RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 IFT27Q9BW83 186 aa10.71□□□□□ -0.69
USF1-206ENST00000491629 SLC25A10Q9UBX3 287 aaPredicted RBP10.71□□□□□ -0.69
USF1-206ENST00000491629 KCNG2Q9UJ96 466 aa10.71□□□□□ -0.69
USF1-206ENST00000491629 hCG_38984A0A1B0GV85 526 aa10.7□□□□□ -0.7
USF1-206ENST00000491629 RHCEP18577 417 aa10.7□□□□□ -0.7
USF1-206ENST00000491629 SLC6A6P31641 620 aa10.7□□□□□ -0.7
USF1-206ENST00000491629 GSK3BP49841 420 aa10.7□□□□□ -0.7
USF1-206ENST00000491629 KRTAP10-11P60412 298 aa10.7□□□□□ -0.7
USF1-206ENST00000491629 ERVFRD-1P60508 538 aa10.7□□□□□ -0.7
USF1-206ENST00000491629 EMX1Q04741 257 aaPredicted RBP10.7□□□□□ -0.7
USF1-206ENST00000491629 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.7□□□□□ -0.7
USF1-206ENST00000491629 MZT1Q08AG7 82 aa10.7□□□□□ -0.7
USF1-206ENST00000491629 AANATQ16613 207 aa10.7□□□□□ -0.7
USF1-206ENST00000491629 NCR3LG1Q68D85 454 aa10.7□□□□□ -0.7
USF1-206ENST00000491629 C8orf82Q6P1X6 216 aaPredicted RBP10.7□□□□□ -0.7
USF1-206ENST00000491629 NDUFA11Q86Y39 141 aa10.7□□□□□ -0.7
USF1-206ENST00000491629 OR4S1Q8NGB4 309 aa10.7□□□□□ -0.7
USF1-206ENST00000491629 RPL3LQ92901 407 aaKnown RBP10.7□□□□□ -0.7
USF1-206ENST00000491629 SLAMF6Q96DU3 332 aa10.7□□□□□ -0.7
USF1-206ENST00000491629 KCNJ15Q99712 375 aa10.7□□□□□ -0.7
USF1-206ENST00000491629 SIKE1Q9BRV8 207 aa10.7□□□□□ -0.7
USF1-206ENST00000491629 COPS4Q9BT78 406 aa10.7□□□□□ -0.7
USF1-206ENST00000491629 DNTTIP1Q9H147 329 aa10.7□□□□□ -0.7
USF1-206ENST00000491629 CHCHD3Q9NX63 227 aaKnown RBP10.7□□□□□ -0.7
USF1-206ENST00000491629 RHBDD3Q9Y3P4 386 aa10.7□□□□□ -0.7
USF1-206ENST00000491629 COMMD3-BMI1R4GMX3 469 aa10.7□□□□□ -0.7
USF1-206ENST00000491629 DYNC2H1Q8NCM8 4307 aaKnown RBP10.7□□□□□ -0.7
USF1-206ENST00000491629 IGKV1D-17A0A075B6S4 117 aa10.69□□□□□ -0.7
USF1-206ENST00000491629 WI2-2373I1.2A0A1W2PRP0 233 aa10.69□□□□□ -0.7
USF1-206ENST00000491629 ANKRD30BLA7E2S9 258 aa10.69□□□□□ -0.7
USF1-206ENST00000491629 SIGLEC5O15389 551 aa10.69□□□□□ -0.7
USF1-206ENST00000491629 AKR7A2O43488 359 aa10.69□□□□□ -0.7
USF1-206ENST00000491629 XRCC2O43543 280 aa10.69□□□□□ -0.7
USF1-206ENST00000491629 ANGPTL7O43827 346 aa10.69□□□□□ -0.7
USF1-206ENST00000491629 ACAA1P09110 424 aaPredicted RBP10.69□□□□□ -0.7
USF1-206ENST00000491629 ZNF823P16415 610 aa10.69□□□□□ -0.7
USF1-206ENST00000491629 GRK5P34947 590 aa10.69□□□□□ -0.7
USF1-206ENST00000491629 DDOSTP39656 456 aa10.69□□□□□ -0.7
USF1-206ENST00000491629 NAA10P41227 235 aaPredicted RBP10.69□□□□□ -0.7
USF1-206ENST00000491629 RAB13P51153 203 aa10.69□□□□□ -0.7
USF1-206ENST00000491629 SLC7A2P52569 658 aa10.69□□□□□ -0.7
USF1-206ENST00000491629 CAV3P56539 151 aa10.69□□□□□ -0.7
USF1-206ENST00000491629 LDLRAD2Q5SZI1 272 aa10.69□□□□□ -0.7
USF1-206ENST00000491629 MKXQ8IYA7 352 aa10.69□□□□□ -0.7
USF1-206ENST00000491629 REEP6Q96HR9 211 aa10.69□□□□□ -0.7
USF1-206ENST00000491629 NKX3-1Q99801 234 aaPredicted RBP10.69□□□□□ -0.7
USF1-206ENST00000491629 NPFFR1Q9GZQ6 430 aa10.69□□□□□ -0.7
USF1-206ENST00000491629 WNT10AQ9GZT5 417 aa10.69□□□□□ -0.7
USF1-206ENST00000491629 NSRP1Q9H0G5 558 aaKnown RBP10.69□□□□□ -0.7
USF1-206ENST00000491629 FAM234AQ9H0X4 552 aa10.69□□□□□ -0.7
USF1-206ENST00000491629 OPA3Q9H6K4 179 aa10.69□□□□□ -0.7
USF1-206ENST00000491629 ZNF222Q9UK12 451 aa10.69□□□□□ -0.7
USF1-206ENST00000491629 SF3B6Q9Y3B4 125 aaKnown RBP10.69□□□□□ -0.7
USF1-206ENST00000491629 A0A1W2PQ09 198 aa10.68□□□□□ -0.7
USF1-206ENST00000491629 GSTA4O15217 222 aa10.68□□□□□ -0.7
USF1-206ENST00000491629 TBX1O43435 398 aa10.68□□□□□ -0.7
USF1-206ENST00000491629 FAM107AO95990 144 aa10.68□□□□□ -0.7
USF1-206ENST00000491629 NDUFB7P17568 137 aa10.68□□□□□ -0.7
USF1-206ENST00000491629 ACKR3P25106 362 aa10.68□□□□□ -0.7
USF1-206ENST00000491629 DCTDP32321 178 aa10.68□□□□□ -0.7
USF1-206ENST00000491629 GSSP48637 474 aa10.68□□□□□ -0.7
USF1-206ENST00000491629 GSK3AP49840 483 aa10.68□□□□□ -0.7
USF1-206ENST00000491629 MAPRE2Q15555 327 aa10.68□□□□□ -0.7
USF1-206ENST00000491629 FAM76BQ5HYJ3 339 aa10.68□□□□□ -0.7
USF1-206ENST00000491629 PGBD2Q6P3X8 592 aa10.68□□□□□ -0.7
USF1-206ENST00000491629 CCDC121Q6ZUS5 278 aa10.68□□□□□ -0.7
USF1-206ENST00000491629 LHFPL4Q7Z7J7 247 aa10.68□□□□□ -0.7
USF1-206ENST00000491629 ZNF511Q8NB15 262 aa10.68□□□□□ -0.7
USF1-206ENST00000491629 ZNRF1Q8ND25 227 aa10.68□□□□□ -0.7
USF1-206ENST00000491629 OR4F17Q8NGA8 305 aa10.68□□□□□ -0.7
USF1-206ENST00000491629 OR10Z1Q8NGY1 313 aa10.68□□□□□ -0.7
USF1-206ENST00000491629 OR4F4Q96R69 305 aa10.68□□□□□ -0.7
USF1-206ENST00000491629 CDCA4Q9BXL8 241 aa10.68□□□□□ -0.7
USF1-206ENST00000491629 C19orf12Q9NSK7 152 aa10.68□□□□□ -0.7
USF1-206ENST00000491629 CENPMQ9NSP4 180 aa10.68□□□□□ -0.7
USF1-206ENST00000491629 IDH3BO43837 385 aa10.67□□□□□ -0.7
USF1-206ENST00000491629 TIPRLO75663 272 aa10.67□□□□□ -0.7
USF1-206ENST00000491629 RHBDL1O75783 438 aa10.67□□□□□ -0.7
USF1-206ENST00000491629 SEMG1P04279 462 aa10.67□□□□□ -0.7
USF1-206ENST00000491629 GYPBP06028 91 aa10.67□□□□□ -0.7
USF1-206ENST00000491629 MSX2P35548 267 aaPredicted RBP10.67□□□□□ -0.7
USF1-206ENST00000491629 CX3CR1P49238 355 aa10.67□□□□□ -0.7
USF1-206ENST00000491629 TMEM95Q3KNT9 176 aa10.67□□□□□ -0.7
USF1-206ENST00000491629 PAPD5Q8NDF8 572 aaKnown RBP10.67□□□□□ -0.7
USF1-206ENST00000491629 PROKR2Q8NFJ6 384 aa10.67□□□□□ -0.7
USF1-206ENST00000491629 OR5D13Q8NGL4 314 aa10.67□□□□□ -0.7
USF1-206ENST00000491629 HPSE2Q8WWQ2 592 aa10.67□□□□□ -0.7
USF1-206ENST00000491629 FAM162AQ96A26 154 aa10.67□□□□□ -0.7
USF1-206ENST00000491629 MED30Q96HR3 178 aa10.67□□□□□ -0.7
USF1-206ENST00000491629 AMELYQ99218 206 aa10.67□□□□□ -0.7
USF1-206ENST00000491629 EGLN3Q9H6Z9 239 aa10.67□□□□□ -0.7
USF1-206ENST00000491629 SP140LQ9H930 580 aa10.67□□□□□ -0.7
USF1-206ENST00000491629 RAB18Q9NP72 206 aa10.67□□□□□ -0.7
USF1-206ENST00000491629 DNAH7Q8WXX0 4024 aa10.66□□□□□ -0.7
USF1-206ENST00000491629 DHRS12A0PJE2 317 aa10.66□□□□□ -0.7
USF1-206ENST00000491629 A6NDX4 124 aa10.66□□□□□ -0.7
USF1-206ENST00000491629 A6NHS1 94 aa10.66□□□□□ -0.7
USF1-206ENST00000491629 NKX6-3A6NJ46 265 aa10.66□□□□□ -0.7
USF1-206ENST00000491629 FAM90A8PA6NJQ4 464 aa10.66□□□□□ -0.7
USF1-206ENST00000491629 OR2AT4A6NND4 320 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms