RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 ZNF19P17023 458 aa8.74□□□□□ -1.01
TRAPPC12-222ENST00000493792 GATA4P43694 442 aa8.74□□□□□ -1.01
TRAPPC12-222ENST00000493792 GMFBP60983 142 aa8.74□□□□□ -1.01
TRAPPC12-222ENST00000493792 LCN2P80188 198 aa8.74□□□□□ -1.01
TRAPPC12-222ENST00000493792 RIPPLY1Q0D2K3 151 aa8.74□□□□□ -1.01
TRAPPC12-222ENST00000493792 SMN1Q16637 294 aaKnown RBP8.74□□□□□ -1.01
TRAPPC12-222ENST00000493792 TMEM155Q4W5P6 130 aa8.74□□□□□ -1.01
TRAPPC12-222ENST00000493792 DMRTC1Q5HYR2 192 aa8.74□□□□□ -1.01
TRAPPC12-222ENST00000493792 CEP78Q5JTW2 689 aa8.74□□□□□ -1.01
TRAPPC12-222ENST00000493792 OGFRL1Q5TC84 451 aaPredicted RBP8.74□□□□□ -1.01
TRAPPC12-222ENST00000493792 PLCXD3Q63HM9 321 aa8.74□□□□□ -1.01
TRAPPC12-222ENST00000493792 SFRP4Q6FHJ7 346 aaPredicted RBP8.74□□□□□ -1.01
TRAPPC12-222ENST00000493792 FAHD2BQ6P2I3 314 aaPredicted RBP8.74□□□□□ -1.01
TRAPPC12-222ENST00000493792 MOB3CQ70IA8 216 aa8.74□□□□□ -1.01
TRAPPC12-222ENST00000493792 LHFPL3Q86UP9 236 aa8.74□□□□□ -1.01
TRAPPC12-222ENST00000493792 LRRC28Q86X40 367 aaPredicted RBP8.74□□□□□ -1.01
TRAPPC12-222ENST00000493792 ZDHHC23Q8IYP9 409 aa8.74□□□□□ -1.01
TRAPPC12-222ENST00000493792 ELMOD2Q8IZ81 293 aa8.74□□□□□ -1.01
TRAPPC12-222ENST00000493792 SETD9Q8NE22 299 aa8.74□□□□□ -1.01
TRAPPC12-222ENST00000493792 CNIH3Q8TBE1 160 aa8.74□□□□□ -1.01
TRAPPC12-222ENST00000493792 TMEM186Q96B77 213 aa8.74□□□□□ -1.01
TRAPPC12-222ENST00000493792 FAHD2AQ96GK7 314 aa8.74□□□□□ -1.01
TRAPPC12-222ENST00000493792 RNF170Q96K19 258 aa8.74□□□□□ -1.01
TRAPPC12-222ENST00000493792 METTL17Q9H7H0 456 aaPredicted RBP8.74□□□□□ -1.01
TRAPPC12-222ENST00000493792 PLEKHA1Q9HB21 404 aa8.74□□□□□ -1.01
TRAPPC12-222ENST00000493792 ABCB9Q9NP78 766 aa8.74□□□□□ -1.01
TRAPPC12-222ENST00000493792 G6PC2Q9NQR9 355 aa8.74□□□□□ -1.01
TRAPPC12-222ENST00000493792 ACOXLQ9NUZ1 547 aa8.74□□□□□ -1.01
TRAPPC12-222ENST00000493792 HIF1ANQ9NWT6 349 aa8.74□□□□□ -1.01
TRAPPC12-222ENST00000493792 NKX1-2Q9UD57 310 aaPredicted RBP8.74□□□□□ -1.01
TRAPPC12-222ENST00000493792 A6NIN4 97 aa8.73□□□□□ -1.01
TRAPPC12-222ENST00000493792 CEACAM18A8MTB9 384 aa8.73□□□□□ -1.01
TRAPPC12-222ENST00000493792 C3orf80F5H4A9 247 aa8.73□□□□□ -1.01
TRAPPC12-222ENST00000493792 CASQ2O14958 399 aaPredicted RBP8.73□□□□□ -1.01
TRAPPC12-222ENST00000493792 SPRY1O43609 319 aaPredicted RBP8.73□□□□□ -1.01
TRAPPC12-222ENST00000493792 PLPP2O43688 288 aa8.73□□□□□ -1.01
TRAPPC12-222ENST00000493792 DHRS3O75911 302 aa8.73□□□□□ -1.01
TRAPPC12-222ENST00000493792 CST4P01036 141 aa8.73□□□□□ -1.01
TRAPPC12-222ENST00000493792 HTR1AP08908 422 aa8.73□□□□□ -1.01
TRAPPC12-222ENST00000493792 ATP6V1B1P15313 513 aa8.73□□□□□ -1.01
TRAPPC12-222ENST00000493792 RPS2P15880 293 aaKnown RBP8.73□□□□□ -1.01
TRAPPC12-222ENST00000493792 GABRB1P18505 474 aa8.73□□□□□ -1.01
TRAPPC12-222ENST00000493792 PCMT1P22061 227 aa8.73□□□□□ -1.01
TRAPPC12-222ENST00000493792 SRP14P37108 136 aaKnown RBP8.73□□□□□ -1.01
TRAPPC12-222ENST00000493792 CAPGP40121 348 aa8.73□□□□□ -1.01
TRAPPC12-222ENST00000493792 GPM6AP51674 278 aa8.73□□□□□ -1.01
TRAPPC12-222ENST00000493792 DVL1P1P54792 670 aaPredicted RBP8.73□□□□□ -1.01
TRAPPC12-222ENST00000493792 OR12D2P58182 307 aa8.73□□□□□ -1.01
TRAPPC12-222ENST00000493792 ACTA2P62736 377 aa8.73□□□□□ -1.01
TRAPPC12-222ENST00000493792 ACTG2P63267 376 aa8.73□□□□□ -1.01
TRAPPC12-222ENST00000493792 CSNK2BP67870 215 aa8.73□□□□□ -1.01
TRAPPC12-222ENST00000493792 HOXA4Q00056 320 aaPredicted RBP8.73□□□□□ -1.01
TRAPPC12-222ENST00000493792 SLC34A1Q06495 639 aa8.73□□□□□ -1.01
TRAPPC12-222ENST00000493792 ZNF181Q2M3W8 571 aa8.73□□□□□ -1.01
TRAPPC12-222ENST00000493792 KLHL22Q53GT1 634 aa8.73□□□□□ -1.01
TRAPPC12-222ENST00000493792 ESCO2Q56NI9 601 aa8.73□□□□□ -1.01
TRAPPC12-222ENST00000493792 FAM120AOSQ5T036 256 aa8.73□□□□□ -1.01
TRAPPC12-222ENST00000493792 ZNF691Q5VV52 312 aa8.73□□□□□ -1.01
TRAPPC12-222ENST00000493792 DOK3Q7L591 496 aa8.73□□□□□ -1.01
TRAPPC12-222ENST00000493792 PLPP7Q8NBV4 271 aa8.73□□□□□ -1.01
TRAPPC12-222ENST00000493792 OR1M1Q8NGA1 313 aa8.73□□□□□ -1.01
TRAPPC12-222ENST00000493792 Q8TCH9 128 aa8.73□□□□□ -1.01
TRAPPC12-222ENST00000493792 LRRC29Q8WV35 223 aa8.73□□□□□ -1.01
TRAPPC12-222ENST00000493792 OR5P3Q8WZ94 311 aa8.73□□□□□ -1.01
TRAPPC12-222ENST00000493792 RORBQ92753 470 aa8.73□□□□□ -1.01
TRAPPC12-222ENST00000493792 C4orf36Q96KX1 117 aa8.73□□□□□ -1.01
TRAPPC12-222ENST00000493792 MYCBPQ99417 103 aaPredicted RBP8.73□□□□□ -1.01
TRAPPC12-222ENST00000493792 ALG8Q9BVK2 526 aa8.73□□□□□ -1.01
TRAPPC12-222ENST00000493792 PATZ1Q9HBE1 687 aaKnown RBP8.73□□□□□ -1.01
TRAPPC12-222ENST00000493792 TMEM165Q9HC07 324 aa8.73□□□□□ -1.01
TRAPPC12-222ENST00000493792 ENPP5Q9UJA9 477 aa8.73□□□□□ -1.01
TRAPPC12-222ENST00000493792 EXOGQ9Y2C4 368 aaKnown RBP8.73□□□□□ -1.01
TRAPPC12-222ENST00000493792 MYRFQ9Y2G1 1151 aa8.73□□□□□ -1.01
TRAPPC12-222ENST00000493792 MEGF8Q7Z7M0 2845 aa8.72□□□□□ -1.01
TRAPPC12-222ENST00000493792 TRAV20A0A0B4J274 112 aa8.72□□□□□ -1.01
TRAPPC12-222ENST00000493792 ZNF732B4DXR9 585 aa8.72□□□□□ -1.01
TRAPPC12-222ENST00000493792 LGALS8O00214 317 aa8.72□□□□□ -1.01
TRAPPC12-222ENST00000493792 SYT7O43581 403 aa8.72□□□□□ -1.01
TRAPPC12-222ENST00000493792 FOXH1O75593 365 aa8.72□□□□□ -1.01
TRAPPC12-222ENST00000493792 NRASP01111 189 aa8.72□□□□□ -1.01
TRAPPC12-222ENST00000493792 SRD5A1P18405 259 aa8.72□□□□□ -1.01
TRAPPC12-222ENST00000493792 ADARB1P78563 741 aaKnown RBP8.72□□□□□ -1.01
TRAPPC12-222ENST00000493792 RAB40BQ12829 278 aa8.72□□□□□ -1.01
TRAPPC12-222ENST00000493792 ZNF154Q13106 437 aa8.72□□□□□ -1.01
TRAPPC12-222ENST00000493792 KCNJ8Q15842 424 aa8.72□□□□□ -1.01
TRAPPC12-222ENST00000493792 WDR38Q5JTN6 314 aa8.72□□□□□ -1.01
TRAPPC12-222ENST00000493792 CLVS2Q5SYC1 327 aa8.72□□□□□ -1.01
TRAPPC12-222ENST00000493792 ZNF684Q5T5D7 378 aa8.72□□□□□ -1.01
TRAPPC12-222ENST00000493792 DCAF12L2Q5VW00 463 aa8.72□□□□□ -1.01
TRAPPC12-222ENST00000493792 NLRC3Q7RTR2 1065 aa8.72□□□□□ -1.01
TRAPPC12-222ENST00000493792 KCTD20Q7Z5Y7 419 aa8.72□□□□□ -1.01
TRAPPC12-222ENST00000493792 WDR86Q86TI4 376 aa8.72□□□□□ -1.01
TRAPPC12-222ENST00000493792 CATSPERDQ86XM0 798 aa8.72□□□□□ -1.01
TRAPPC12-222ENST00000493792 C8orf59Q8N0T1 100 aaPredicted RBP8.72□□□□□ -1.01
TRAPPC12-222ENST00000493792 OR8B3Q8NGG8 313 aa8.72□□□□□ -1.01
TRAPPC12-222ENST00000493792 OR52I1Q8NGK6 324 aa8.72□□□□□ -1.01
TRAPPC12-222ENST00000493792 APH1BQ8WW43 257 aa8.72□□□□□ -1.01
TRAPPC12-222ENST00000493792 RPL3LQ92901 407 aaKnown RBP8.72□□□□□ -1.01
TRAPPC12-222ENST00000493792 ITPKCQ96DU7 683 aa8.72□□□□□ -1.01
TRAPPC12-222ENST00000493792 NEIL1Q96FI4 390 aaPredicted RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms