RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 C20orf144Q9BQM9 153 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 HSPB9Q9BQS6 159 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 SLC46A2Q9BY10 475 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 POPDC3Q9HBV1 291 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 ZNF160Q9HCG1 818 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 MRPS18AQ9NVS2 196 aaKnown RBP3.6□□□□□ -1.83
ATG3-207ENST00000494571 SIDT1Q9NXL6 827 aaKnown RBP3.6□□□□□ -1.83
ATG3-207ENST00000494571 VPS29Q9UBQ0 182 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 ADAM29Q9UKF5 820 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 PADI3Q9ULW8 664 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 SIGLEC7Q9Y286 467 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 YBX2Q9Y2T7 364 aaKnown RBP3.6□□□□□ -1.83
ATG3-207ENST00000494571 LSM5Q9Y4Y9 91 aaKnown RBP3.6□□□□□ -1.83
ATG3-207ENST00000494571 WSB1Q9Y6I7 421 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 CKAP5Q14008 2032 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 SPAARA0A1B0GVQ0 90 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 A0A1W2PS29 197 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 C1orf226A1L170 272 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 GRIFINA4D1Z8 144 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 FITM1A5D6W6 292 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 ARRDC5A6NEK1 342 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 RBFOX3A6NFN3 312 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 TLCD2A6NGC4 264 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 ZNF736B4DX44 427 aaPredicted RBP3.6□□□□□ -1.83
ATG3-207ENST00000494571 H7BY64 318 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 ERI3O43414 337 aaKnown RBP3.6□□□□□ -1.83
ATG3-207ENST00000494571 NUDT21O43809 227 aaKnown RBP3.6□□□□□ -1.83
ATG3-207ENST00000494571 B4GALT2O60909 372 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 DDAH2O95865 285 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 SLC16A8O95907 504 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 DBHP09172 617 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 RAB40ALP0C0E4 278 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 PTGER4P35408 488 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 ID1P41134 155 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 SUMO1P63165 101 aaKnown RBP3.6□□□□□ -1.83
ATG3-207ENST00000494571 HLA-DRB3P79483 266 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 COL9A2Q14055 689 aaPredicted RBP3.6□□□□□ -1.83
ATG3-207ENST00000494571 IHHQ14623 411 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 ZXDCQ2QGD7 858 aaPredicted RBP3.6□□□□□ -1.83
ATG3-207ENST00000494571 CEACAM21Q3KPI0 293 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 ZNF385BQ569K4 471 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 CTSL3PQ5NE16 218 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 CST9Q5W186 159 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 SBSNQ6UWP8 590 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 LRRC69Q6ZNQ3 347 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 SLC16A9Q7RTY1 509 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 MRPL52Q86TS9 123 aaKnown RBP3.6□□□□□ -1.83
ATG3-207ENST00000494571 ZFP62Q8NB50 900 aaPredicted RBP3.6□□□□□ -1.83
ATG3-207ENST00000494571 ASB11Q8WXH4 323 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 RAB40AQ8WXH6 277 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 IGSF8Q969P0 613 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 ANKRD9Q96BM1 317 aaPredicted RBP3.6□□□□□ -1.83
ATG3-207ENST00000494571 OR7D2Q96RA2 312 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 GFI1Q99684 422 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 SEMA3CQ99985 751 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 NMNAT2Q9BZQ4 307 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 IGFLR1Q9H665 355 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 PLA2G3Q9NZ20 509 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 ICAM5Q9UMF0 924 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 OSGIN2Q9Y236 505 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 LRP12Q9Y561 859 aa3.6□□□□□ -1.83
ATG3-207ENST00000494571 COL11A2P13942 1736 aaPredicted RBP3.6□□□□□ -1.83
ATG3-207ENST00000494571 TRAV1-2A0A0B4J238 106 aa3.59□□□□□ -1.83
ATG3-207ENST00000494571 SMIM35A0A1B0GVV1 85 aa3.59□□□□□ -1.83
ATG3-207ENST00000494571 SMCHD1A6NHR9 2005 aa3.59□□□□□ -1.83
ATG3-207ENST00000494571 K7EQM0 130 aa3.59□□□□□ -1.83
ATG3-207ENST00000494571 MSCO60682 206 aa3.59□□□□□ -1.83
ATG3-207ENST00000494571 SEMA4FO95754 770 aa3.59□□□□□ -1.83
ATG3-207ENST00000494571 CSTBP04080 98 aaKnown RBP3.59□□□□□ -1.83
ATG3-207ENST00000494571 STAG3L2P0CL84 134 aa3.59□□□□□ -1.83
ATG3-207ENST00000494571 FAHP16930 419 aa3.59□□□□□ -1.83
ATG3-207ENST00000494571 RPL12P30050 165 aaKnown RBP3.59□□□□□ -1.83
ATG3-207ENST00000494571 MC4RP32245 332 aa3.59□□□□□ -1.83
ATG3-207ENST00000494571 PTGER1P34995 402 aa3.59□□□□□ -1.83
ATG3-207ENST00000494571 GABRA2P47869 451 aa3.59□□□□□ -1.83
ATG3-207ENST00000494571 CSNK1A1P48729 337 aa3.59□□□□□ -1.83
ATG3-207ENST00000494571 FLT3LGP49771 235 aa3.59□□□□□ -1.83
ATG3-207ENST00000494571 KHKP50053 298 aa3.59□□□□□ -1.83
ATG3-207ENST00000494571 PPOXP50336 477 aa3.59□□□□□ -1.83
ATG3-207ENST00000494571 SMIM11AP58511 58 aa3.59□□□□□ -1.83
ATG3-207ENST00000494571 RND3P61587 244 aa3.59□□□□□ -1.83
ATG3-207ENST00000494571 RPL23AP62750 156 aaKnown RBP3.59□□□□□ -1.83
ATG3-207ENST00000494571 CDC42EP1Q00587 391 aa3.59□□□□□ -1.83
ATG3-207ENST00000494571 HSPB3Q12988 150 aa3.59□□□□□ -1.83
ATG3-207ENST00000494571 IL24Q13007 206 aa3.59□□□□□ -1.83
ATG3-207ENST00000494571 ADIRFQ15847 76 aa3.59□□□□□ -1.83
ATG3-207ENST00000494571 PGGHGQ32M88 737 aa3.59□□□□□ -1.83
ATG3-207ENST00000494571 DACT2Q5SW24 774 aa3.59□□□□□ -1.83
ATG3-207ENST00000494571 RD3Q7Z3Z2 195 aa3.59□□□□□ -1.83
ATG3-207ENST00000494571 SCN4BQ8IWT1 228 aa3.59□□□□□ -1.83
ATG3-207ENST00000494571 D2HGDHQ8N465 521 aa3.59□□□□□ -1.83
ATG3-207ENST00000494571 TEX26Q8N6G2 289 aa3.59□□□□□ -1.83
ATG3-207ENST00000494571 COX18Q8N8Q8 333 aa3.59□□□□□ -1.83
ATG3-207ENST00000494571 TSEN15Q8WW01 171 aaKnown RBP3.59□□□□□ -1.83
ATG3-207ENST00000494571 EDAQ92838 391 aa3.59□□□□□ -1.83
ATG3-207ENST00000494571 MIB2Q96AX9 1013 aa3.59□□□□□ -1.83
ATG3-207ENST00000494571 GPR146Q96CH1 333 aa3.59□□□□□ -1.83
ATG3-207ENST00000494571 STARD4Q96DR4 205 aa3.59□□□□□ -1.83
ATG3-207ENST00000494571 ZMYND19Q96E35 227 aaPredicted RBP3.59□□□□□ -1.83
ATG3-207ENST00000494571 TIMP4Q99727 224 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms