RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 SNTB2Q13425 540 aaKnown RBP4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 GINS1Q14691 196 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 KCNMB1Q16558 191 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 NKPD1Q17RQ9 610 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 MESTQ5EB52 335 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 NHLRC3Q5JS37 347 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 BCL2L15Q5TBC7 163 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 RGS7BPQ6MZT1 257 aaPredicted RBP4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 SLC18B1Q6NT16 456 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 SLC25A47Q6Q0C1 308 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 BAIAP2L2Q6UXY1 529 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 FOXL2NBQ6ZUU3 175 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 CXXC5Q7LFL8 322 aaKnown RBP4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 FAM122BQ7Z309 247 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 HSD17B13Q7Z5P4 300 aaPredicted RBP4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 PEG10Q86TG7 708 aaKnown RBP4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 MDP1Q86V88 176 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 LURAP1LQ8IV03 231 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 TIGD4Q8IY51 512 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 LRRC18Q8N456 261 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 MS4A15Q8N5U1 240 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 SDR9C7Q8NEX9 313 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 OR5T2Q8NGG2 359 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 OR4K13Q8NH42 304 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 LILRB1Q8NHL6 650 aaPredicted RBP4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 SMAP2Q8WU79 429 aaPredicted RBP4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 APOBEC3DQ96AK3 386 aaPredicted RBP4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 ZNF524Q96C55 264 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 RASD2Q96D21 266 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 RNFT2Q96EX2 444 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 NMNAT3Q96T66 252 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 CNN2Q99439 309 aaKnown RBP4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 TMEM204Q9BSN7 226 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 THAP7Q9BT49 309 aaPredicted RBP4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 ZNF436Q9C0F3 470 aaPredicted RBP4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 ABCG5Q9H222 651 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 PLK3Q9H4B4 646 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 RGCCQ9H4X1 137 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 EGLN3Q9H6Z9 239 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 MOB1AQ9H8S9 216 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 SRA1Q9HD15 236 aaKnown RBP4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 IFT46Q9NQC8 304 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 CA10Q9NS85 328 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 SDHAF2Q9NX18 166 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 RDH8Q9NYR8 311 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 NKIRAS2Q9NYR9 191 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 TVP23BQ9NYZ1 205 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 EXTL2Q9UBQ6 330 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 ST6GALNAC2Q9UJ37 374 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 LAMP5Q9UJQ1 280 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 ZNF222Q9UK12 451 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 EXOGQ9Y2C4 368 aaKnown RBP4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 PCNX1Q96RV3 2341 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 MED12LQ86YW9 2145 aa4.9□□□□□ -1.63
CTNNA1-220ENST00000520260 FLNBO75369 2602 aaKnown RBP4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 SHISA3A0PJX4 238 aa4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 FAM221AA4D161 298 aa4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 C5orf49A4QMS7 147 aa4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 ACOD1A6NK06 481 aa4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 MPTX1A8MV57 137 aa4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 DEFB108AA8MXU0 73 aa4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 G3V3Q6 166 aa4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 M0R233 179 aa4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 NDUFS8O00217 210 aa4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 TSPAN4O14817 238 aa4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 CTDSPLO15194 276 aa4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 SIAH2O43255 324 aa4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 XRCC2O43543 280 aa4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 SYNGR3O43761 229 aa4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 ZNF254O75437 659 aa4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 RGS9O75916 674 aaPredicted RBP4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 IGFBP1P08833 259 aaPredicted RBP4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 FGF2P09038 288 aa4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 SPARCP09486 303 aa4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 TACSTD2P09758 323 aa4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 H2BFMP0C1H6 154 aa4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 H2AFB2P0C5Z0 115 aa4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 CECR9P0C854 216 aa4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 RNF224P0DH78 156 aa4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 SPI1P17947 270 aa4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 KLK2P20151 261 aa4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 RAB3AP20336 220 aa4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 THBS2P35442 1172 aa4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 GLRXP35754 106 aa4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 CBX5P45973 191 aa4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 SLC6A9P48067 706 aa4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 PITPNBP48739 271 aa4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 PPOXP50336 477 aa4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 ZNF81P51508 661 aa4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 CAV3P56539 151 aa4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 ACTA2P62736 377 aa4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 ACTG2P63267 376 aa4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 PITPNAQ00169 270 aa4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 DYRK1AQ13627 763 aa4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 OPCMLQ14982 345 aa4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 TRAM1Q15629 374 aa4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 EFNB3Q15768 340 aa4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 DEFB113Q30KQ7 82 aa4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 PABPC1L2AQ5JQF8 200 aa4.89□□□□□ -1.63
CTNNA1-220ENST00000520260 TEX30Q5JUR7 227 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms