RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 ANKRD61A6NGH8 418 aa12.37□□□□□ -0.43
BRCA1-223ENST00000494123 GATBO75879 557 aaKnown RBP12.37□□□□□ -0.43
BRCA1-223ENST00000494123 F12P00748 615 aaPredicted RBP12.37□□□□□ -0.43
BRCA1-223ENST00000494123 IGHV4-39P01824 125 aa12.37□□□□□ -0.43
BRCA1-223ENST00000494123 CD55P08174 381 aa12.37□□□□□ -0.43
BRCA1-223ENST00000494123 CPEP16870 476 aa12.37□□□□□ -0.43
BRCA1-223ENST00000494123 TNFRSF1AP19438 455 aa12.37□□□□□ -0.43
BRCA1-223ENST00000494123 TPBGQ13641 420 aa12.37□□□□□ -0.43
BRCA1-223ENST00000494123 TESK1Q15569 626 aa12.37□□□□□ -0.43
BRCA1-223ENST00000494123 CEP78Q5JTW2 689 aa12.37□□□□□ -0.43
BRCA1-223ENST00000494123 MOB3CQ70IA8 216 aa12.37□□□□□ -0.43
BRCA1-223ENST00000494123 LRRC75A-AS1Q8N1F1 130 aa12.37□□□□□ -0.43
BRCA1-223ENST00000494123 MS4A15Q8N5U1 240 aa12.37□□□□□ -0.43
BRCA1-223ENST00000494123 OR13C5Q8NGS8 318 aa12.37□□□□□ -0.43
BRCA1-223ENST00000494123 ITLN1Q8WWA0 313 aa12.37□□□□□ -0.43
BRCA1-223ENST00000494123 PP6455Q8WZ26 134 aa12.37□□□□□ -0.43
BRCA1-223ENST00000494123 ADAT3Q96EY9 351 aaPredicted RBP12.37□□□□□ -0.43
BRCA1-223ENST00000494123 RTL8AQ9BWD3 113 aa12.37□□□□□ -0.43
BRCA1-223ENST00000494123 CXXC4Q9H2H0 198 aa12.37□□□□□ -0.43
BRCA1-223ENST00000494123 GPR173Q9NS66 373 aa12.37□□□□□ -0.43
BRCA1-223ENST00000494123 SSX4O60224 188 aa12.36□□□□□ -0.43
BRCA1-223ENST00000494123 NCR1O76036 304 aa12.36□□□□□ -0.43
BRCA1-223ENST00000494123 LY6HO94772 140 aa12.36□□□□□ -0.43
BRCA1-223ENST00000494123 HPXP02790 462 aa12.36□□□□□ -0.43
BRCA1-223ENST00000494123 OCMP0CE72 109 aaPredicted RBP12.36□□□□□ -0.43
BRCA1-223ENST00000494123 Q499Y3 187 aa12.36□□□□□ -0.43
BRCA1-223ENST00000494123 UBASH3BQ8TF42 649 aa12.36□□□□□ -0.43
BRCA1-223ENST00000494123 OR5P3Q8WZ94 311 aa12.36□□□□□ -0.43
BRCA1-223ENST00000494123 TMEM106AQ96A25 262 aa12.36□□□□□ -0.43
BRCA1-223ENST00000494123 ITPKCQ96DU7 683 aa12.36□□□□□ -0.43
BRCA1-223ENST00000494123 MEGF10Q96KG7 1140 aa12.36□□□□□ -0.43
BRCA1-223ENST00000494123 CHST5Q9GZS9 411 aa12.36□□□□□ -0.43
BRCA1-223ENST00000494123 PPP1R3EQ9H7J1 279 aa12.36□□□□□ -0.43
BRCA1-223ENST00000494123 IGHV3-64DA0A0J9YX35 117 aa12.35□□□□□ -0.43
BRCA1-223ENST00000494123 INMTO95050 263 aa12.35□□□□□ -0.43
BRCA1-223ENST00000494123 DAOP14920 347 aa12.35□□□□□ -0.43
BRCA1-223ENST00000494123 CD200P41217 278 aa12.35□□□□□ -0.43
BRCA1-223ENST00000494123 CNN3Q15417 329 aaKnown RBP12.35□□□□□ -0.43
BRCA1-223ENST00000494123 TRAM1Q15629 374 aa12.35□□□□□ -0.43
BRCA1-223ENST00000494123 CARTPTQ16568 116 aa12.35□□□□□ -0.43
BRCA1-223ENST00000494123 TMEM42Q69YG0 159 aa12.35□□□□□ -0.43
BRCA1-223ENST00000494123 KRT74Q7RTS7 529 aa12.35□□□□□ -0.43
BRCA1-223ENST00000494123 SERPINA12Q8IW75 414 aa12.35□□□□□ -0.43
BRCA1-223ENST00000494123 PHC2Q8IXK0 858 aa12.35□□□□□ -0.43
BRCA1-223ENST00000494123 CELF2-AS1Q8N7Q2 184 aa12.35□□□□□ -0.43
BRCA1-223ENST00000494123 OR5D14Q8NGL3 314 aa12.35□□□□□ -0.43
BRCA1-223ENST00000494123 THRSPQ92748 146 aa12.35□□□□□ -0.43
BRCA1-223ENST00000494123 TMEM203Q969S6 136 aa12.35□□□□□ -0.43
BRCA1-223ENST00000494123 RNF170Q96K19 258 aa12.35□□□□□ -0.43
BRCA1-223ENST00000494123 TECTBQ96PL2 329 aa12.35□□□□□ -0.43
BRCA1-223ENST00000494123 OR14A2Q96R54 314 aa12.35□□□□□ -0.43
BRCA1-223ENST00000494123 SLC7A11Q9UPY5 501 aa12.35□□□□□ -0.43
BRCA1-223ENST00000494123 ARID1AO14497 2285 aa12.34□□□□□ -0.43
BRCA1-223ENST00000494123 IGHV1-69-2A0A0G2JMI3 117 aa12.34□□□□□ -0.43
BRCA1-223ENST00000494123 TRBV5-5A0A0J9YX44 114 aa12.34□□□□□ -0.43
BRCA1-223ENST00000494123 MAGEA13PA6NCF6 341 aa12.34□□□□□ -0.43
BRCA1-223ENST00000494123 CDC14BO60729 498 aa12.34□□□□□ -0.43
BRCA1-223ENST00000494123 GRPP07492 148 aa12.34□□□□□ -0.43
BRCA1-223ENST00000494123 PSMA1P25786 263 aaKnown RBP12.34□□□□□ -0.43
BRCA1-223ENST00000494123 MAPK3P27361 379 aaPredicted RBP12.34□□□□□ -0.43
BRCA1-223ENST00000494123 RPS11P62280 158 aaKnown RBP eCLIP12.34□□□□□ -0.43
BRCA1-223ENST00000494123 MAB21L1Q13394 359 aa12.34□□□□□ -0.43
BRCA1-223ENST00000494123 CEACAM21Q3KPI0 293 aa12.34□□□□□ -0.43
BRCA1-223ENST00000494123 DMRTC1Q5HYR2 192 aa12.34□□□□□ -0.43
BRCA1-223ENST00000494123 UTS2BQ765I0 119 aa12.34□□□□□ -0.43
BRCA1-223ENST00000494123 OR13C9Q8NGT0 318 aa12.34□□□□□ -0.43
BRCA1-223ENST00000494123 RDH5Q92781 318 aa12.34□□□□□ -0.43
BRCA1-223ENST00000494123 MYOZ1Q9NP98 299 aaPredicted RBP12.34□□□□□ -0.43
BRCA1-223ENST00000494123 NOTCH2Q04721 2471 aa12.34□□□□□ -0.43
BRCA1-223ENST00000494123 OR5B21A6NL26 309 aa12.33□□□□□ -0.43
BRCA1-223ENST00000494123 ZNF879B4DU55 563 aa12.33□□□□□ -0.43
BRCA1-223ENST00000494123 CCRL2O00421 344 aa12.33□□□□□ -0.43
BRCA1-223ENST00000494123 GABRA5P31644 462 aa12.33□□□□□ -0.43
BRCA1-223ENST00000494123 CRYBB2P43320 205 aa12.33□□□□□ -0.43
BRCA1-223ENST00000494123 GPM6AP51674 278 aa12.33□□□□□ -0.43
BRCA1-223ENST00000494123 RPS25P62851 125 aaKnown RBP12.33□□□□□ -0.43
BRCA1-223ENST00000494123 HFEQ30201 348 aa12.33□□□□□ -0.43
BRCA1-223ENST00000494123 SPRNQ5BIV9 151 aa12.33□□□□□ -0.43
BRCA1-223ENST00000494123 PRAMEF6Q5VXH4 476 aa12.33□□□□□ -0.43
BRCA1-223ENST00000494123 PARP16Q8N5Y8 322 aa12.33□□□□□ -0.43
BRCA1-223ENST00000494123 OR5A2Q8NGI9 324 aa12.33□□□□□ -0.43
BRCA1-223ENST00000494123 TRMT10AQ8TBZ6 339 aaKnown RBP12.33□□□□□ -0.43
BRCA1-223ENST00000494123 NPRL2Q8WTW4 380 aa12.33□□□□□ -0.43
BRCA1-223ENST00000494123 HPSE2Q8WWQ2 592 aa12.33□□□□□ -0.43
BRCA1-223ENST00000494123 ZCCHC4Q9H5U6 513 aa12.33□□□□□ -0.43
BRCA1-223ENST00000494123 NEK6Q9HC98 313 aa12.33□□□□□ -0.43
BRCA1-223ENST00000494123 NDUFB11Q9NX14 153 aa12.33□□□□□ -0.43
BRCA1-223ENST00000494123 CKLFQ9UBR5 152 aa12.33□□□□□ -0.43
BRCA1-223ENST00000494123 ITGB1BP2Q9UKP3 347 aa12.33□□□□□ -0.43
BRCA1-223ENST00000494123 PPP1R3CQ9UQK1 317 aa12.33□□□□□ -0.43
BRCA1-223ENST00000494123 PDZD2O15018 2839 aa12.33□□□□□ -0.43
BRCA1-223ENST00000494123 CHD3Q12873 2000 aaKnown RBP12.33□□□□□ -0.44
BRCA1-223ENST00000494123 LOC100289279A0A1B0GTE1 492 aa12.33□□□□□ -0.44
BRCA1-223ENST00000494123 FAM230AA0A1W2PPH8 454 aa12.33□□□□□ -0.44
BRCA1-223ENST00000494123 A6NLC8 198 aa12.33□□□□□ -0.44
BRCA1-223ENST00000494123 TMEM210A6NLX4 147 aa12.33□□□□□ -0.44
BRCA1-223ENST00000494123 ZNF732B4DXR9 585 aa12.33□□□□□ -0.44
BRCA1-223ENST00000494123 THBS2P35442 1172 aa12.33□□□□□ -0.44
BRCA1-223ENST00000494123 ART1P52961 327 aa12.33□□□□□ -0.44
BRCA1-223ENST00000494123 PPP3R1P63098 170 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms