RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 DHDHQ9UQ10 334 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 N6AMT1Q9Y5N5 214 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 HRNRQ86YZ3 2850 aaPredicted RBP5.73□□□□□ -1.49
USP48-208ENST00000479177 CENPEQ02224 2701 aa5.73□□□□□ -1.49
USP48-208ENST00000479177 TENM4Q6N022 2769 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 HCFC1P51610 2035 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 ICE1Q9Y2F5 2266 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 TRAV1-2A0A0B4J238 106 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 IGHV2OR16-5A0A0B4J2B6 119 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 LOC390937A0A1W2PQ73 354 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 DHRS7CA6NNS2 312 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 XRCC2O43543 280 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 SYT7O43581 403 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 LMX1BO60663 402 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 SMPD2O60906 423 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 ARL6IP5O75915 188 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 RAF1P04049 648 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 CLEC2LP0C7M8 214 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 ZNF35P13682 527 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 PPP3CBP16298 524 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 ZNF182P17025 639 aaPredicted RBP5.72□□□□□ -1.49
USP48-208ENST00000479177 AGAP20933 346 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 CCNOP22674 350 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 MYL9P24844 172 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 CALRP27797 417 aaKnown RBP5.72□□□□□ -1.49
USP48-208ENST00000479177 CALCRP30988 508 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 SDC2P34741 201 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 ZNF83P51522 516 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 SORDQ00796 357 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 TFF3Q07654 80 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 TNK1Q13470 666 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 HSD17B12Q53GQ0 312 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 ASPHD2Q6ICH7 369 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 DOK3Q7L591 496 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 SSX8Q7RTT4 187 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 COMMD2Q86X83 199 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 ZNF101Q8IZC7 436 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 CCDC54Q8NEL0 328 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 OR14K1Q8NGZ2 314 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 OR2AE1Q8NHA4 323 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 ITLN2Q8WWU7 325 aaPredicted RBP5.72□□□□□ -1.49
USP48-208ENST00000479177 AKAP1Q92667 903 aaKnown RBP eCLIP5.72□□□□□ -1.49
USP48-208ENST00000479177 TMEM106AQ96A25 262 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 SGK3Q96BR1 496 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 ORAI1Q96D31 301 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 MUCL1Q96DR8 90 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 REEP6Q96HR9 211 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 DCUN1D5Q9BTE7 237 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 C1QTNF6Q9BXI9 259 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 POFUT1Q9H488 388 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 RGCCQ9H4X1 137 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 ZNF275Q9NSD4 429 aaPredicted RBP5.72□□□□□ -1.49
USP48-208ENST00000479177 CCDC59Q9P031 241 aaKnown RBP5.72□□□□□ -1.49
USP48-208ENST00000479177 GSTK1Q9Y2Q3 226 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 V9GYS6 101 aa5.72□□□□□ -1.49
USP48-208ENST00000479177 COL12A1Q99715 3063 aa5.71□□□□□ -1.49
USP48-208ENST00000479177 PTPN13Q12923 2485 aa5.71□□□□□ -1.49
USP48-208ENST00000479177 UTP20O75691 2785 aaKnown RBP5.71□□□□□ -1.5
USP48-208ENST00000479177 TRAV8-7A0A075B6U6 113 aa5.71□□□□□ -1.5
USP48-208ENST00000479177 A0A0G2JK05 382 aa5.71□□□□□ -1.5
USP48-208ENST00000479177 A0A1W2PPK0 400 aa5.71□□□□□ -1.5
USP48-208ENST00000479177 M0R1B8 84 aa5.71□□□□□ -1.5
USP48-208ENST00000479177 ZG16O60844 167 aa5.71□□□□□ -1.5
USP48-208ENST00000479177 DHRS3O75911 302 aa5.71□□□□□ -1.5
USP48-208ENST00000479177 CDRT1O95170 752 aa5.71□□□□□ -1.5
USP48-208ENST00000479177 NGFP01138 241 aa5.71□□□□□ -1.5
USP48-208ENST00000479177 IL1AP01583 271 aa5.71□□□□□ -1.5
USP48-208ENST00000479177 CD2P06729 351 aa5.71□□□□□ -1.5
USP48-208ENST00000479177 ZNF12P17014 697 aa5.71□□□□□ -1.5
USP48-208ENST00000479177 ZNF20P17024 532 aa5.71□□□□□ -1.5
USP48-208ENST00000479177 IGFBP3P17936 291 aaPredicted RBP5.71□□□□□ -1.5
USP48-208ENST00000479177 ADRA2CP18825 462 aa5.71□□□□□ -1.5
USP48-208ENST00000479177 CFL1P23528 166 aaKnown RBP5.71□□□□□ -1.5
USP48-208ENST00000479177 ACKR3P25106 362 aa5.71□□□□□ -1.5
USP48-208ENST00000479177 RPS19P39019 145 aaKnown RBP5.71□□□□□ -1.5
USP48-208ENST00000479177 FAM3AP98173 230 aa5.71□□□□□ -1.5
USP48-208ENST00000479177 NAAAQ02083 359 aa5.71□□□□□ -1.5
USP48-208ENST00000479177 ZNF92Q03936 586 aa5.71□□□□□ -1.5
USP48-208ENST00000479177 GK2Q14410 553 aaPredicted RBP5.71□□□□□ -1.5
USP48-208ENST00000479177 OR8B8Q15620 311 aa5.71□□□□□ -1.5
USP48-208ENST00000479177 ZNF529Q6P280 563 aa5.71□□□□□ -1.5
USP48-208ENST00000479177 LRRTM1Q86UE6 522 aa5.71□□□□□ -1.5
USP48-208ENST00000479177 TPRA1Q86W33 373 aa5.71□□□□□ -1.5
USP48-208ENST00000479177 NR2C2APQ86WQ0 139 aa5.71□□□□□ -1.5
USP48-208ENST00000479177 ZNF808Q8N4W9 903 aaPredicted RBP5.71□□□□□ -1.5
USP48-208ENST00000479177 PARP16Q8N5Y8 322 aa5.71□□□□□ -1.5
USP48-208ENST00000479177 CA5BP1Q8WTZ4 195 aa5.71□□□□□ -1.5
USP48-208ENST00000479177 SLC25A46Q96AG3 418 aa5.71□□□□□ -1.5
USP48-208ENST00000479177 MBD6Q96DN6 1003 aa5.71□□□□□ -1.5
USP48-208ENST00000479177 ADAT3Q96EY9 351 aaPredicted RBP5.71□□□□□ -1.5
USP48-208ENST00000479177 DACH2Q96NX9 599 aa5.71□□□□□ -1.5
USP48-208ENST00000479177 GFI1Q99684 422 aa5.71□□□□□ -1.5
USP48-208ENST00000479177 BARHL1Q9BZE3 327 aa5.71□□□□□ -1.5
USP48-208ENST00000479177 SLIRPQ9GZT3 109 aaKnown RBP5.71□□□□□ -1.5
USP48-208ENST00000479177 OR51B6Q9H340 312 aa5.71□□□□□ -1.5
USP48-208ENST00000479177 OPA3Q9H6K4 179 aa5.71□□□□□ -1.5
USP48-208ENST00000479177 KCNJ16Q9NPI9 418 aa5.71□□□□□ -1.5
USP48-208ENST00000479177 SNTG1Q9NSN8 517 aa5.71□□□□□ -1.5
USP48-208ENST00000479177 TBCCD1Q9NVR7 557 aa5.71□□□□□ -1.5
USP48-208ENST00000479177 TAS2R4Q9NYW5 299 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms