RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 OCLNQ16625 522 aa16.17■□□□□ 0.18
PABPC1-215ENST00000520804 ATPAF1Q5TC12 328 aaPredicted RBP16.17■□□□□ 0.18
PABPC1-215ENST00000520804 PLBD1Q6P4A8 553 aa16.17■□□□□ 0.18
PABPC1-215ENST00000520804 METAP1DQ6UB28 335 aaPredicted RBP16.17■□□□□ 0.18
PABPC1-215ENST00000520804 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.17■□□□□ 0.18
PABPC1-215ENST00000520804 ZNF454Q8N9F8 522 aa16.17■□□□□ 0.18
PABPC1-215ENST00000520804 OTOSQ8NHW6 89 aa16.17■□□□□ 0.18
PABPC1-215ENST00000520804 ASB9Q96DX5 294 aa16.17■□□□□ 0.18
PABPC1-215ENST00000520804 LRGUKQ96M69 825 aa16.17■□□□□ 0.18
PABPC1-215ENST00000520804 RTL8AQ9BWD3 113 aa16.17■□□□□ 0.18
PABPC1-215ENST00000520804 CHID1Q9BWS9 393 aa16.17■□□□□ 0.18
PABPC1-215ENST00000520804 ABCB9Q9NP78 766 aa16.17■□□□□ 0.18
PABPC1-215ENST00000520804 HAO2Q9NYQ3 351 aa16.17■□□□□ 0.18
PABPC1-215ENST00000520804 ONECUT1Q9UBC0 465 aa16.17■□□□□ 0.18
PABPC1-215ENST00000520804 TMEM210A6NLX4 147 aa16.16■□□□□ 0.18
PABPC1-215ENST00000520804 PRR23D1E9PI22 279 aaPredicted RBP16.16■□□□□ 0.18
PABPC1-215ENST00000520804 SELENOFO60613 162 aa16.16■□□□□ 0.18
PABPC1-215ENST00000520804 CST4P01036 141 aa16.16■□□□□ 0.18
PABPC1-215ENST00000520804 CST1P01037 141 aa16.16■□□□□ 0.18
PABPC1-215ENST00000520804 PRR23D2P0DMB1 279 aaPredicted RBP16.16■□□□□ 0.18
PABPC1-215ENST00000520804 CALB2P22676 271 aa16.16■□□□□ 0.18
PABPC1-215ENST00000520804 ACKR3P25106 362 aa16.16■□□□□ 0.18
PABPC1-215ENST00000520804 DEFA6Q01524 100 aa16.16■□□□□ 0.18
PABPC1-215ENST00000520804 PRDX4Q13162 271 aa16.16■□□□□ 0.18
PABPC1-215ENST00000520804 IKZF1Q13422 519 aa16.16■□□□□ 0.18
PABPC1-215ENST00000520804 GINS1Q14691 196 aa16.16■□□□□ 0.18
PABPC1-215ENST00000520804 BRICD5Q6PL45 260 aa16.16■□□□□ 0.18
PABPC1-215ENST00000520804 CMTM4Q8IZR5 234 aa16.16■□□□□ 0.18
PABPC1-215ENST00000520804 OR5T2Q8NGG2 359 aa16.16■□□□□ 0.18
PABPC1-215ENST00000520804 OR10Z1Q8NGY1 313 aa16.16■□□□□ 0.18
PABPC1-215ENST00000520804 THEM6Q8WUY1 208 aa16.16■□□□□ 0.18
PABPC1-215ENST00000520804 OR5P3Q8WZ94 311 aa16.16■□□□□ 0.18
PABPC1-215ENST00000520804 RPL3LQ92901 407 aaKnown RBP16.16■□□□□ 0.18
PABPC1-215ENST00000520804 DCTN5Q9BTE1 182 aa16.16■□□□□ 0.18
PABPC1-215ENST00000520804 DNTTIP1Q9H147 329 aa16.16■□□□□ 0.18
PABPC1-215ENST00000520804 ZNF850A8MQ14 1090 aa16.15■□□□□ 0.18
PABPC1-215ENST00000520804 POU1F1P28069 291 aa16.15■□□□□ 0.18
PABPC1-215ENST00000520804 GMFBP60983 142 aa16.15■□□□□ 0.18
PABPC1-215ENST00000520804 LRRC10Q5BKY1 277 aa16.15■□□□□ 0.18
PABPC1-215ENST00000520804 FAM76BQ5HYJ3 339 aa16.15■□□□□ 0.18
PABPC1-215ENST00000520804 TMEM179BQ7Z7N9 219 aa16.15■□□□□ 0.18
PABPC1-215ENST00000520804 ADGRG5Q8IZF4 528 aa16.15■□□□□ 0.18
PABPC1-215ENST00000520804 C8orf46Q8TAG6 207 aa16.15■□□□□ 0.18
PABPC1-215ENST00000520804 NPRL2Q8WTW4 380 aa16.15■□□□□ 0.18
PABPC1-215ENST00000520804 CCDC124Q96CT7 223 aaKnown RBP16.15■□□□□ 0.18
PABPC1-215ENST00000520804 LYZL4Q96KX0 146 aa16.15■□□□□ 0.18
PABPC1-215ENST00000520804 RAB3IPQ96QF0 476 aaPredicted RBP16.15■□□□□ 0.18
PABPC1-215ENST00000520804 CCT8L2Q96SF2 557 aa16.15■□□□□ 0.18
PABPC1-215ENST00000520804 PKP2Q99959 881 aa16.15■□□□□ 0.18
PABPC1-215ENST00000520804 FGF23Q9GZV9 251 aaPredicted RBP16.15■□□□□ 0.18
PABPC1-215ENST00000520804 WDR13Q9H1Z4 485 aa16.15■□□□□ 0.18
PABPC1-215ENST00000520804 DPAGT1Q9H3H5 408 aa16.15■□□□□ 0.18
PABPC1-215ENST00000520804 SIRT7Q9NRC8 400 aa16.15■□□□□ 0.18
PABPC1-215ENST00000520804 SNTG1Q9NSN8 517 aa16.15■□□□□ 0.18
PABPC1-215ENST00000520804 DNAJB11Q9UBS4 358 aa16.15■□□□□ 0.18
PABPC1-215ENST00000520804 FAM96BQ9Y3D0 163 aa16.15■□□□□ 0.18
PABPC1-215ENST00000520804 RNF114Q9Y508 228 aa16.15■□□□□ 0.18
PABPC1-215ENST00000520804 PRODHO43272 600 aa16.14■□□□□ 0.17
PABPC1-215ENST00000520804 T-ENOLP0DO92 83 aa16.14■□□□□ 0.17
PABPC1-215ENST00000520804 SELLP14151 372 aa16.14■□□□□ 0.17
PABPC1-215ENST00000520804 KRTAP10-3P60369 221 aa16.14■□□□□ 0.17
PABPC1-215ENST00000520804 PSMA6P60900 246 aaKnown RBP16.14■□□□□ 0.17
PABPC1-215ENST00000520804 GUCA2AQ02747 115 aa16.14■□□□□ 0.17
PABPC1-215ENST00000520804 PDLIM3Q53GG5 364 aaPredicted RBP16.14■□□□□ 0.17
PABPC1-215ENST00000520804 ZNF788Q6ZQV5 615 aa16.14■□□□□ 0.17
PABPC1-215ENST00000520804 Q8N7P7 452 aa16.14■□□□□ 0.17
PABPC1-215ENST00000520804 LINC01006Q8NI28 216 aa16.14■□□□□ 0.17
PABPC1-215ENST00000520804 HPSE2Q8WWQ2 592 aa16.14■□□□□ 0.17
PABPC1-215ENST00000520804 LRTOMTQ8WZ04 291 aa16.14■□□□□ 0.17
PABPC1-215ENST00000520804 PIGCQ92535 297 aa16.14■□□□□ 0.17
PABPC1-215ENST00000520804 RNF170Q96K19 258 aa16.14■□□□□ 0.17
PABPC1-215ENST00000520804 CLPTM1LQ96KA5 538 aa16.14■□□□□ 0.17
PABPC1-215ENST00000520804 ZNF391Q9UJN7 358 aa16.14■□□□□ 0.17
PABPC1-215ENST00000520804 KLHDC2Q9Y2U9 406 aa16.14■□□□□ 0.17
PABPC1-215ENST00000520804 CAB39Q9Y376 341 aaPredicted RBP16.14■□□□□ 0.17
PABPC1-215ENST00000520804 NKX6-3A6NJ46 265 aa16.13■□□□□ 0.17
PABPC1-215ENST00000520804 RNASEK-C17orf49H0YIS7 233 aa16.13■□□□□ 0.17
PABPC1-215ENST00000520804 HMGN1P05114 100 aa16.13■□□□□ 0.17
PABPC1-215ENST00000520804 FBP1P09467 338 aa16.13■□□□□ 0.17
PABPC1-215ENST00000520804 OSMP13725 252 aa16.13■□□□□ 0.17
PABPC1-215ENST00000520804 CDK5Q00535 292 aa16.13■□□□□ 0.17
PABPC1-215ENST00000520804 PRB3Q04118 309 aaPredicted RBP16.13■□□□□ 0.17
PABPC1-215ENST00000520804 GDPGP1Q6ZNW5 385 aa16.13■□□□□ 0.17
PABPC1-215ENST00000520804 KCTD8Q6ZWB6 473 aa16.13■□□□□ 0.17
PABPC1-215ENST00000520804 CPOQ8IVL8 374 aa16.13■□□□□ 0.17
PABPC1-215ENST00000520804 ZDHHC23Q8IYP9 409 aa16.13■□□□□ 0.17
PABPC1-215ENST00000520804 OR8B12Q8NGG6 310 aa16.13■□□□□ 0.17
PABPC1-215ENST00000520804 H1FXQ92522 213 aaKnown RBP16.13■□□□□ 0.17
PABPC1-215ENST00000520804 GAFA1Q96PS6 74 aa16.13■□□□□ 0.17
PABPC1-215ENST00000520804 SEMA6AQ9H2E6 1030 aa16.13■□□□□ 0.17
PABPC1-215ENST00000520804 NIPAL2Q9H841 368 aa16.13■□□□□ 0.17
PABPC1-215ENST00000520804 TAS2R1Q9NYW7 299 aa16.13■□□□□ 0.17
PABPC1-215ENST00000520804 ZNRD1Q9P1U0 126 aa16.13■□□□□ 0.17
PABPC1-215ENST00000520804 GNGT2O14610 69 aa16.12■□□□□ 0.17
PABPC1-215ENST00000520804 TIMM23O14925 209 aa16.12■□□□□ 0.17
PABPC1-215ENST00000520804 AKR7A2O43488 359 aa16.12■□□□□ 0.17
PABPC1-215ENST00000520804 CLPXO76031 633 aa16.12■□□□□ 0.17
PABPC1-215ENST00000520804 DCTDP32321 178 aa16.12■□□□□ 0.17
PABPC1-215ENST00000520804 PROK1P58294 105 aa16.12■□□□□ 0.17
PABPC1-215ENST00000520804 TAF9Q16594 264 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms