RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 PRB3Q04118 309 aaPredicted RBP15.12■□□□□ 0.01
HDAC6-231ENST00000488905 KLRD1Q13241 179 aa15.12■□□□□ 0.01
HDAC6-231ENST00000488905 SNCBQ16143 134 aa15.12■□□□□ 0.01
HDAC6-231ENST00000488905 MICAQ29983 383 aa15.12■□□□□ 0.01
HDAC6-231ENST00000488905 CPLX4Q7Z7G2 160 aa15.12■□□□□ 0.01
HDAC6-231ENST00000488905 GALNT4Q8N4A0 578 aa15.12■□□□□ 0.01
HDAC6-231ENST00000488905 PGAM5Q96HS1 289 aa15.12■□□□□ 0.01
HDAC6-231ENST00000488905 RTL8AQ9BWD3 113 aa15.12■□□□□ 0.01
HDAC6-231ENST00000488905 DNTTIP1Q9H147 329 aa15.12■□□□□ 0.01
HDAC6-231ENST00000488905 RGCCQ9H4X1 137 aa15.12■□□□□ 0.01
HDAC6-231ENST00000488905 C16orf95Q9H693 158 aa15.12■□□□□ 0.01
HDAC6-231ENST00000488905 MAGIXQ9H6Y5 334 aa15.12■□□□□ 0.01
HDAC6-231ENST00000488905 REEP1Q9H902 201 aa15.12■□□□□ 0.01
HDAC6-231ENST00000488905 MED20Q9H944 212 aa15.12■□□□□ 0.01
HDAC6-231ENST00000488905 BRD7Q9NPI1 651 aa15.12■□□□□ 0.01
HDAC6-231ENST00000488905 DNAJB11Q9UBS4 358 aa15.12■□□□□ 0.01
HDAC6-231ENST00000488905 SAMHD1Q9Y3Z3 626 aaKnown RBP15.12■□□□□ 0.01
HDAC6-231ENST00000488905 TCRBV5S2A0A599 114 aa15.11■□□□□ 0.01
HDAC6-231ENST00000488905 FAM183AA6NL82 134 aa15.11■□□□□ 0.01
HDAC6-231ENST00000488905 NPFFO15130 113 aa15.11■□□□□ 0.01
HDAC6-231ENST00000488905 TSPAN15O95858 294 aa15.11■□□□□ 0.01
HDAC6-231ENST00000488905 EEF1B2P24534 225 aaKnown RBP15.11■□□□□ 0.01
HDAC6-231ENST00000488905 GSTT1P30711 240 aa15.11■□□□□ 0.01
HDAC6-231ENST00000488905 TGM4P49221 684 aa15.11■□□□□ 0.01
HDAC6-231ENST00000488905 DLX1P56177 255 aa15.11■□□□□ 0.01
HDAC6-231ENST00000488905 GMFBP60983 142 aa15.11■□□□□ 0.01
HDAC6-231ENST00000488905 ATPAF1Q5TC12 328 aaPredicted RBP15.11■□□□□ 0.01
HDAC6-231ENST00000488905 SHFQ7M4L6 423 aa15.11■□□□□ 0.01
HDAC6-231ENST00000488905 Q8N7P7 452 aa15.11■□□□□ 0.01
HDAC6-231ENST00000488905 OR5T2Q8NGG2 359 aa15.11■□□□□ 0.01
HDAC6-231ENST00000488905 OR10Z1Q8NGY1 313 aa15.11■□□□□ 0.01
HDAC6-231ENST00000488905 TEX47Q8TBZ9 253 aa15.11■□□□□ 0.01
HDAC6-231ENST00000488905 H1FXQ92522 213 aaKnown RBP15.11■□□□□ 0.01
HDAC6-231ENST00000488905 RAB3IPQ96QF0 476 aaPredicted RBP15.11■□□□□ 0.01
HDAC6-231ENST00000488905 PKP2Q99959 881 aa15.11■□□□□ 0.01
HDAC6-231ENST00000488905 WDR13Q9H1Z4 485 aa15.11■□□□□ 0.01
HDAC6-231ENST00000488905 ABCB9Q9NP78 766 aa15.11■□□□□ 0.01
HDAC6-231ENST00000488905 SNTG1Q9NSN8 517 aa15.11■□□□□ 0.01
HDAC6-231ENST00000488905 HAO2Q9NYQ3 351 aa15.11■□□□□ 0.01
HDAC6-231ENST00000488905 MPC1Q9Y5U8 109 aa15.11■□□□□ 0.01
HDAC6-231ENST00000488905 TMEM210A6NLX4 147 aa15.1■□□□□ 0.01
HDAC6-231ENST00000488905 GLCEO94923 617 aa15.1■□□□□ 0.01
HDAC6-231ENST00000488905 H2BFMP0C1H6 154 aa15.1■□□□□ 0.01
HDAC6-231ENST00000488905 ACKR3P25106 362 aa15.1■□□□□ 0.01
HDAC6-231ENST00000488905 PRDX4Q13162 271 aa15.1■□□□□ 0.01
HDAC6-231ENST00000488905 OR2T5Q6IEZ7 315 aa15.1■□□□□ 0.01
HDAC6-231ENST00000488905 TIGD4Q8IY51 512 aa15.1■□□□□ 0.01
HDAC6-231ENST00000488905 IQCF1Q8N6M8 205 aa15.1■□□□□ 0.01
HDAC6-231ENST00000488905 OR2T29Q8NH02 315 aa15.1■□□□□ 0.01
HDAC6-231ENST00000488905 RPL3LQ92901 407 aaKnown RBP15.1■□□□□ 0.01
HDAC6-231ENST00000488905 OTULINQ96BN8 352 aa15.1■□□□□ 0.01
HDAC6-231ENST00000488905 GAFA1Q96PS6 74 aa15.1■□□□□ 0.01
HDAC6-231ENST00000488905 NIPSNAP1Q9BPW8 284 aa15.1■□□□□ 0.01
HDAC6-231ENST00000488905 A0A1W2PRD5 423 aa15.09■□□□□ 0.01
HDAC6-231ENST00000488905 A0A1W2PRF3 423 aa15.09■□□□□ 0.01
HDAC6-231ENST00000488905 A0A1W2PRM7 423 aa15.09■□□□□ 0.01
HDAC6-231ENST00000488905 ZNF850A8MQ14 1090 aa15.09■□□□□ 0.01
HDAC6-231ENST00000488905 TSPAN9O75954 239 aa15.09■□□□□ 0.01
HDAC6-231ENST00000488905 PAHP00439 452 aa15.09■□□□□ 0.01
HDAC6-231ENST00000488905 LYNP07948 512 aa15.09■□□□□ 0.01
HDAC6-231ENST00000488905 SAA4P35542 130 aa15.09■□□□□ 0.01
HDAC6-231ENST00000488905 C2orf68Q2NKX9 166 aa15.09■□□□□ 0.01
HDAC6-231ENST00000488905 LCN8Q6JVE9 175 aa15.09■□□□□ 0.01
HDAC6-231ENST00000488905 CD300LDQ6UXZ3 194 aa15.09■□□□□ 0.01
HDAC6-231ENST00000488905 ZNF788Q6ZQV5 615 aa15.09■□□□□ 0.01
HDAC6-231ENST00000488905 OR10G2Q8NGC3 310 aa15.09■□□□□ 0.01
HDAC6-231ENST00000488905 OR5R1Q8NH85 324 aa15.09■□□□□ 0.01
HDAC6-231ENST00000488905 HPSE2Q8WWQ2 592 aa15.09■□□□□ 0.01
HDAC6-231ENST00000488905 OR5P3Q8WZ94 311 aa15.09■□□□□ 0.01
HDAC6-231ENST00000488905 TNFRSF14Q92956 283 aa15.09■□□□□ 0.01
HDAC6-231ENST00000488905 SLC25A10Q9UBX3 287 aaPredicted RBP15.09■□□□□ 0.01
HDAC6-231ENST00000488905 ZNF391Q9UJN7 358 aa15.09■□□□□ 0.01
HDAC6-231ENST00000488905 H3BN98 237 aa15.08■□□□□ 0
HDAC6-231ENST00000488905 M0R1W7 72 aa15.08■□□□□ 0
HDAC6-231ENST00000488905 AKR7A2O43488 359 aa15.08■□□□□ 0
HDAC6-231ENST00000488905 DCTN3O75935 186 aa15.08■□□□□ 0
HDAC6-231ENST00000488905 CST4P01036 141 aa15.08■□□□□ 0
HDAC6-231ENST00000488905 TFF1P04155 84 aa15.08■□□□□ 0
HDAC6-231ENST00000488905 PAICSP22234 425 aaKnown RBP15.08■□□□□ 0
HDAC6-231ENST00000488905 TGFBR2P37173 567 aa15.08■□□□□ 0
HDAC6-231ENST00000488905 EGR3Q06889 387 aa15.08■□□□□ 0
HDAC6-231ENST00000488905 DGUOKQ16854 277 aa15.08■□□□□ 0
HDAC6-231ENST00000488905 NCR3LG1Q68D85 454 aa15.08■□□□□ 0
HDAC6-231ENST00000488905 KCTD8Q6ZWB6 473 aa15.08■□□□□ 0
HDAC6-231ENST00000488905 PNKDQ8N490 385 aa15.08■□□□□ 0
HDAC6-231ENST00000488905 OTOSQ8NHW6 89 aa15.08■□□□□ 0
HDAC6-231ENST00000488905 ANGPTL6Q8NI99 470 aa15.08■□□□□ 0
HDAC6-231ENST00000488905 FGF23Q9GZV9 251 aaPredicted RBP15.08■□□□□ 0
HDAC6-231ENST00000488905 MUC13Q9H3R2 512 aa15.08■□□□□ 0
HDAC6-231ENST00000488905 METTL8Q9H825 291 aaKnown RBP15.08■□□□□ 0
HDAC6-231ENST00000488905 ARL2BPQ9Y2Y0 163 aa15.08■□□□□ 0
HDAC6-231ENST00000488905 PLXNB1O43157 2135 aa15.07■□□□□ 0
HDAC6-231ENST00000488905 ZNF816-ZNF321PA0A0X1KG74 233 aa15.07■□□□□ 0
HDAC6-231ENST00000488905 A0A1W2PQ09 198 aa15.07■□□□□ 0
HDAC6-231ENST00000488905 MEIOCA2RUB1 952 aa15.07■□□□□ 0
HDAC6-231ENST00000488905 SIGLEC5O15389 551 aa15.07■□□□□ 0
HDAC6-231ENST00000488905 DCTDP32321 178 aa15.07■□□□□ 0
HDAC6-231ENST00000488905 UBE2E1P51965 193 aa15.07■□□□□ 0
HDAC6-231ENST00000488905 CAV3P56539 151 aa15.07■□□□□ 0
HDAC6-231ENST00000488905 PSMA6P60900 246 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms