RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 ARR3P36575 388 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 RPS5P46782 204 aaKnown RBP3.52□□□□□ -1.85
VPS52-222ENST00000495981 EVX1P49640 407 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 DSTNP60981 165 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 ABCE1P61221 599 aaKnown RBP3.52□□□□□ -1.85
VPS52-222ENST00000495981 VSNL1P62760 191 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 UBA52P62987 128 aaKnown RBP3.52□□□□□ -1.85
VPS52-222ENST00000495981 HOXC5Q00444 222 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 TRAP1Q12931 704 aaKnown RBP3.52□□□□□ -1.85
VPS52-222ENST00000495981 KLF9Q13886 244 aaPredicted RBP3.52□□□□□ -1.85
VPS52-222ENST00000495981 GSG1Q2KHT4 349 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 ZNF260Q3ZCT1 412 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 TNFAIP8L3Q5GJ75 292 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 MTX3Q5HYI7 312 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 LCE5AQ5TCM9 118 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 USP43Q70EL4 1123 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 ZNF771Q7L3S4 317 aaPredicted RBP3.52□□□□□ -1.85
VPS52-222ENST00000495981 LRP11Q86VZ4 500 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 MSRB3Q8IXL7 192 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 C20orf196Q8IYI0 205 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 CADM2Q8N3J6 435 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 DRAXINQ8NBI3 349 aaPredicted RBP3.52□□□□□ -1.85
VPS52-222ENST00000495981 OR9I1Q8NGQ6 314 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 OR1J1Q8NGS3 322 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 OR52P1PQ8NH57 321 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 OR51F2Q8NH61 342 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 NTN5Q8WTR8 489 aaPredicted RBP3.52□□□□□ -1.85
VPS52-222ENST00000495981 PHLDA1Q8WV24 401 aaPredicted RBP3.52□□□□□ -1.85
VPS52-222ENST00000495981 SLC35B4Q969S0 331 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 LGALS12Q96DT0 336 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 RBMXL1Q96E39 390 aaKnown RBP3.52□□□□□ -1.85
VPS52-222ENST00000495981 DUX5Q96PT3 197 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 TSPAN32Q96QS1 320 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 PANX1Q96RD7 426 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 COQ7Q99807 217 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 SLC6A7Q99884 636 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 KCNS3Q9BQ31 491 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 RBM38Q9H0Z9 239 aaKnown RBP3.52□□□□□ -1.85
VPS52-222ENST00000495981 NARFLQ9H6Q4 476 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 C12orf10Q9HB07 376 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 TCF7L2Q9NQB0 619 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 CENPMQ9NSP4 180 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 HIF1ANQ9NWT6 349 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 MED29Q9NX70 200 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 SLC25A37Q9NYZ2 338 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 LAMP5Q9UJQ1 280 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 FZR1Q9UM11 496 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 CACNG2Q9Y698 323 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 TRAV36DV7A0A075B6V5 113 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 A0A087WUJ7 227 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 A0A0B4J2E0 115 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 A0A0G2JPF8 293 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 TRBV5-5A0A0J9YX44 114 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 A0A1B0GX12 115 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 A0A1W2PPI3 338 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 SH3PXD2BA1X283 911 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 DNAJC9-AS1A6NH13 148 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 HNRNPCL3B7ZW38 293 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 E5RGE8 158 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 LRRN3E7EW58 273 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 M0R3G1 203 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 RFXANKO14593 260 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 AIM2O14862 343 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 MLNRO43193 412 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 XPNPEP2O43895 674 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 TPST2O60704 377 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 SNNO75324 88 aaPredicted RBP3.51□□□□□ -1.85
VPS52-222ENST00000495981 SCGB2A1O75556 95 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 KRT33AO76009 404 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 MFN2O95140 757 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 LYPD3O95274 346 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 SNAP29O95721 258 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 NUDT3O95989 172 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 IGHV2-5P01817 119 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 BGLAPP02818 100 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 KRT8P05787 483 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 ERCC1P07992 297 aaPredicted RBP3.51□□□□□ -1.85
VPS52-222ENST00000495981 HNRNPCL4P0DMR1 293 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 RPS2P15880 293 aaKnown RBP3.51□□□□□ -1.85
VPS52-222ENST00000495981 BGNP21810 368 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 PCMT1P22061 227 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 CXCR1P25024 350 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 GRPRP30550 384 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 SOX6P35712 828 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 GLRXP35754 106 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 GPR6P46095 362 aaPredicted RBP3.51□□□□□ -1.85
VPS52-222ENST00000495981 FUT6P51993 359 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 CRISP3P54108 245 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 ERVS71-1P61550 626 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 SLC3A1Q07837 685 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 BST1Q10588 318 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 GNA13Q14344 377 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 KRTAP15-1Q3LI76 137 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 TMEM225Q6GV28 225 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 DHRS4L2Q6PKH6 230 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 UGT2A3Q6UWM9 527 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 C5orf46Q6UWT4 87 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 RFPL4BQ6ZWI9 263 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 ZNF573Q86YE8 665 aa3.51□□□□□ -1.85
VPS52-222ENST00000495981 TRIML2Q8N7C3 387 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms