RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 SERTAD4Q9NUC0 356 aa11.33□□□□□ -0.6
VARS-227ENST00000489979 TENM3Q9P273 2699 aa11.33□□□□□ -0.6
VARS-227ENST00000489979 K7EIL1 84 aa11.32□□□□□ -0.6
VARS-227ENST00000489979 SIGLEC5O15389 551 aa11.32□□□□□ -0.6
VARS-227ENST00000489979 AKR7A2O43488 359 aa11.32□□□□□ -0.6
VARS-227ENST00000489979 ANXA2P07355 339 aaKnown RBP11.32□□□□□ -0.6
VARS-227ENST00000489979 SPARCP09486 303 aa11.32□□□□□ -0.6
VARS-227ENST00000489979 IGLL1P15814 213 aa11.32□□□□□ -0.6
VARS-227ENST00000489979 CAV3P56539 151 aa11.32□□□□□ -0.6
VARS-227ENST00000489979 MXRA7P84157 204 aa11.32□□□□□ -0.6
VARS-227ENST00000489979 KRT72Q14CN4 511 aa11.32□□□□□ -0.6
VARS-227ENST00000489979 LIAT1Q6ZQX7 453 aa11.32□□□□□ -0.6
VARS-227ENST00000489979 OR10Z1Q8NGY1 313 aa11.32□□□□□ -0.6
VARS-227ENST00000489979 DDOQ99489 341 aa11.32□□□□□ -0.6
VARS-227ENST00000489979 MICU1Q9BPX6 476 aa11.32□□□□□ -0.6
VARS-227ENST00000489979 PAPOLGQ9BWT3 736 aaKnown RBP11.32□□□□□ -0.6
VARS-227ENST00000489979 RHBDD3Q9Y3P4 386 aa11.32□□□□□ -0.6
VARS-227ENST00000489979 COMMD3-BMI1R4GMX3 469 aa11.32□□□□□ -0.6
VARS-227ENST00000489979 hCG_38984A0A1B0GV85 526 aa11.31□□□□□ -0.6
VARS-227ENST00000489979 ZNF878C9JN71 531 aa11.31□□□□□ -0.6
VARS-227ENST00000489979 ZNF593O00488 134 aaPredicted RBP11.31□□□□□ -0.6
VARS-227ENST00000489979 ACAA1P09110 424 aaPredicted RBP11.31□□□□□ -0.6
VARS-227ENST00000489979 CD33P20138 364 aa11.31□□□□□ -0.6
VARS-227ENST00000489979 GNALP38405 381 aa11.31□□□□□ -0.6
VARS-227ENST00000489979 GABRA2P47869 451 aa11.31□□□□□ -0.6
VARS-227ENST00000489979 CX3CR1P49238 355 aa11.31□□□□□ -0.6
VARS-227ENST00000489979 GSK3AP49840 483 aa11.31□□□□□ -0.6
VARS-227ENST00000489979 KLHL12Q53G59 568 aa11.31□□□□□ -0.6
VARS-227ENST00000489979 MKXQ8IYA7 352 aa11.31□□□□□ -0.6
VARS-227ENST00000489979 FAM185AQ8N0U4 392 aa11.31□□□□□ -0.6
VARS-227ENST00000489979 OR2T4Q8NH00 348 aa11.31□□□□□ -0.6
VARS-227ENST00000489979 WIPF2Q8TF74 440 aaPredicted RBP11.31□□□□□ -0.6
VARS-227ENST00000489979 ANXA2P2A6NMY6 339 aa11.3□□□□□ -0.6
VARS-227ENST00000489979 ENTPD1P49961 510 aa11.3□□□□□ -0.6
VARS-227ENST00000489979 IL5RAQ01344 420 aa11.3□□□□□ -0.6
VARS-227ENST00000489979 SPIBQ01892 262 aa11.3□□□□□ -0.6
VARS-227ENST00000489979 GFOD2Q3B7J2 385 aa11.3□□□□□ -0.6
VARS-227ENST00000489979 Q8N2B8 174 aa11.3□□□□□ -0.6
VARS-227ENST00000489979 FAM86B1Q8N7N1 296 aa11.3□□□□□ -0.6
VARS-227ENST00000489979 ZNF511Q8NB15 262 aa11.3□□□□□ -0.6
VARS-227ENST00000489979 ZNRF1Q8ND25 227 aa11.3□□□□□ -0.6
VARS-227ENST00000489979 CSNK2A3Q8NEV1 391 aa11.3□□□□□ -0.6
VARS-227ENST00000489979 WFDC9Q8NEX5 89 aa11.3□□□□□ -0.6
VARS-227ENST00000489979 HOPXQ9BPY8 73 aaPredicted RBP11.3□□□□□ -0.6
VARS-227ENST00000489979 KCTD14Q9BQ13 255 aaPredicted RBP11.3□□□□□ -0.6
VARS-227ENST00000489979 RTL8AQ9BWD3 113 aa11.3□□□□□ -0.6
VARS-227ENST00000489979 NLKQ9UBE8 527 aa11.3□□□□□ -0.6
VARS-227ENST00000489979 TRBV23-1A0A0A0MS06 115 aa11.29□□□□□ -0.6
VARS-227ENST00000489979 TMEM210A6NLX4 147 aa11.29□□□□□ -0.6
VARS-227ENST00000489979 OR2AT4A6NND4 320 aa11.29□□□□□ -0.6
VARS-227ENST00000489979 HMGB1P1B2RPK0 211 aaPredicted RBP11.29□□□□□ -0.6
VARS-227ENST00000489979 GADD45GO95257 159 aa11.29□□□□□ -0.6
VARS-227ENST00000489979 HSD11B1P28845 292 aa11.29□□□□□ -0.6
VARS-227ENST00000489979 FMO3P31513 532 aa11.29□□□□□ -0.6
VARS-227ENST00000489979 SLC15A1P46059 708 aa11.29□□□□□ -0.6
VARS-227ENST00000489979 GSSP48637 474 aa11.29□□□□□ -0.6
VARS-227ENST00000489979 SMIM11AP58511 58 aa11.29□□□□□ -0.6
VARS-227ENST00000489979 GRB2P62993 217 aaKnown RBP11.29□□□□□ -0.6
VARS-227ENST00000489979 PLA1AQ53H76 456 aa11.29□□□□□ -0.6
VARS-227ENST00000489979 DEFB121Q5J5C9 76 aa11.29□□□□□ -0.6
VARS-227ENST00000489979 C8orf82Q6P1X6 216 aaPredicted RBP11.29□□□□□ -0.6
VARS-227ENST00000489979 CCBE1Q6UXH8 406 aaPredicted RBP11.29□□□□□ -0.6
VARS-227ENST00000489979 KCTD8Q6ZWB6 473 aa11.29□□□□□ -0.6
VARS-227ENST00000489979 FAM57BQ71RH2 274 aa11.29□□□□□ -0.6
VARS-227ENST00000489979 PRSS45Q7RTY3 260 aa11.29□□□□□ -0.6
VARS-227ENST00000489979 CPLX4Q7Z7G2 160 aa11.29□□□□□ -0.6
VARS-227ENST00000489979 TMEM185AQ8NFB2 350 aa11.29□□□□□ -0.6
VARS-227ENST00000489979 OR5M11Q96RB7 305 aa11.29□□□□□ -0.6
VARS-227ENST00000489979 FGF23Q9GZV9 251 aaPredicted RBP11.29□□□□□ -0.6
VARS-227ENST00000489979 EGLN3Q9H6Z9 239 aa11.29□□□□□ -0.6
VARS-227ENST00000489979 C19orf12Q9NSK7 152 aa11.29□□□□□ -0.6
VARS-227ENST00000489979 DNAJC27Q9NZQ0 273 aa11.29□□□□□ -0.6
VARS-227ENST00000489979 ZNF319Q9P2F9 582 aa11.29□□□□□ -0.6
VARS-227ENST00000489979 CD300AQ9UGN4 299 aa11.29□□□□□ -0.6
VARS-227ENST00000489979 IGKV1D-17A0A075B6S4 117 aa11.28□□□□□ -0.6
VARS-227ENST00000489979 A0A1W2PRX2 142 aa11.28□□□□□ -0.6
VARS-227ENST00000489979 DHRS12A0PJE2 317 aa11.28□□□□□ -0.6
VARS-227ENST00000489979 ZNF850A8MQ14 1090 aa11.28□□□□□ -0.6
VARS-227ENST00000489979 PEX14O75381 377 aa11.28□□□□□ -0.6
VARS-227ENST00000489979 GYPBP06028 91 aa11.28□□□□□ -0.6
VARS-227ENST00000489979 PSG2P11465 335 aa11.28□□□□□ -0.6
VARS-227ENST00000489979 FAHP16930 419 aa11.28□□□□□ -0.6
VARS-227ENST00000489979 GLRA1P23415 457 aa11.28□□□□□ -0.6
VARS-227ENST00000489979 CFL1P23528 166 aaKnown RBP11.28□□□□□ -0.6
VARS-227ENST00000489979 COX7A1P24310 79 aa11.28□□□□□ -0.6
VARS-227ENST00000489979 IFNGR2P38484 337 aa11.28□□□□□ -0.6
VARS-227ENST00000489979 RAB13P51153 203 aa11.28□□□□□ -0.6
VARS-227ENST00000489979 LGALS4P56470 323 aa11.28□□□□□ -0.6
VARS-227ENST00000489979 ZNF121P58317 390 aaPredicted RBP11.28□□□□□ -0.6
VARS-227ENST00000489979 PRDX4Q13162 271 aa11.28□□□□□ -0.6
VARS-227ENST00000489979 CNN3Q15417 329 aaKnown RBP11.28□□□□□ -0.6
VARS-227ENST00000489979 SNCBQ16143 134 aa11.28□□□□□ -0.6
VARS-227ENST00000489979 FAM76BQ5HYJ3 339 aa11.28□□□□□ -0.6
VARS-227ENST00000489979 TEX30Q5JUR7 227 aa11.28□□□□□ -0.6
VARS-227ENST00000489979 GLYATQ6IB77 296 aa11.28□□□□□ -0.6
VARS-227ENST00000489979 CGB2Q6NT52 195 aa11.28□□□□□ -0.6
VARS-227ENST00000489979 LHFPL4Q7Z7J7 247 aa11.28□□□□□ -0.6
VARS-227ENST00000489979 TMEM219Q86XT9 240 aa11.28□□□□□ -0.6
VARS-227ENST00000489979 SLC37A3Q8NCC5 494 aa11.28□□□□□ -0.6
VARS-227ENST00000489979 PAPD5Q8NDF8 572 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms