RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-223	ENST00000515459	MICU1	Q9BPX6	476 aa		12.82	□□□□□ -0.36
LMNA-223	ENST00000515459	PPP1R3E	Q9H7J1	279 aa		12.82	□□□□□ -0.36
LMNA-223	ENST00000515459	SP140L	Q9H930	580 aa		12.82	□□□□□ -0.36
LMNA-223	ENST00000515459	EFCAB1	Q9HAE3	211 aa		12.82	□□□□□ -0.36
LMNA-223	ENST00000515459	CD300A	Q9UGN4	299 aa		12.82	□□□□□ -0.36
LMNA-223	ENST00000515459	NOTCH3	Q9UM47	2321 aa		12.81	□□□□□ -0.36
LMNA-223	ENST00000515459	hCG_38984	A0A1B0GV85	526 aa		12.81	□□□□□ -0.36
LMNA-223	ENST00000515459		H0YAE9	185 aa		12.81	□□□□□ -0.36
LMNA-223	ENST00000515459	ZNF593	O00488	134 aa	Predicted RBP	12.81	□□□□□ -0.36
LMNA-223	ENST00000515459	ANGPTL7	O43827	346 aa		12.81	□□□□□ -0.36
LMNA-223	ENST00000515459	FBXO24	O75426	580 aa		12.81	□□□□□ -0.36
LMNA-223	ENST00000515459	ACAA1	P09110	424 aa	Predicted RBP	12.81	□□□□□ -0.36
LMNA-223	ENST00000515459	CFL1	P23528	166 aa	Known RBP	12.81	□□□□□ -0.36
LMNA-223	ENST00000515459	HSD11B1	P28845	292 aa		12.81	□□□□□ -0.36
LMNA-223	ENST00000515459	FMO3	P31513	532 aa		12.81	□□□□□ -0.36
LMNA-223	ENST00000515459	GSK3A	P49840	483 aa		12.81	□□□□□ -0.36
LMNA-223	ENST00000515459	TSPAN31	Q12999	210 aa		12.81	□□□□□ -0.36
LMNA-223	ENST00000515459	SNCB	Q16143	134 aa		12.81	□□□□□ -0.36
LMNA-223	ENST00000515459	VAX1	Q5SQQ9	334 aa		12.81	□□□□□ -0.36
LMNA-223	ENST00000515459	LIAT1	Q6ZQX7	453 aa		12.81	□□□□□ -0.36
LMNA-223	ENST00000515459	FTMT	Q8N4E7	242 aa		12.81	□□□□□ -0.36
LMNA-223	ENST00000515459	OR52H1	Q8NGJ2	320 aa		12.81	□□□□□ -0.36
LMNA-223	ENST00000515459	ANGPTL6	Q8NI99	470 aa		12.81	□□□□□ -0.36
LMNA-223	ENST00000515459	PHF21A	Q96BD5	680 aa		12.81	□□□□□ -0.36
LMNA-223	ENST00000515459	RTL8A	Q9BWD3	113 aa		12.81	□□□□□ -0.36
LMNA-223	ENST00000515459	MMP28	Q9H239	520 aa		12.81	□□□□□ -0.36
LMNA-223	ENST00000515459	EGLN3	Q9H6Z9	239 aa		12.81	□□□□□ -0.36
LMNA-223	ENST00000515459	RHBDD3	Q9Y3P4	386 aa		12.81	□□□□□ -0.36
LMNA-223	ENST00000515459	TMEM210	A6NLX4	147 aa		12.8	□□□□□ -0.36
LMNA-223	ENST00000515459	SIGLEC5	O15389	551 aa		12.8	□□□□□ -0.36
LMNA-223	ENST00000515459	CHST1	O43916	411 aa		12.8	□□□□□ -0.36
LMNA-223	ENST00000515459	GMNN	O75496	209 aa		12.8	□□□□□ -0.36
LMNA-223	ENST00000515459	APOC1	P02654	83 aa		12.8	□□□□□ -0.36
LMNA-223	ENST00000515459	TFF1	P04155	84 aa		12.8	□□□□□ -0.36
LMNA-223	ENST00000515459	NUDT2	P50583	147 aa		12.8	□□□□□ -0.36
LMNA-223	ENST00000515459	MXRA7	P84157	204 aa		12.8	□□□□□ -0.36
LMNA-223	ENST00000515459	GFOD2	Q3B7J2	385 aa		12.8	□□□□□ -0.36
LMNA-223	ENST00000515459	KLHL12	Q53G59	568 aa		12.8	□□□□□ -0.36
LMNA-223	ENST00000515459	TEX30	Q5JUR7	227 aa		12.8	□□□□□ -0.36
LMNA-223	ENST00000515459	RPL13AP3	Q6NVV1	102 aa		12.8	□□□□□ -0.36
LMNA-223	ENST00000515459	HACD2	Q6Y1H2	254 aa		12.8	□□□□□ -0.36
LMNA-223	ENST00000515459	CPLX4	Q7Z7G2	160 aa		12.8	□□□□□ -0.36
LMNA-223	ENST00000515459	ZNF511	Q8NB15	262 aa		12.8	□□□□□ -0.36
LMNA-223	ENST00000515459	OR4F17	Q8NGA8	305 aa		12.8	□□□□□ -0.36
LMNA-223	ENST00000515459	GNPDA2	Q8TDQ7	276 aa		12.8	□□□□□ -0.36
LMNA-223	ENST00000515459	RPL3L	Q92901	407 aa	Known RBP	12.8	□□□□□ -0.36
LMNA-223	ENST00000515459	R3HDM4	Q96D70	268 aa		12.8	□□□□□ -0.36
LMNA-223	ENST00000515459	AJUBA	Q96IF1	538 aa		12.8	□□□□□ -0.36
LMNA-223	ENST00000515459	OR4F4	Q96R69	305 aa		12.8	□□□□□ -0.36
LMNA-223	ENST00000515459	ABCD2	Q9UBJ2	740 aa		12.8	□□□□□ -0.36
LMNA-223	ENST00000515459	MPC1	Q9Y5U8	109 aa		12.8	□□□□□ -0.36
LMNA-223	ENST00000515459		V9GYQ6	96 aa		12.8	□□□□□ -0.36
LMNA-223	ENST00000515459	TRBV23-1	A0A0A0MS06	115 aa		12.79	□□□□□ -0.36
LMNA-223	ENST00000515459	DHRS12	A0PJE2	317 aa		12.79	□□□□□ -0.36
LMNA-223	ENST00000515459	AKR7A2	O43488	359 aa		12.79	□□□□□ -0.36
LMNA-223	ENST00000515459	CD28	P10747	220 aa		12.79	□□□□□ -0.36
LMNA-223	ENST00000515459	GABRA2	P47869	451 aa		12.79	□□□□□ -0.36
LMNA-223	ENST00000515459	FAM57B	Q71RH2	274 aa		12.79	□□□□□ -0.36
LMNA-223	ENST00000515459	NDUFA11	Q86Y39	141 aa		12.79	□□□□□ -0.36
LMNA-223	ENST00000515459	SLC37A3	Q8NCC5	494 aa		12.79	□□□□□ -0.36
LMNA-223	ENST00000515459	PYURF	Q96I23	114 aa		12.79	□□□□□ -0.36
LMNA-223	ENST00000515459	NKX3-1	Q99801	234 aa	Predicted RBP	12.79	□□□□□ -0.36
LMNA-223	ENST00000515459	ELL3	Q9HB65	397 aa	Predicted RBP	12.79	□□□□□ -0.36
LMNA-223	ENST00000515459	NLK	Q9UBE8	527 aa		12.79	□□□□□ -0.36
LMNA-223	ENST00000515459	CDH10	Q9Y6N8	788 aa		12.79	□□□□□ -0.36
LMNA-223	ENST00000515459	MEGF11	A6BM72	1044 aa		12.78	□□□□□ -0.36
LMNA-223	ENST00000515459	OR2AT4	A6NND4	320 aa		12.78	□□□□□ -0.36
LMNA-223	ENST00000515459	SEMG1	P04279	462 aa		12.78	□□□□□ -0.36
LMNA-223	ENST00000515459	GYPB	P06028	91 aa		12.78	□□□□□ -0.36
LMNA-223	ENST00000515459	GLRA1	P23415	457 aa		12.78	□□□□□ -0.36
LMNA-223	ENST00000515459	PAX6	P26367	422 aa		12.78	□□□□□ -0.36
LMNA-223	ENST00000515459	RRM2	P31350	389 aa		12.78	□□□□□ -0.36
LMNA-223	ENST00000515459	ZNF121	P58317	390 aa	Predicted RBP	12.78	□□□□□ -0.36
LMNA-223	ENST00000515459	PSME3	P61289	254 aa		12.78	□□□□□ -0.36
LMNA-223	ENST00000515459	PRDX4	Q13162	271 aa		12.78	□□□□□ -0.36
LMNA-223	ENST00000515459	EIF2B1	Q14232	305 aa	Known RBP	12.78	□□□□□ -0.36
LMNA-223	ENST00000515459	FOXB2	Q5VYV0	432 aa		12.78	□□□□□ -0.36
LMNA-223	ENST00000515459	KCTD8	Q6ZWB6	473 aa		12.78	□□□□□ -0.36
LMNA-223	ENST00000515459	PRSS45	Q7RTY3	260 aa		12.78	□□□□□ -0.36
LMNA-223	ENST00000515459	HDX	Q7Z353	690 aa		12.78	□□□□□ -0.36
LMNA-223	ENST00000515459	FAM185A	Q8N0U4	392 aa		12.78	□□□□□ -0.36
LMNA-223	ENST00000515459	TMEM185A	Q8NFB2	350 aa		12.78	□□□□□ -0.36
LMNA-223	ENST00000515459	OR5P3	Q8WZ94	311 aa		12.78	□□□□□ -0.36
LMNA-223	ENST00000515459	MCUR1	Q96AQ8	359 aa		12.78	□□□□□ -0.36
LMNA-223	ENST00000515459	OR10A2	Q9H208	303 aa		12.78	□□□□□ -0.36
LMNA-223	ENST00000515459	RGCC	Q9H4X1	137 aa		12.78	□□□□□ -0.36
LMNA-223	ENST00000515459	ZNF702P	Q9H963	129 aa		12.78	□□□□□ -0.36
LMNA-223	ENST00000515459	ABCB9	Q9NP78	766 aa		12.78	□□□□□ -0.36
LMNA-223	ENST00000515459	SERTAD4	Q9NUC0	356 aa		12.78	□□□□□ -0.36
LMNA-223	ENST00000515459	DNAJC27	Q9NZQ0	273 aa		12.78	□□□□□ -0.36
LMNA-223	ENST00000515459	ZNF319	Q9P2F9	582 aa		12.78	□□□□□ -0.36
LMNA-223	ENST00000515459	ZNF850	A8MQ14	1090 aa		12.77	□□□□□ -0.37
LMNA-223	ENST00000515459	GLCE	O94923	617 aa		12.77	□□□□□ -0.37
LMNA-223	ENST00000515459	SPI1	P17947	270 aa		12.77	□□□□□ -0.37
LMNA-223	ENST00000515459	BMX	P51813	675 aa		12.77	□□□□□ -0.37
LMNA-223	ENST00000515459	BLVRA	P53004	296 aa		12.77	□□□□□ -0.37
LMNA-223	ENST00000515459	CRMP1	Q14194	572 aa		12.77	□□□□□ -0.37
LMNA-223	ENST00000515459	HABP2	Q14520	560 aa	Predicted RBP	12.77	□□□□□ -0.37
LMNA-223	ENST00000515459	FAM76B	Q5HYJ3	339 aa		12.77	□□□□□ -0.37
LMNA-223	ENST00000515459	ZBTB37	Q5TC79	503 aa		12.77	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms