RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 GMDSO60547 372 aa10.88□□□□□ -0.67
HDAC6-229ENST00000486665 RGS9O75916 674 aaPredicted RBP10.88□□□□□ -0.67
HDAC6-229ENST00000486665 HLA-DPB1P04440 258 aa10.88□□□□□ -0.67
HDAC6-229ENST00000486665 NAT2P11245 290 aa10.88□□□□□ -0.67
HDAC6-229ENST00000486665 DNASE1P24855 282 aa10.88□□□□□ -0.67
HDAC6-229ENST00000486665 PSMA1P25786 263 aaKnown RBP10.88□□□□□ -0.67
HDAC6-229ENST00000486665 BLMHQ13867 455 aa10.88□□□□□ -0.67
HDAC6-229ENST00000486665 UBE2V2Q15819 145 aa10.88□□□□□ -0.67
HDAC6-229ENST00000486665 ZBTB37Q5TC79 503 aa10.88□□□□□ -0.67
HDAC6-229ENST00000486665 TMEM42Q69YG0 159 aa10.88□□□□□ -0.67
HDAC6-229ENST00000486665 C11orf71Q6IPW1 123 aa10.88□□□□□ -0.67
HDAC6-229ENST00000486665 PAMR1Q6UXH9 720 aa10.88□□□□□ -0.67
HDAC6-229ENST00000486665 MOB3CQ70IA8 216 aa10.88□□□□□ -0.67
HDAC6-229ENST00000486665 GPR141Q7Z602 305 aa10.88□□□□□ -0.67
HDAC6-229ENST00000486665 SATL1Q86VE3 508 aa10.88□□□□□ -0.67
HDAC6-229ENST00000486665 ZCCHC24Q8N2G6 241 aaKnown RBP10.88□□□□□ -0.67
HDAC6-229ENST00000486665 PARP16Q8N5Y8 322 aa10.88□□□□□ -0.67
HDAC6-229ENST00000486665 RPL3LQ92901 407 aaKnown RBP10.88□□□□□ -0.67
HDAC6-229ENST00000486665 DVL3Q92997 716 aaPredicted RBP10.88□□□□□ -0.67
HDAC6-229ENST00000486665 TMEM106AQ96A25 262 aa10.88□□□□□ -0.67
HDAC6-229ENST00000486665 FUNDC2Q9BWH2 189 aa10.88□□□□□ -0.67
HDAC6-229ENST00000486665 FGF23Q9GZV9 251 aaPredicted RBP10.88□□□□□ -0.67
HDAC6-229ENST00000486665 NAA50Q9GZZ1 169 aaKnown RBP10.88□□□□□ -0.67
HDAC6-229ENST00000486665 RNF167Q9H6Y7 350 aa10.88□□□□□ -0.67
HDAC6-229ENST00000486665 GPR173Q9NS66 373 aa10.88□□□□□ -0.67
HDAC6-229ENST00000486665 TMEM100Q9NV29 134 aa10.88□□□□□ -0.67
HDAC6-229ENST00000486665 MRPL15Q9P015 296 aaKnown RBP10.88□□□□□ -0.67
HDAC6-229ENST00000486665 STUB1Q9UNE7 303 aa10.88□□□□□ -0.67
HDAC6-229ENST00000486665 A0A1B0GWJ7 208 aa10.87□□□□□ -0.67
HDAC6-229ENST00000486665 MLNRO43193 412 aa10.87□□□□□ -0.67
HDAC6-229ENST00000486665 SPRY3O43610 288 aa10.87□□□□□ -0.67
HDAC6-229ENST00000486665 GATBO75879 557 aaKnown RBP10.87□□□□□ -0.67
HDAC6-229ENST00000486665 SERPINA3P01011 423 aa10.87□□□□□ -0.67
HDAC6-229ENST00000486665 ZNF20P17024 532 aa10.87□□□□□ -0.67
HDAC6-229ENST00000486665 GNALP38405 381 aa10.87□□□□□ -0.67
HDAC6-229ENST00000486665 PRDX4Q13162 271 aa10.87□□□□□ -0.67
HDAC6-229ENST00000486665 MOGQ16653 247 aa10.87□□□□□ -0.67
HDAC6-229ENST00000486665 NKPD1Q17RQ9 610 aa10.87□□□□□ -0.67
HDAC6-229ENST00000486665 CLVS2Q5SYC1 327 aa10.87□□□□□ -0.67
HDAC6-229ENST00000486665 GPR107Q5VW38 600 aa10.87□□□□□ -0.67
HDAC6-229ENST00000486665 DTX2Q86UW9 622 aa10.87□□□□□ -0.67
HDAC6-229ENST00000486665 UBASH3BQ8TF42 649 aa10.87□□□□□ -0.67
HDAC6-229ENST00000486665 PIGTQ969N2 578 aa10.87□□□□□ -0.67
HDAC6-229ENST00000486665 ITFG2Q969R8 447 aa10.87□□□□□ -0.67
HDAC6-229ENST00000486665 C10orf35Q96D05 121 aa10.87□□□□□ -0.67
HDAC6-229ENST00000486665 MBD6Q96DN6 1003 aa10.87□□□□□ -0.67
HDAC6-229ENST00000486665 CHCHD6Q9BRQ6 235 aa10.87□□□□□ -0.67
HDAC6-229ENST00000486665 TRAF4Q9BUZ4 470 aaPredicted RBP10.87□□□□□ -0.67
HDAC6-229ENST00000486665 ZCCHC4Q9H5U6 513 aa10.87□□□□□ -0.67
HDAC6-229ENST00000486665 CBLN4Q9NTU7 201 aa10.87□□□□□ -0.67
HDAC6-229ENST00000486665 TXNL4BQ9NX01 149 aaKnown RBP10.87□□□□□ -0.67
HDAC6-229ENST00000486665 TAS2R4Q9NYW5 299 aa10.87□□□□□ -0.67
HDAC6-229ENST00000486665 PLCE1Q9P212 2302 aa10.87□□□□□ -0.67
HDAC6-229ENST00000486665 ZANQ9Y493 2812 aa10.87□□□□□ -0.67
HDAC6-229ENST00000486665 TRAV8-7A0A075B6U6 113 aa10.86□□□□□ -0.67
HDAC6-229ENST00000486665 IGKV1-9A0A0C4DH69 117 aa10.86□□□□□ -0.67
HDAC6-229ENST00000486665 LOC100506127A0A0U1RQW1 187 aa10.86□□□□□ -0.67
HDAC6-229ENST00000486665 NRASP01111 189 aa10.86□□□□□ -0.67
HDAC6-229ENST00000486665 UCHL1P09936 223 aa10.86□□□□□ -0.67
HDAC6-229ENST00000486665 IGFBP3P17936 291 aaPredicted RBP10.86□□□□□ -0.67
HDAC6-229ENST00000486665 ATF1P18846 271 aa10.86□□□□□ -0.67
HDAC6-229ENST00000486665 ZNF81P51508 661 aa10.86□□□□□ -0.67
HDAC6-229ENST00000486665 LSM3P62310 102 aaKnown RBP10.86□□□□□ -0.67
HDAC6-229ENST00000486665 SPRNQ5BIV9 151 aa10.86□□□□□ -0.67
HDAC6-229ENST00000486665 CEP78Q5JTW2 689 aa10.86□□□□□ -0.67
HDAC6-229ENST00000486665 AGAP6Q5VW22 663 aa10.86□□□□□ -0.67
HDAC6-229ENST00000486665 C22orf42Q6IC83 251 aa10.86□□□□□ -0.67
HDAC6-229ENST00000486665 ZNF529Q6P280 563 aa10.86□□□□□ -0.67
HDAC6-229ENST00000486665 SLC16A12Q6ZSM3 486 aa10.86□□□□□ -0.67
HDAC6-229ENST00000486665 RNF144BQ7Z419 303 aa10.86□□□□□ -0.67
HDAC6-229ENST00000486665 SERPINA12Q8IW75 414 aa10.86□□□□□ -0.67
HDAC6-229ENST00000486665 OR13G1Q8NGZ3 307 aa10.86□□□□□ -0.67
HDAC6-229ENST00000486665 CENPOQ9BU64 300 aa10.86□□□□□ -0.67
HDAC6-229ENST00000486665 PAPOLGQ9BWT3 736 aaKnown RBP10.86□□□□□ -0.67
HDAC6-229ENST00000486665 PLEKHA1Q9HB21 404 aa10.86□□□□□ -0.67
HDAC6-229ENST00000486665 EXOSC4Q9NPD3 245 aaKnown RBP10.86□□□□□ -0.67
HDAC6-229ENST00000486665 SSR3Q9UNL2 185 aa10.86□□□□□ -0.67
HDAC6-229ENST00000486665 LAMP3Q9UQV4 416 aa10.86□□□□□ -0.67
HDAC6-229ENST00000486665 MPC1Q9Y5U8 109 aa10.86□□□□□ -0.67
HDAC6-229ENST00000486665 FBN3Q75N90 2809 aa10.86□□□□□ -0.67
HDAC6-229ENST00000486665 PLSCR5A0PG75 271 aa10.85□□□□□ -0.67
HDAC6-229ENST00000486665 SHISA3A0PJX4 238 aa10.85□□□□□ -0.67
HDAC6-229ENST00000486665 C17orf100A8MU93 164 aa10.85□□□□□ -0.67
HDAC6-229ENST00000486665 F5H5P2 479 aa10.85□□□□□ -0.67
HDAC6-229ENST00000486665 AIREO43918 545 aa10.85□□□□□ -0.67
HDAC6-229ENST00000486665 IGHV1-46P01743 117 aa10.85□□□□□ -0.67
HDAC6-229ENST00000486665 RAF1P04049 648 aa10.85□□□□□ -0.67
HDAC6-229ENST00000486665 CD2P06729 351 aa10.85□□□□□ -0.67
HDAC6-229ENST00000486665 FOSL1P15407 271 aa10.85□□□□□ -0.67
HDAC6-229ENST00000486665 GALP22466 123 aa10.85□□□□□ -0.67
HDAC6-229ENST00000486665 FGF9P31371 208 aaPredicted RBP10.85□□□□□ -0.67
HDAC6-229ENST00000486665 THBS2P35442 1172 aa10.85□□□□□ -0.67
HDAC6-229ENST00000486665 TGFBR1P36897 503 aa10.85□□□□□ -0.67
HDAC6-229ENST00000486665 SNRPD2P62316 118 aaKnown RBP10.85□□□□□ -0.67
HDAC6-229ENST00000486665 OR8G1Q15617 311 aa10.85□□□□□ -0.67
HDAC6-229ENST00000486665 DEFB113Q30KQ7 82 aa10.85□□□□□ -0.67
HDAC6-229ENST00000486665 HSD17B12Q53GQ0 312 aa10.85□□□□□ -0.67
HDAC6-229ENST00000486665 PLCXD3Q63HM9 321 aa10.85□□□□□ -0.67
HDAC6-229ENST00000486665 UTS2BQ765I0 119 aa10.85□□□□□ -0.67
HDAC6-229ENST00000486665 ANKRD13BQ86YJ7 626 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms