RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 CKLFQ9UBR5 152 aa11.43□□□□□ -0.58
CLK4-210ENST00000522136 FOXJ3Q9UPW0 622 aa11.43□□□□□ -0.58
CLK4-210ENST00000522136 HELZ2Q9BYK8 2649 aaKnown RBP11.43□□□□□ -0.58
CLK4-210ENST00000522136 SULT1B1O43704 296 aa11.43□□□□□ -0.58
CLK4-210ENST00000522136 CST4P01036 141 aa11.43□□□□□ -0.58
CLK4-210ENST00000522136 ATF1P18846 271 aa11.43□□□□□ -0.58
CLK4-210ENST00000522136 RAB3AP20336 220 aa11.43□□□□□ -0.58
CLK4-210ENST00000522136 PPP3R1P63098 170 aa11.43□□□□□ -0.58
CLK4-210ENST00000522136 ZBTB37Q5TC79 503 aa11.43□□□□□ -0.58
CLK4-210ENST00000522136 PLCXD3Q63HM9 321 aa11.43□□□□□ -0.58
CLK4-210ENST00000522136 USP43Q70EL4 1123 aa11.43□□□□□ -0.58
CLK4-210ENST00000522136 UTS2BQ765I0 119 aa11.43□□□□□ -0.58
CLK4-210ENST00000522136 OR52N4Q8NGI2 321 aa11.43□□□□□ -0.58
CLK4-210ENST00000522136 PIGTQ969N2 578 aa11.43□□□□□ -0.58
CLK4-210ENST00000522136 DCUN1D5Q9BTE7 237 aa11.43□□□□□ -0.58
CLK4-210ENST00000522136 FGF23Q9GZV9 251 aaPredicted RBP11.43□□□□□ -0.58
CLK4-210ENST00000522136 SLITRK2Q9H156 845 aa11.43□□□□□ -0.58
CLK4-210ENST00000522136 TENM4Q6N022 2769 aa11.43□□□□□ -0.58
CLK4-210ENST00000522136 UTP20O75691 2785 aaKnown RBP11.42□□□□□ -0.58
CLK4-210ENST00000522136 ZNF182P17025 639 aaPredicted RBP11.42□□□□□ -0.58
CLK4-210ENST00000522136 SERPINF1P36955 418 aa11.42□□□□□ -0.58
CLK4-210ENST00000522136 ALDH3B1P43353 468 aa11.42□□□□□ -0.58
CLK4-210ENST00000522136 PLK3Q9H4B4 646 aa11.42□□□□□ -0.58
CLK4-210ENST00000522136 MRPL15Q9P015 296 aaKnown RBP11.42□□□□□ -0.58
CLK4-210ENST00000522136 CGGBP1Q9UFW8 167 aaPredicted RBP11.42□□□□□ -0.58
CLK4-210ENST00000522136 A0A0G2JK05 382 aa11.41□□□□□ -0.58
CLK4-210ENST00000522136 TRIM64BA6NI03 449 aa11.41□□□□□ -0.58
CLK4-210ENST00000522136 IL1AP01583 271 aa11.41□□□□□ -0.58
CLK4-210ENST00000522136 RAB3BP20337 219 aa11.41□□□□□ -0.58
CLK4-210ENST00000522136 AZGP1P25311 298 aaKnown RBP11.41□□□□□ -0.58
CLK4-210ENST00000522136 BDKRB2P30411 391 aa11.41□□□□□ -0.58
CLK4-210ENST00000522136 APOBEC3AP31941 199 aaPredicted RBP11.41□□□□□ -0.58
CLK4-210ENST00000522136 MMP15P51511 669 aa11.41□□□□□ -0.58
CLK4-210ENST00000522136 SELENOVP59797 346 aa11.41□□□□□ -0.58
CLK4-210ENST00000522136 MST1LQ2TV78 715 aa11.41□□□□□ -0.58
CLK4-210ENST00000522136 CNPY1Q3B7I2 92 aa11.41□□□□□ -0.58
CLK4-210ENST00000522136 KRT74Q7RTS7 529 aa11.41□□□□□ -0.58
CLK4-210ENST00000522136 ZDHHC23Q8IYP9 409 aa11.41□□□□□ -0.58
CLK4-210ENST00000522136 FTMTQ8N4E7 242 aa11.41□□□□□ -0.58
CLK4-210ENST00000522136 OR10AD1Q8NGE0 317 aa11.41□□□□□ -0.58
CLK4-210ENST00000522136 DYNC2LI1Q8TCX1 351 aa11.41□□□□□ -0.58
CLK4-210ENST00000522136 HPSE2Q8WWQ2 592 aa11.41□□□□□ -0.58
CLK4-210ENST00000522136 DHRS9Q9BPW9 319 aa11.41□□□□□ -0.58
CLK4-210ENST00000522136 BARHL1Q9BZE3 327 aa11.41□□□□□ -0.58
CLK4-210ENST00000522136 TMEM138Q9NPI0 162 aa11.41□□□□□ -0.58
CLK4-210ENST00000522136 TMEM100Q9NV29 134 aa11.41□□□□□ -0.58
CLK4-210ENST00000522136 ARFGEF3Q5TH69 2177 aa11.41□□□□□ -0.58
CLK4-210ENST00000522136 IGHV3-64DA0A0J9YX35 117 aa11.41□□□□□ -0.58
CLK4-210ENST00000522136 FAM230AA0A1W2PPH8 454 aa11.41□□□□□ -0.58
CLK4-210ENST00000522136 ZSCAN5BA6NJL1 495 aa11.41□□□□□ -0.58
CLK4-210ENST00000522136 MLNRO43193 412 aa11.41□□□□□ -0.58
CLK4-210ENST00000522136 HCKP08631 526 aa11.41□□□□□ -0.58
CLK4-210ENST00000522136 OCMP0CE72 109 aaPredicted RBP11.41□□□□□ -0.58
CLK4-210ENST00000522136 HNRNPA0Q13151 305 aaKnown RBP11.41□□□□□ -0.58
CLK4-210ENST00000522136 NKPD1Q17RQ9 610 aa11.41□□□□□ -0.58
CLK4-210ENST00000522136 DDI2Q5TDH0 399 aa11.41□□□□□ -0.58
CLK4-210ENST00000522136 TPRA1Q86W33 373 aa11.41□□□□□ -0.58
CLK4-210ENST00000522136 ITFG2Q969R8 447 aa11.41□□□□□ -0.58
CLK4-210ENST00000522136 RFT1Q96AA3 541 aa11.41□□□□□ -0.58
CLK4-210ENST00000522136 ITPKCQ96DU7 683 aa11.41□□□□□ -0.58
CLK4-210ENST00000522136 MPC1Q9Y5U8 109 aa11.41□□□□□ -0.58
CLK4-210ENST00000522136 USP9YO00507 2555 aaPredicted RBP11.4□□□□□ -0.58
CLK4-210ENST00000522136 IGKV1-27A0A075B6S5 117 aa11.4□□□□□ -0.58
CLK4-210ENST00000522136 ANXA2P2A6NMY6 339 aa11.4□□□□□ -0.58
CLK4-210ENST00000522136 VSTM5A8MXK1 200 aa11.4□□□□□ -0.58
CLK4-210ENST00000522136 SLC2A2P11168 524 aaPredicted RBP11.4□□□□□ -0.58
CLK4-210ENST00000522136 NAT2P11245 290 aa11.4□□□□□ -0.58
CLK4-210ENST00000522136 COX6B1P14854 86 aa11.4□□□□□ -0.58
CLK4-210ENST00000522136 THBS2P35442 1172 aa11.4□□□□□ -0.58
CLK4-210ENST00000522136 GPM6AP51674 278 aa11.4□□□□□ -0.58
CLK4-210ENST00000522136 OR8G1Q15617 311 aa11.4□□□□□ -0.58
CLK4-210ENST00000522136 CRIP3Q6Q6R5 217 aa11.4□□□□□ -0.58
CLK4-210ENST00000522136 ZCCHC24Q8N2G6 241 aaKnown RBP11.4□□□□□ -0.58
CLK4-210ENST00000522136 OR5P3Q8WZ94 311 aa11.4□□□□□ -0.58
CLK4-210ENST00000522136 RNF170Q96K19 258 aa11.4□□□□□ -0.58
CLK4-210ENST00000522136 ADAT1Q9BUB4 502 aaKnown RBP11.4□□□□□ -0.58
CLK4-210ENST00000522136 V9GY05 133 aa11.4□□□□□ -0.58
CLK4-210ENST00000522136 CACNA1DQ01668 2161 aa11.4□□□□□ -0.58
CLK4-210ENST00000522136 HRNRQ86YZ3 2850 aaPredicted RBP11.4□□□□□ -0.58
CLK4-210ENST00000522136 CHD3Q12873 2000 aaKnown RBP11.4□□□□□ -0.58
CLK4-210ENST00000522136 PLSCR5A0PG75 271 aa11.39□□□□□ -0.59
CLK4-210ENST00000522136 FAM221AA4D161 298 aa11.39□□□□□ -0.59
CLK4-210ENST00000522136 F5H5P2 479 aa11.39□□□□□ -0.59
CLK4-210ENST00000522136 PDCD5O14737 125 aa11.39□□□□□ -0.59
CLK4-210ENST00000522136 HS3ST1O14792 307 aa11.39□□□□□ -0.59
CLK4-210ENST00000522136 SPRY3O43610 288 aa11.39□□□□□ -0.59
CLK4-210ENST00000522136 CTAG2O75638 210 aa11.39□□□□□ -0.59
CLK4-210ENST00000522136 PRF1P14222 555 aa11.39□□□□□ -0.59
CLK4-210ENST00000522136 CNN3Q15417 329 aaKnown RBP11.39□□□□□ -0.59
CLK4-210ENST00000522136 CEACAM21Q3KPI0 293 aa11.39□□□□□ -0.59
CLK4-210ENST00000522136 HES5Q5TA89 166 aa11.39□□□□□ -0.59
CLK4-210ENST00000522136 JAGN1Q8N5M9 183 aa11.39□□□□□ -0.59
CLK4-210ENST00000522136 OR2Z1Q8NG97 314 aa11.39□□□□□ -0.59
CLK4-210ENST00000522136 OR13G1Q8NGZ3 307 aa11.39□□□□□ -0.59
CLK4-210ENST00000522136 OR8S1Q8NH09 359 aa11.39□□□□□ -0.59
CLK4-210ENST00000522136 FBXW5Q969U6 566 aa11.39□□□□□ -0.59
CLK4-210ENST00000522136 SLC25A46Q96AG3 418 aa11.39□□□□□ -0.59
CLK4-210ENST00000522136 HIST1H2AAQ96QV6 131 aa11.39□□□□□ -0.59
CLK4-210ENST00000522136 SLC7A11Q9UPY5 501 aa11.39□□□□□ -0.59
CLK4-210ENST00000522136 A0A0B4J203 849 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms