQ3 351 aa17.09■□□□□ 0.33
SDCBP-209ENST00000522243 IGHV1-69DA0A0B4J2H0 117 aa17.08■□□□□ 0.32
SDCBP-209ENST00000522243 TMEM269A0A1B0GVZ9 245 aa17.08■□□□□ 0.32
SDCBP-209ENST00000522243 TMEM210A6NLX4 147 aa17.08■□□□□ 0.32
SDCBP-209ENST00000522243 IGHV1-69P01742 117 aa17.08■□□□□ 0.32
SDCBP-209ENST00000522243 MDKP21741 143 aaPredicted RBP17.08■□□□□ 0.32
SDCBP-209ENST00000522243 CEP78Q5JTW2 689 aa17.08■□□□□ 0.32
SDCBP-209ENST00000522243 LCN1P1Q5VSP4 162 aa17.08■□□□□ 0.32
SDCBP-209ENST00000522243 STUMQ69YW2 141 aa17.08■□□□□ 0.32
SDCBP-209ENST00000522243 FIP1L1Q6UN15 594 aaKnown RBP17.08■□□□□ 0.32
SDCBP-209ENST00000522243 COMMD2Q86X83 199 aa17.08■□□□□ 0.32
SDCBP-209ENST00000522243 OR10Z1Q8NGY1 313 aa17.08■□□□□ 0.32
SDCBP-209ENST00000522243 DNAJC9Q8WXX5 260 aa17.08■□□□□ 0.32
SDCBP-209ENST00000522243 TMIGD2Q96BF3 282 aa17.08■□□□□ 0.32
SDCBP-209ENST00000522243 FAM71F1Q96KD3 344 aaPredicted RBP17.08■□□□□ 0.32
SDCBP-209ENST00000522243 HIST1H2AAQ96QV6 131 aa17.08■□□□□ 0.32
SDCBP-209ENST00000522243 MROQ9BYG7 248 aa17.08■□□□□ 0.32
SDCBP-209ENST00000522243 ABCB9Q9NP78 766 aa17.08■□□□□ 0.32
SDCBP-209ENST00000522243 ACOXLQ9NUZ1 547 aa17.08■□□□□ 0.32
SDCBP-209ENST00000522243 ONECUT1Q9UBC0 465 aa17.08■□□□□ 0.32
SDCBP-209ENST00000522243 FAM181BA6NEQ2 426 aa17.07■□□□□ 0.32
SDCBP-209ENST00000522243 MELTFP08582 738 aa17.07■□□□□ 0.32
SDCBP-209ENST00000522243 MAP2K3P46734 347 aa17.07■□□□□ 0.32
SDCBP-209ENST00000522243 TGM4P49221 684 aa17.07■□□□□ 0.32
SDCBP-209ENST00000522243 GPM6AP51674 278 aa17.07■□□□□ 0.32
SDCBP-209ENST00000522243 PRB3Q04118 309 aaPredicted RBP17.07■□□□□ 0.32
SDCBP-209ENST00000522243 VMO1Q7Z5L0 202 aa17.07■□□□□ 0.32
SDCBP-209ENST00000522243 H1FXQ92522 213 aaKnown RBP17.07■□□□□ 0.32
SDCBP-209ENST00000522243 C12orf43Q96C57 262 aaKnown RBP17.07■□□□□ 0.32
SDCBP-209ENST00000522243 RAB3IPQ96QF0 476 aaPredicted RBP17.07■□□□□ 0.32
SDCBP-209ENST00000522243 OR8B4Q96RC9 309 aa17.07■□□□□ 0.32
SDCBP-209ENST00000522243 CHIAQ9BZP6 476 aa17.07■□□□□ 0.32
SDCBP-209ENST00000522243 PBOV1Q9GZY1 135 aa17.07■□□□□ 0.32
SDCBP-209ENST00000522243 NOX4Q9NPH5 578 aa17.07■□□□□ 0.32
SDCBP-209ENST00000522243 ZNF391Q9UJN7 358 aa17.07■□□□□ 0.32
SDCBP-209ENST00000522243 IKZF2Q9UKS7 526 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms