RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 SYT7O43581 403 aa5.81□□□□□ -1.48
BRCA1-215ENST00000478531 MTRF1O75570 445 aaKnown RBP5.81□□□□□ -1.48
BRCA1-215ENST00000478531 IGHV4-31P0DP07 118 aa5.81□□□□□ -1.48
BRCA1-215ENST00000478531 IRF2P14316 349 aa5.81□□□□□ -1.48
BRCA1-215ENST00000478531 MYL12AP19105 171 aa5.81□□□□□ -1.48
BRCA1-215ENST00000478531 KIR3DL2P43630 455 aa5.81□□□□□ -1.48
BRCA1-215ENST00000478531 ETV1P50549 477 aa5.81□□□□□ -1.48
BRCA1-215ENST00000478531 GPM6AP51674 278 aa5.81□□□□□ -1.48
BRCA1-215ENST00000478531 NANOS3P60323 173 aaKnown RBP5.81□□□□□ -1.48
BRCA1-215ENST00000478531 BTG1P62324 171 aa5.81□□□□□ -1.48
BRCA1-215ENST00000478531 CSNK2BP67870 215 aa5.81□□□□□ -1.48
BRCA1-215ENST00000478531 MZT1Q08AG7 82 aa5.81□□□□□ -1.48
BRCA1-215ENST00000478531 RIPPLY1Q0D2K3 151 aa5.81□□□□□ -1.48
BRCA1-215ENST00000478531 RIPK1Q13546 671 aa5.81□□□□□ -1.48
BRCA1-215ENST00000478531 ZMYND11Q15326 602 aa5.81□□□□□ -1.48
BRCA1-215ENST00000478531 SNCBQ16143 134 aa5.81□□□□□ -1.48
BRCA1-215ENST00000478531 FAM201AQ5SY85 155 aa5.81□□□□□ -1.48
BRCA1-215ENST00000478531 PLCXD3Q63HM9 321 aa5.81□□□□□ -1.48
BRCA1-215ENST00000478531 AHSA2Q719I0 299 aa5.81□□□□□ -1.48
BRCA1-215ENST00000478531 KCTD20Q7Z5Y7 419 aa5.81□□□□□ -1.48
BRCA1-215ENST00000478531 RDH10Q8IZV5 341 aa5.81□□□□□ -1.48
BRCA1-215ENST00000478531 CELF2-AS1Q8N7Q2 184 aa5.81□□□□□ -1.48
BRCA1-215ENST00000478531 C19orf18Q8NEA5 215 aa5.81□□□□□ -1.48
BRCA1-215ENST00000478531 OR11L1Q8NGX0 322 aa5.81□□□□□ -1.48
BRCA1-215ENST00000478531 OR2G2Q8NGZ5 317 aa5.81□□□□□ -1.48
BRCA1-215ENST00000478531 ITPKCQ96DU7 683 aa5.81□□□□□ -1.48
BRCA1-215ENST00000478531 MICU1Q9BPX6 476 aa5.81□□□□□ -1.48
BRCA1-215ENST00000478531 RTL8AQ9BWD3 113 aa5.81□□□□□ -1.48
BRCA1-215ENST00000478531 FN3KRPQ9HA64 309 aa5.81□□□□□ -1.48
BRCA1-215ENST00000478531 LPAR2Q9HBW0 351 aa5.81□□□□□ -1.48
BRCA1-215ENST00000478531 C14orf119Q9NWQ9 140 aa5.81□□□□□ -1.48
BRCA1-215ENST00000478531 C1orf123Q9NWV4 160 aa5.81□□□□□ -1.48
BRCA1-215ENST00000478531 ENPP5Q9UJA9 477 aa5.81□□□□□ -1.48
BRCA1-215ENST00000478531 NPTNQ9Y639 398 aa5.81□□□□□ -1.48
BRCA1-215ENST00000478531 HSPE1-MOB4S4R3N1 261 aa5.81□□□□□ -1.48
BRCA1-215ENST00000478531 IRGMA1A4Y4 181 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 TRIM64CA6NLI5 447 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 H0YJX3 145 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 TMEM178BH3BS89 294 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 CD5LO43866 347 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 LMX1BO60663 402 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 IGLV3-1P01715 115 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 IGHV2-70P01814 119 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 UBCP0CG48 685 aaKnown RBP5.8□□□□□ -1.48
BRCA1-215ENST00000478531 LIMS3P0CW19 117 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 LIMS4P0CW20 117 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 DCKP27707 260 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 THBS2P35442 1172 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 PMELP40967 661 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 GATA4P43694 442 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 HSPA13P48723 471 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 GMFBP60983 142 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 ST3GAL4Q11206 333 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 ZNF154Q13106 437 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 OR2G6Q5TZ20 316 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 LAIR2Q6ISS4 152 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 ZNF826PQ6ZT77 177 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 DOK3Q7L591 496 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 WDR86Q86TI4 376 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 KLBQ86Z14 1044 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 C1orf87Q8N0U7 546 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 STX19Q8N4C7 294 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 ZNF676Q8N7Q3 588 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 SPERTQ8NA61 448 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 NPRL2Q8WTW4 380 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 HPSE2Q8WWQ2 592 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 GGHQ92820 318 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 HPS1Q92902 700 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 RNF166Q96A37 237 aaPredicted RBP5.8□□□□□ -1.48
BRCA1-215ENST00000478531 MSI2Q96DH6 328 aaKnown RBP5.8□□□□□ -1.48
BRCA1-215ENST00000478531 TMEM80Q96HE8 168 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 CNBD2Q96M20 576 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 HIST1H2AAQ96QV6 131 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 ZNF665Q9H7R5 613 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 FGF20Q9NP95 211 aaPredicted RBP5.8□□□□□ -1.48
BRCA1-215ENST00000478531 YAE1D1Q9NRH1 226 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 GPR173Q9NS66 373 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 MRPS18AQ9NVS2 196 aaKnown RBP5.8□□□□□ -1.48
BRCA1-215ENST00000478531 FRRS1LQ9P0K9 344 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 PCDHB10Q9UN67 800 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 DIMT1Q9UNQ2 313 aaKnown RBP5.8□□□□□ -1.48
BRCA1-215ENST00000478531 MPC1Q9Y5U8 109 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 A0A1B0GTI1 187 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 EFCAB10A6NFE3 127 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 INAFM1C9JVW0 142 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 E9PI62 339 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 IFNL4K9M1U5 179 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 CST4P01036 141 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 NRASP01111 189 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 TGFAP01135 160 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 ATP6V1B1P15313 513 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 CD80P33681 288 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 VHLP40337 213 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 MDH2P40926 338 aaKnown RBP5.8□□□□□ -1.48
BRCA1-215ENST00000478531 GZMKP49863 264 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 GTF2A1P52655 376 aaPredicted RBP5.8□□□□□ -1.48
BRCA1-215ENST00000478531 GBX2P52951 348 aaPredicted RBP5.8□□□□□ -1.48
BRCA1-215ENST00000478531 CDH15P55291 814 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 MED21Q13503 144 aa5.8□□□□□ -1.48
BRCA1-215ENST00000478531 CYB5R2Q6BCY4 276 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms