RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 PHOX2AO14813 284 aa9.52□□□□□ -0.89
NEK1-206ENST00000510533 PPM1DO15297 605 aa9.52□□□□□ -0.89
NEK1-206ENST00000510533 COX7A2P2O60397 106 aa9.52□□□□□ -0.89
NEK1-206ENST00000510533 TBX19O60806 448 aa9.52□□□□□ -0.89
NEK1-206ENST00000510533 ZBTB25P24278 435 aa9.52□□□□□ -0.89
NEK1-206ENST00000510533 RAG2P55895 527 aa9.52□□□□□ -0.89
NEK1-206ENST00000510533 PCBP3P57721 371 aaKnown RBP9.52□□□□□ -0.89
NEK1-206ENST00000510533 RANP62826 216 aaKnown RBP9.52□□□□□ -0.89
NEK1-206ENST00000510533 SMIM21Q3B7S5 101 aa9.52□□□□□ -0.89
NEK1-206ENST00000510533 WDR38Q5JTN6 314 aa9.52□□□□□ -0.89
NEK1-206ENST00000510533 SPSB1Q96BD6 273 aa9.52□□□□□ -0.89
NEK1-206ENST00000510533 TOLLIPQ9H0E2 274 aa9.52□□□□□ -0.89
NEK1-206ENST00000510533 TPPP2P59282 170 aa9.51□□□□□ -0.89
NEK1-206ENST00000510533 KRTDAPP60985 99 aa9.51□□□□□ -0.89
NEK1-206ENST00000510533 CEACAM16Q2WEN9 425 aa9.51□□□□□ -0.89
NEK1-206ENST00000510533 MIDNQ504T8 468 aa9.51□□□□□ -0.89
NEK1-206ENST00000510533 TMEM196Q5HYL7 178 aa9.51□□□□□ -0.89
NEK1-206ENST00000510533 FAM219BQ5XKK7 198 aa9.51□□□□□ -0.89
NEK1-206ENST00000510533 ADPRHL1Q8NDY3 354 aa9.51□□□□□ -0.89
NEK1-206ENST00000510533 APOBEC3DQ96AK3 386 aaPredicted RBP9.51□□□□□ -0.89
NEK1-206ENST00000510533 SPACA9Q96E40 222 aaPredicted RBP9.51□□□□□ -0.89
NEK1-206ENST00000510533 MMP26Q9NRE1 261 aa9.51□□□□□ -0.89
NEK1-206ENST00000510533 ANKRD36CQ5JPF3 1778 aa9.51□□□□□ -0.89
NEK1-206ENST00000510533 J3QR89 54 aa9.51□□□□□ -0.89
NEK1-206ENST00000510533 NKX2-2O95096 273 aa9.51□□□□□ -0.89
NEK1-206ENST00000510533 CCR2P41597 374 aa9.51□□□□□ -0.89
NEK1-206ENST00000510533 CNN1P51911 297 aaKnown RBP9.51□□□□□ -0.89
NEK1-206ENST00000510533 SSX1Q16384 188 aa9.51□□□□□ -0.89
NEK1-206ENST00000510533 OR1F12Q8NHA8 337 aa9.51□□□□□ -0.89
NEK1-206ENST00000510533 PELI1Q96FA3 418 aa9.51□□□□□ -0.89
NEK1-206ENST00000510533 RAB18Q9NP72 206 aa9.51□□□□□ -0.89
NEK1-206ENST00000510533 EXOGQ9Y2C4 368 aaKnown RBP9.51□□□□□ -0.89
NEK1-206ENST00000510533 LOXL2Q9Y4K0 774 aa9.51□□□□□ -0.89
NEK1-206ENST00000510533 LOXHD1Q8IVV2 1947 aa9.51□□□□□ -0.89
NEK1-206ENST00000510533 TMEM272A0A1B0GTI8 110 aa9.51□□□□□ -0.89
NEK1-206ENST00000510533 OR2W5A6NFC9 320 aa9.51□□□□□ -0.89
NEK1-206ENST00000510533 SEMG1P04279 462 aa9.51□□□□□ -0.89
NEK1-206ENST00000510533 PTHLHP12272 177 aa9.51□□□□□ -0.89
NEK1-206ENST00000510533 DSCR4P56555 118 aaPredicted RBP9.51□□□□□ -0.89
NEK1-206ENST00000510533 KIAA0040Q15053 153 aa9.51□□□□□ -0.89
NEK1-206ENST00000510533 MOGAT2Q3SYC2 334 aa9.51□□□□□ -0.89
NEK1-206ENST00000510533 ALKBH3Q96Q83 286 aaPredicted RBP9.51□□□□□ -0.89
NEK1-206ENST00000510533 FOXB1Q99853 325 aa9.51□□□□□ -0.89
NEK1-206ENST00000510533 EDEM2Q9BV94 578 aa9.51□□□□□ -0.89
NEK1-206ENST00000510533 MTFP1Q9UDX5 166 aa9.51□□□□□ -0.89
NEK1-206ENST00000510533 LAMA4Q16363 1823 aa9.51□□□□□ -0.89
NEK1-206ENST00000510533 PHIPQ8WWQ0 1821 aa9.51□□□□□ -0.89
NEK1-206ENST00000510533 CNTRLQ7Z7A1 2325 aa9.51□□□□□ -0.89
NEK1-206ENST00000510533 LILRA5A6NI73 299 aa9.51□□□□□ -0.89
NEK1-206ENST00000510533 CYC1P08574 325 aa9.51□□□□□ -0.89
NEK1-206ENST00000510533 GPM6AP51674 278 aa9.51□□□□□ -0.89
NEK1-206ENST00000510533 PPP1CBP62140 327 aa9.51□□□□□ -0.89
NEK1-206ENST00000510533 HLXQ14774 488 aaPredicted RBP9.51□□□□□ -0.89
NEK1-206ENST00000510533 RNF165Q6ZSG1 346 aa9.51□□□□□ -0.89
NEK1-206ENST00000510533 FBXL14Q8N1E6 418 aa9.51□□□□□ -0.89
NEK1-206ENST00000510533 KIAA1958Q8N8K9 716 aa9.51□□□□□ -0.89
NEK1-206ENST00000510533 TJP1Q07157 1748 aa9.51□□□□□ -0.89
NEK1-206ENST00000510533 SLC22A20A6NK97 555 aa9.5□□□□□ -0.89
NEK1-206ENST00000510533 FBP1P09467 338 aa9.5□□□□□ -0.89
NEK1-206ENST00000510533 DGAT2L6Q6ZPD8 337 aa9.5□□□□□ -0.89
NEK1-206ENST00000510533 ETFBKMTQ8IXQ9 262 aa9.5□□□□□ -0.89
NEK1-206ENST00000510533 NTNG2Q96CW9 530 aa9.5□□□□□ -0.89
NEK1-206ENST00000510533 UCK1Q9HA47 277 aa9.5□□□□□ -0.89
NEK1-206ENST00000510533 C20orf141Q9NUB4 165 aa9.5□□□□□ -0.89
NEK1-206ENST00000510533 CYB5R1Q9UHQ9 305 aa9.5□□□□□ -0.89
NEK1-206ENST00000510533 COL16A1Q07092 1604 aaPredicted RBP9.5□□□□□ -0.89
NEK1-206ENST00000510533 NOVA1P51513 510 aaKnown RBP9.5□□□□□ -0.89
NEK1-206ENST00000510533 WFDC8Q8IUA0 241 aa9.5□□□□□ -0.89
NEK1-206ENST00000510533 OR8D4Q8NGM9 314 aa9.5□□□□□ -0.89
NEK1-206ENST00000510533 FOXQ1Q9C009 403 aa9.5□□□□□ -0.89
NEK1-206ENST00000510533 KCNE1BA0A087WTH5 132 aa9.5□□□□□ -0.89
NEK1-206ENST00000510533 MASP2O00187 686 aa9.5□□□□□ -0.89
NEK1-206ENST00000510533 ERVFC1-1P60608 527 aa9.5□□□□□ -0.89
NEK1-206ENST00000510533 OR5I1Q13606 314 aa9.5□□□□□ -0.89
NEK1-206ENST00000510533 SP6Q3SY56 376 aa9.5□□□□□ -0.89
NEK1-206ENST00000510533 MUC20Q8N307 709 aaPredicted RBP9.5□□□□□ -0.89
NEK1-206ENST00000510533 CLDN23Q96B33 292 aa9.5□□□□□ -0.89
NEK1-206ENST00000510533 UBE2ZQ9H832 354 aaPredicted RBP9.5□□□□□ -0.89
NEK1-206ENST00000510533 TMED3Q9Y3Q3 217 aa9.5□□□□□ -0.89
NEK1-206ENST00000510533 TIMM9Q9Y5J7 89 aa9.5□□□□□ -0.89
NEK1-206ENST00000510533 ZFPL1O95159 310 aa9.5□□□□□ -0.89
NEK1-206ENST00000510533 SFT2D2O95562 160 aa9.5□□□□□ -0.89
NEK1-206ENST00000510533 HPP00738 406 aa9.5□□□□□ -0.89
NEK1-206ENST00000510533 HIST1H1DP16402 221 aaKnown RBP9.5□□□□□ -0.89
NEK1-206ENST00000510533 RFC3P40938 356 aa9.5□□□□□ -0.89
NEK1-206ENST00000510533 PJVKQ0ZLH3 352 aa9.5□□□□□ -0.89
NEK1-206ENST00000510533 DHRS2Q13268 280 aa9.5□□□□□ -0.89
NEK1-206ENST00000510533 INSL4Q14641 139 aa9.5□□□□□ -0.89
NEK1-206ENST00000510533 ZNF793Q6ZN11 406 aa9.5□□□□□ -0.89
NEK1-206ENST00000510533 SPICQ8N5J4 248 aa9.5□□□□□ -0.89
NEK1-206ENST00000510533 C4orf45Q96LM5 186 aa9.5□□□□□ -0.89
NEK1-206ENST00000510533 DOK1Q99704 481 aa9.5□□□□□ -0.89
NEK1-206ENST00000510533 TMEM30CPA0ZSE6 113 aa9.5□□□□□ -0.89
NEK1-206ENST00000510533 PIAS2O75928 621 aa9.5□□□□□ -0.89
NEK1-206ENST00000510533 ONECUT2O95948 504 aa9.5□□□□□ -0.89
NEK1-206ENST00000510533 CXCL10P02778 98 aa9.5□□□□□ -0.89
NEK1-206ENST00000510533 GP1BAP07359 652 aa9.5□□□□□ -0.89
NEK1-206ENST00000510533 CD96P40200 585 aa9.5□□□□□ -0.89
NEK1-206ENST00000510533 GSG1Q2KHT4 349 aa9.5□□□□□ -0.89
NEK1-206ENST00000510533 TMEM230Q96A57 120 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms